| Literature DB >> 21202089 |
Hoong-Kun Fun, Samuel Robinson Jebas, A Sinthiya.
Abstract
The asymmetric unit of the title compound, C(5)H(7)N(2) (+)·C(6)H(6)NO(3)S(-)·C(6)H(7)NO(3)S·H(2)O, contains one 4-ammonio-benzene-sulfonate zwitterion ((+)H(3)NC(6)H(4)SO(3) (-)), one 4-amino-benzene-sulfonate anion (H(2)NC(6)H(4)SO(3) (-)), one 4-amino-pyridinium cation and two half-mol-ecules of water, each lying on a twofold rotation axis. The various ions and molecules in the structure are linked through N-H⋯O, N-H⋯N and N-H⋯S hydrogen bonds and C-H-π inter-actions into a three-dimensional framework.Entities:
Year: 2008 PMID: 21202089 PMCID: PMC2960977 DOI: 10.1107/S1600536808006259
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C5H7N2+·C6H6NO3S–·C6H7NO3S·H2O | |
| Monoclinic, | Mo |
| Hall symbol: C 2y | Cell parameters from 6986 reflections |
| θ = 2.7–35.1º | |
| µ = 0.32 mm−1 | |
| β = 115.415 (1)º | Plate, yellow |
| 0.35 × 0.18 × 0.08 mm | |
| Bruker SMART APEXII CCD area-detector diffractometer | |
| φ and ω scans | θmax = 36.2º |
| Absorption correction: multi-scan(SADABS; Bruker, 2005) | θmin = 1.5º |
| 30055 measured reflections | |
| 9157 independent reflections | |
| 7528 reflections with |
| Refinement on | H-atom parameters constrained |
| Least-squares matrix: full | |
| (Δ/σ)max = 0.001 | |
| Δρmax = 0.43 e Å−3 | |
| Δρmin = −0.66 e Å−3 | |
| 9157 reflections | Extinction correction: none |
| 272 parameters | Absolute structure: Flack (1983), 4029 Friedel pairs |
| 6 restraints | Flack parameter: −0.01 (4) |
| Geometry. Experimental. The low-temperature data was collected with the Oxford Crysosystem Cobra low-temperature attachement.All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| S1 | 0.367717 (17) | 0.30668 (6) | −0.07087 (3) | 0.01197 (7) | |
| S2 | 0.349420 (17) | 1.00691 (6) | 0.42455 (3) | 0.01122 (7) | |
| O1 | 0.41498 (6) | 0.4675 (2) | −0.06022 (10) | 0.0217 (3) | |
| O2 | 0.31451 (5) | 0.3430 (2) | −0.16138 (8) | 0.0158 (2) | |
| O3 | 0.38660 (5) | 0.0621 (2) | −0.06024 (9) | 0.0157 (2) | |
| O4 | 0.39347 (5) | 0.8372 (2) | 0.42552 (8) | 0.0146 (2) | |
