Literature DB >> 21201916

1-Methyl-4-[(E)-2-(2-thien-yl)ethen-yl]pyridinium 4-chloro-benzene-sulfonate.

Suchada Chantrapromma, Chotika Laksana, Pumsak Ruanwas, Hoong-Kun Fun.   

Abstract

In the title compound, C(12)H(12)NS(+)·C(6)H(4)ClO(3)S(-), the cation is almost planar and exists in the E configuration. The cations and anions form alternate layers parallel to the ab plane. Within each layer, both cations and anions form chains directed along the b axis. The mol-ecules are inter-connected by weak C-H⋯O inter-actions into a three-dimensional network. The crystal structure is further stabilized by C-H⋯π inter-actions involving the thio-phene ring. The sulfonate and thio-phene groups are involved in weak intra-molecular C-H⋯O and C-H⋯S inter-actions, respectively. The latter intra-molecular hydrogen bonds produce S(5) ring motifs.

Entities:  

Year:  2008        PMID: 21201916      PMCID: PMC2960744          DOI: 10.1107/S1600536808003929

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For bond lengths and angles, see Allen (2002 ▶); Allen et al. (1987 ▶). For related literature on hydrogen-bond motifs, see Bernstein et al. (1995 ▶). For related structures, see for example Chantrapromma et al. (2005 ▶, 2006a ▶,b ▶, 2007a ▶,b ▶,c ▶,d ▶); Drost et al. (1995 ▶); Jindawong et al. (2005 ▶); Subramaniyan et al. (2003 ▶).

Experimental

Crystal data

C12H12NSC6H4ClO3S M = 393.91 Monoclinic, a = 7.3532 (1) Å b = 14.0250 (2) Å c = 18.3755 (2) Å β = 111.232 (1)° V = 1766.41 (4) Å3 Z = 4 Mo Kα radiation μ = 0.47 mm−1 T = 100.0 (1) K 0.49 × 0.22 × 0.18 mm

Data collection

Bruker SMART APEX2 CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.883, T max = 0.919 23692 measured reflections 4688 independent reflections 3913 reflections with I > 2σ(I) R int = 0.037

Refinement

R[F 2 > 2σ(F 2)] = 0.037 wR(F 2) = 0.094 S = 1.06 4688 reflections 227 parameters H-atom parameters constrained Δρmax = 0.57 e Å−3 Δρmin = −0.42 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: APEX2; data reduction: SAINT (Bruker, 2005 ▶); program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2003 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808003929/fb2086sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808003929/fb2086Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C12H12NS+·C6H4ClO3SF000 = 816
Mr = 393.91Dx = 1.481 Mg m3
Monoclinic, P21/cMelting point = 503–505 K
Hall symbol: -P 2ybcMo Kα radiation λ = 0.71073 Å
a = 7.3532 (1) ÅCell parameters from 4688 reflections
b = 14.0250 (2) Åθ = 1.9–29.0º
c = 18.3755 (2) ŵ = 0.47 mm1
β = 111.232 (1)ºT = 100.0 (1) K
V = 1766.41 (4) Å3Block, brown
Z = 40.49 × 0.22 × 0.18 mm
Bruker SMART APEX2 CCD area-detector diffractometer4688 independent reflections
Radiation source: fine-focus sealed tube3913 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.037
Detector resolution: 8.33 pixels mm-1θmax = 29.0º
T = 100.0(1) Kθmin = 1.9º
ω scansh = −10→10
Absorption correction: multi-scan(SADABS; Bruker, 2005)k = −19→19
Tmin = 0.883, Tmax = 0.919l = −21→25
23692 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.037H-atom parameters constrained
wR(F2) = 0.094  w = 1/[σ2(Fo2) + (0.0415P)2 + 1.1208P] where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max = 0.001
4688 reflectionsΔρmax = 0.57 e Å3
227 parametersΔρmin = −0.42 e Å3
63 constraintsExtinction correction: none
Primary atom site location: difference Fourier map
Experimental. The low-temparture data was collected with the Oxford Cryosystem Cobra low-temperature attachment.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.57131 (7)0.72654 (3)0.43805 (3)0.02450 (11)
S21.05267 (5)0.60506 (3)0.27447 (2)0.01477 (10)
Cl10.37650 (6)0.31936 (3)0.25045 (2)0.02092 (10)
O11.09007 (17)0.58763 (9)0.20315 (7)0.0219 (3)
O21.21870 (16)0.58102 (9)0.34443 (7)0.0196 (3)
O30.97435 (17)0.69943 (8)0.27824 (7)0.0210 (3)
N10.8323 (2)1.24164 (11)0.49389 (9)0.0214 (3)
C10.6981 (3)1.10669 (14)0.41625 (11)0.0273 (4)
H1A0.63421.08080.36690.033*
C20.7408 (3)1.20156 (14)0.42351 (11)0.0265 (4)
H2A0.70601.23940.37900.032*
C30.8863 (3)1.18711 (14)0.55895 (11)0.0259 (4)
H3A0.95011.21500.60750.031*
C40.8481 (3)1.09132 (14)0.55424 (11)0.0267 (4)
H4A0.88811.05470.59950.032*
C50.7490 (2)1.04783 (13)0.48184 (11)0.0216 (3)
C60.6999 (3)0.94698 (14)0.47236 (11)0.0239 (4)
H6A0.62620.92520.42260.029*
C70.7537 (3)0.88364 (13)0.53044 (11)0.0227 (4)
H7A0.82680.90660.57990.027*
C80.7098 (2)0.78300 (13)0.52426 (10)0.0213 (3)
C90.7700 (2)0.72058 (12)0.58541 (10)0.0190 (3)
H9A0.84510.73790.63630.023*
C100.7037 (3)0.62467 (13)0.56186 (11)0.0234 (4)
H10A0.73130.57300.59580.028*
C110.5956 (3)0.61854 (13)0.48386 (11)0.0234 (4)
H11A0.54150.56220.45860.028*
C120.8779 (3)1.34470 (13)0.50102 (12)0.0287 (4)
H12A0.81191.37540.45180.043*
H12B1.01611.35350.51590.043*
H12C0.83531.37220.54000.043*
C130.8648 (2)0.52345 (12)0.27171 (9)0.0151 (3)
C140.8824 (2)0.42781 (12)0.25482 (9)0.0165 (3)
H14A0.99440.40670.24750.020*
C150.7332 (2)0.36386 (12)0.24892 (10)0