| O5 | 0.29296 (5) | 0.9811 (2) | 0.33955 (8) | 0.0147 (2) | |
| O6 | 0.37175 (5) | 1.2447 (2) | 0.43941 (8) | 0.0148 (2) | |
| N1 | 0.30210 (6) | 0.5120 (3) | 0.25477 (10) | 0.0144 (2) | |
| H1N1 | 0.33 | 0.456 | 0.3111 | 0.017* | |
| H2N1 | 0.2963 | 0.6634 | 0.263 | 0.017* | |
| N2 | 0.30594 (6) | 0.8065 (3) | 0.77520 (9) | 0.0129 (2) | |
| H1N2 | 0.3084 | 0.6527 | 0.7875 | 0.016* | |
| H2N2 | 0.2691 | 0.8528 | 0.7635 | 0.016* | |
| H3N2 | 0.3364 | 0.8664 | 0.8275 | 0.016* | |
| N3 | 0.50936 (7) | 0.5548 (3) | 0.15575 (11) | 0.0228 (3) | |
| H1N3 | 0.5201 | 0.5786 | 0.1072 | 0.027* | |
| N4 | 0.46259 (7) | 0.4675 (3) | 0.38104 (11) | 0.0205 (3) | |
| H4A | 0.4406 | 0.5691 | 0.3911 | 0.025* | |
| H4B | 0.4742 | 0.3462 | 0.4175 | 0.025* | |
| C1 | 0.34758 (7) | 0.3645 (3) | 0.02502 (11) | 0.0106 (3) | |
| C2 | 0.35850 (7) | 0.2020 (3) | 0.09866 (11) | 0.0142 (3) | |
| H2A | 0.3759 | 0.0601 | 0.0969 | 0.017* | |
| C3 | 0.34344 (8) | 0.2509 (3) | 0.17467 (12) | 0.0145 (3) | |
| H3A | 0.3507 | 0.1414 | 0.2236 | 0.017* | |
| C4 | 0.31746 (7) | 0.4633 (3) | 0.17813 (11) | 0.0120 (3) | |
| C5 | 0.30432 (7) | 0.6223 (3) | 0.10179 (12) | 0.0142 (3) | |
| H5A | 0.2852 | 0.7612 | 0.1017 | 0.017* | |
| C6 | 0.31977 (7) | 0.5733 (3) | 0.02616 (12) | 0.0145 (3) | |
| H6A | 0.3115 | 0.6805 | −0.0239 | 0.017* | |
| C7 | 0.33669 (7) | 0.9400 (3) | 0.52796 (11) | 0.0110 (3) | |
| C8 | 0.35436 (7) | 0.7288 (3) | 0.57586 (12) | 0.0143 (3) | |
| H8A | 0.373 | 0.6182 | 0.554 | 0.017* | |
| C9 | 0.34381 (8) | 0.6843 (3) | 0.65743 (12) | 0.0144 (3) | |
| H9A | 0.3555 | 0.5438 | 0.6906 | 0.017* | |
| C10 | 0.31584 (7) | 0.8516 (3) | 0.68843 (11) | 0.0112 (3) | |
| C11 | 0.29681 (7) | 1.0617 (3) | 0.63989 (12) | 0.0132 (3) | |
| H11A | 0.2774 | 1.1707 | 0.661 | 0.016* | |
| C12 | 0.30754 (7) | 1.1049 (3) | 0.55864 (11) | 0.0133 (3) | |
| H12A | 0.2952 | 1.2443 | 0.5248 | 0.016* | |
| C13 | 0.47866 (7) | 0.4979 (3) | 0.30921 (12) | 0.0164 (3) | |
| C14 | 0.51422 (8) | 0.3311 (3) | 0.28971 (14) | 0.0211 (3) | |
| H14A | 0.5278 | 0.1998 | 0.3288 | 0.025* | |
| C15 | 0.52825 (8) | 0.3652 (4) | 0.21303 (14) | 0.0218 (4) | |
| H15A | 0.5513 | 0.2554 | 0.2002 | 0.026* | |
| C16 | 0.47601 (9) | 0.7162 (4) | 0.17268 (14) | 0.0244 (4) | |
| H16A | 0.4632 | 0.8455 | 0.1322 | 0.029* | |
| C17 | 0.46057 (8) | 0.6940 (4) | 0.24815 (13) | 0.0213 (4) | |
| H17A | 0.438 | 0.8089 | 0.2592 | 0.026* | |
| O1W | 0.5 | 1.0580 (4) | 0.5 | 0.0317 (5) | |
| H1W1 | 0.5296 | 0.9626 | 0.5253 | 0.048* | |
| O2W | 0.5 | −0.1247 (3) | 0 | 0.0196 (4) | |
| H1W2 | 0.4689 | −0.035 | −0.0196 | 0.029* |
| S1 | 0.01387 (17) | 0.01226 (16) | 0.01171 (16) | −0.00155 (13) | 0.00731 (14) | −0.00131 (13) |
| S2 | 0.01273 (17) | 0.01111 (15) | 0.01161 (16) | −0.00077 (13) | 0.00692 (13) | −0.00047 (13) |
| O1 | 0.0231 (7) | 0.0258 (7) | 0.0228 (6) | −0.0136 (5) | 0.0160 (5) | −0.0090 (5) |
| O2 | 0.0201 (6) | 0.0144 (6) | 0.0110 (5) | 0.0003 (4) | 0.0048 (4) | 0.0008 (4) |
| O3 | 0.0170 (6) | 0.0153 (5) | 0.0146 (5) | 0.0045 (4) | 0.0067 (5) | −0.0004 (4) |
| O4 | 0.0150 (5) | 0.0149 (6) | 0.0170 (5) | 0.0016 (4) | 0.0097 (5) | −0.0016 (4) |
| O5 | 0.0145 (5) | 0.0175 (6) | 0.0109 (5) | −0.0005 (4) | 0.0042 (4) | −0.0014 (4) |
| O6 | 0.0190 (6) | 0.0116 (5) | 0.0156 (5) | −0.0025 (4) | 0.0091 (5) | −0.0001 (4) |
| N1 | 0.0188 (6) | 0.0133 (6) | 0.0140 (6) | 0.0011 (5) | 0.0097 (5) | −0.0005 (5) |
| N2 | 0.0156 (6) | 0.0125 (5) | 0.0113 (5) | −0.0002 (5) | 0.0064 (5) | 0.0001 (5) |
| N3 | 0.0204 (8) | 0.0333 (9) | 0.0189 (7) | −0.0037 (6) | 0.0123 (6) | −0.0033 (6) |
| N4 | 0.0241 (8) | 0.0220 (8) | 0.0209 (7) | 0.0005 (6) | 0.0150 (6) | −0.0014 (5) |
| C1 | 0.0105 (6) | 0.0109 (6) | 0.0104 (6) | −0.0007 (5) | 0.0045 (5) | −0.0002 (5) |
| C2 | 0.0176 (8) | 0.0123 (6) | 0.0144 (7) | 0.0022 (5) | 0.0085 (6) | 0.0015 (5) |
| C3 | 0.0195 (8) | 0.0118 (6) | 0.0148 (7) | 0.0020 (5) | 0.0097 (6) | 0.0029 (5) |
| C4 | 0.0118 (7) | 0.0128 (7) | 0.0125 (6) | −0.0011 (5) | 0.0063 (6) | −0.0010 (5) |
| C5 | 0.0168 (8) | 0.0116 (6) | 0.0157 (7) | 0.0009 (5) | 0.0085 (6) | 0.0004 (5) |
| C6 | 0.0182 (8) | 0.0127 (6) | 0.0135 (7) | 0.0015 (6) | 0.0074 (6) | 0.0014 (5) |
| C7 | 0.0116 (7) | 0.0112 (6) | 0.0110 (6) | −0.0004 (5) | 0.0057 (5) | −0.0003 (5) |
| C8 | 0.0176 (8) | 0.0119 (6) | 0.0149 (7) | 0.0032 (6) | 0.0087 (6) | 0.0014 (5) |
| C9 | 0.0178 (8) | 0.0120 (6) | 0.0157 (7) | 0.0024 (5) | 0.0092 (6) | 0.0018 (5) |
| C10 | 0.0123 (7) | 0.0113 (6) | 0.0104 (6) | −0.0009 (5) | 0.0053 (5) | 0.0000 (5) |
| C11 | 0.0158 (7) | 0.0116 (6) | 0.0141 (7) | 0.0009 (5) | 0.0082 (6) | −0.0004 (5) |
| C12 | 0.0168 (7) | 0.0115 (6) | 0.0124 (7) | 0.0008 (5) | 0.0071 (6) | 0.0010 (5) |
| C13 | 0.0134 (7) | 0.0201 (7) | 0.0165 (7) | −0.0022 (6) | 0.0073 (6) | −0.0046 (6) |
| C14 | 0.0219 (9) | 0.0196 (8) | 0.0250 (9) | −0.0014 (7) | 0.0132 (7) | −0.0031 (7) |
| C15 | 0.0204 (9) | 0.0253 (9) | 0.0241 (9) | −0.0032 (7) | 0.0136 (7) | −0.0067 (7) |
| C16 | 0.0215 (9) | 0.0315 (10) | 0.0232 (9) | 0.0013 (8) | 0.0123 (8) | 0.0046 (8) |
| C17 | 0.0192 (9) | 0.0255 (9) | 0.0221 (9) | 0.0040 (7) | 0.0116 (7) | 0.0017 (7) |
| O1W | 0.0145 (9) | 0.0162 (9) | 0.0556 (14) | 0 | 0.0067 (9) | 0 |
| O2W | 0.0160 (8) | 0.0161 (8) | 0.0278 (10) | 0 | 0.0104 (7) | 0 |
| S1—O1 | 1.4531 (13) | C3—H3A | 0.93 |
| S1—O2 | 1.4604 (12) | C4—C5 | 1.400 (2) |
| S1—O3 | 1.4692 (13) | C5—C6 | 1.389 (2) |
| S1—C1 | 1.7651 (15) | C5—H5A | 0.93 |
| S2—O5 | 1.4548 (12) | C6—H6A | 0.93 |
| S2—O6 | 1.4570 (13) | C7—C8 | 1.386 (2) |
| S2—O4 | 1.4661 (12) | C7—C12 | 1.392 (2) |
| S2—C7 | 1.7737 (15) | C8—C9 | 1.397 (2) |
| N1—C4 | 1.4016 (19) | C8—H8A | 0.93 |
| N1—H1N1 | 0.90 | C9—C10 | 1.385 (2) |
| N1—H2N1 | 0.90 | C9—H9A | 0.93 |
| N2—C10 | 1.4650 (19) | C10—C11 | 1.388 (2) |
| N2—H1N2 | 0.90 | C11—C12 | 1.393 (2) |
| N2—H2N2 | 0.90 | C11—H11A | 0.93 |
| N2—H3N2 | 0.90 | C12—H12A | 0.93 |
| N3—C16 | 1.343 (3) | C13—C17 | 1.405 (3) |
| N3—C15 | 1.347 (3) | C13—C14 | 1.422 (2) |
| N3—H1N3 | 0.90 | C14—C15 | 1.367 (3) |
| N4—C13 | 1.326 (2) | C14—H14A | 0.93 |
| N4—H4A | 0.86 | C15—H15A | 0.93 |
| N4—H4B | 0.86 | C16—C17 | 1.364 (2) |
| C1—C6 | 1.391 (2) | C16—H16A | 0.93 |
| C1—C2 | 1.392 (2) | C17—H17A | 0.93 |
| C2—C3 | 1.388 (2) | O1W—H1W1 | 0.87 |
| C2—H2A | 0.93 | O2W—H1W2 | 0.87 |
| C3—C4 | 1.395 (2) | ||
| O1—S1—O2 | 112.46 (8) | C6—C5—C4 | 120.22 (15) |
| O1—S1—O3 | 112.88 (8) | C6—C5—H5A | 119.9 |
| O2—S1—O3 | 111.08 (7) | C4—C5—H5A | 119.9 |
| O1—S1—C1 | 107.12 (7) | C5—C6—C1 | 120.20 (14) |
| O2—S1—C1 | 106.46 (7) | C5—C6—H6A | 119.9 |
| O3—S1—C1 | 106.34 (7) | C1—C6—H6A | 119.9 |
| O5—S2—O6 | 113.23 (7) | C8—C7—C12 | 120.98 (14) |
| O5—S2—O4 | 112.27 (7) | C8—C7—S2 | 121.12 (12) |
| O6—S2—O4 | 112.74 (7) | C12—C7—S2 | 117.90 (12) |
| O5—S2—C7 | 106.85 (7) | C7—C8—C9 | 119.16 (15) |
| O6—S2—C7 | 105.57 (7) | C7—C8—H8A | 120.4 |
| O4—S2—C7 | 105.45 (7) | C9—C8—H8A | 120.4 |
| C4—N1—H1N1 | 109.9 | C10—C9—C8 | 119.31 (15) |
| C4—N1—H2N1 | 115.3 | C10—C9—H9A | 120.3 |
| H1N1—N1—H2N1 | 108.6 | C8—C9—H9A | 120.3 |
| C10—N2—H1N2 | 109.7 | C9—C10—C11 | 122.08 (14) |
| C10—N2—H2N2 | 108.9 | C9—C10—N2 | 119.21 (14) |
| H1N2—N2—H2N2 | 107.7 | C11—C10—N2 | 118.71 (14) |
| C10—N2—H3N2 | 108.7 | C10—C11—C12 | 118.26 (15) |
| H1N2—N2—H3N2 | 103.7 | C10—C11—H11A | 120.9 |
| H2N2—N2—H3N2 | 117.9 | C12—C11—H11A | 120.9 |
| C16—N3—C15 | 120.58 (15) | C7—C12—C11 | 120.19 (15) |
| C16—N3—H1N3 | 118.7 | C7—C12—H12A | 119.9 |
| C15—N3—H1N3 | 120.6 | C11—C12—H12A | 119.9 |
| C13—N4—H4A | 120 | N4—C13—C17 | 121.57 (16) |
| C13—N4—H4B | 120 | N4—C13—C14 | 121.31 (17) |
| H4A—N4—H4B | 120 | C17—C13—C14 | 117.11 (16) |
| C6—C1—C2 | 119.74 (14) | C15—C14—C13 | 119.51 (18) |
| C6—C1—S1 | 119.59 (12) | C15—C14—H14A | 120.2 |
| C2—C1—S1 | 120.67 (12) | C13—C14—H14A | 120.2 |
| C3—C2—C1 | 120.20 (15) | N3—C15—C14 | 121.31 (17) |
| C3—C2—H2A | 119.9 | N3—C15—H15A | 119.3 |
| C1—C2—H2A | 119.9 | C14—C15—H15A | 119.3 |
| C2—C3—C4 | 120.37 (15) | N3—C16—C17 | 121.27 (19) |
| C2—C3—H3A | 119.8 | N3—C16—H16A | 119.4 |
| C4—C3—H3A | 119.8 | C17—C16—H16A | 119.4 |
| C3—C4—C5 | 119.18 (14) | C16—C17—C13 | 120.20 (18) |
| C3—C4—N1 | 120.25 (14) | C16—C17—H17A | 119.9 |
| C5—C4—N1 | 120.50 (14) | C13—C17—H17A | 119.9 |
| O1—S1—C1—C6 | 68.17 (14) | O6—S2—C7—C12 | 45.63 (14) |
| O2—S1—C1—C6 | −52.35 (14) | O4—S2—C7—C12 | 165.19 (12) |
| O3—S1—C1—C6 | −170.88 (13) | C12—C7—C8—C9 | −1.5 (2) |
| O1—S1—C1—C2 | −112.74 (14) | S2—C7—C8—C9 | 179.53 (13) |
| O2—S1—C1—C2 | 126.73 (13) | C7—C8—C9—C10 | 0.2 (2) |
| O3—S1—C1—C2 | 8.21 (15) | C8—C9—C10—C11 | 1.2 (2) |
| C6—C1—C2—C3 | −2.1 (2) | C8—C9—C10—N2 | −178.73 (15) |
| S1—C1—C2—C3 | 178.85 (13) | C9—C10—C11—C12 | −1.3 (2) |
| C1—C2—C3—C4 | −0.2 (2) | N2—C10—C11—C12 | 178.68 (14) |
| C2—C3—C4—C5 | 2.8 (2) | C8—C7—C12—C11 | 1.4 (2) |
| C2—C3—C4—N1 | 179.77 (15) | S2—C7—C12—C11 | −179.55 (12) |
| C3—C4—C5—C6 | −3.2 (2) | C10—C11—C12—C7 | −0.1 (2) |
| N1—C4—C5—C6 | 179.86 (15) | N4—C13—C14—C15 | 177.91 (17) |
| C4—C5—C6—C1 | 1.0 (2) | C17—C13—C14—C15 | −1.1 (3) |
| C2—C1—C6—C5 | 1.7 (2) | C16—N3—C15—C14 | 0.0 (3) |
| S1—C1—C6—C5 | −179.22 (13) | C13—C14—C15—N3 | 0.4 (3) |
| O5—S2—C7—C8 | 103.83 (14) | C15—N3—C16—C17 | 0.3 (3) |
| O6—S2—C7—C8 | −135.36 (14) | N3—C16—C17—C13 | −1.1 (3) |
| O4—S2—C7—C8 | −15.81 (15) | N4—C13—C17—C16 | −177.60 (18) |
| O5—S2—C7—C12 | −75.17 (14) | C14—C13—C17—C16 | 1.4 (3) |
| H··· | ||||
| N4—H4B···O1Wi | 0.86 | 2.01 | 2.869 (2) | 179 |
| N2—H3N2···O3ii | 0.90 | 1.98 | 2.8542 (19) | 164 |
| N1—H1N1···O6i | 0.90 | 2.15 | 3.0111 (19) | 160 |
| N2—H1N2···O2iii | 0.90 | 1.92 | 2.8101 (19) | 168 |
| N2—H1N2···S1iii | 0.90 | 2.84 | 3.6066 (15) | 144 |
| N3—H1N3···O1iv | 0.90 | 2.13 | 2.879 (2) | 140 |
| N3—H1N3···O2Wv | 0.90 | 2.26 | 2.928 (2) | 131 |
| N2—H2N2···N1vi | 0.90 | 1.91 | 2.799 (2) | 168 |
| N4—H4A···O4 | 0.86 | 2.14 | 2.9929 (19) | 175 |
| N1—H2N1···O5 | 0.90 | 2.19 | 3.0386 (19) | 158 |
| O1W—H1W1···O4vii | 0.87 | 1.88 | 2.7189 (15) | 162 |
| O2W—H1W2···O3 | 0.87 | 1.96 | 2.7921 (14) | 160 |
| C12—H12A···Cg1vi | 0.93 | 2.96 | 3.614 (19) | 129 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N4—H4 | 0.86 | 2.01 | 2.869 (2) | 179 |
| N2—H3 | 0.90 | 1.98 | 2.8542 (19) | 164 |
| N1—H1 | 0.90 | 2.15 | 3.0111 (19) | 160 |
| N2—H1 | 0.90 | 1.92 | 2.8101 (19) | 168 |
| N2—H1 | 0.90 | 2.84 | 3.6066 (15) | 144 |
| N3—H1 | 0.90 | 2.13 | 2.879 (2) | 140 |
| N3—H1 | 0.90 | 2.26 | 2.928 (2) | 131 |
| N2—H2 | 0.90 | 1.91 | 2.799 (2) | 168 |
| N4—H4 | 0.86 | 2.14 | 2.9929 (19) | 175 |
| N1—H2 | 0.90 | 2.19 | 3.0386 (19) | 158 |
| O1 | 0.87 | 1.88 | 2.7189 (15) | 162 |
| O2 | 0.87 | 1.96 | 2.7921 (14) | 160 |
| C12—H12 | 0.93 | 2.96 | 3.614 (19) | 129 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) . Cg1 is the centroid of the C7–C12 benzene ring.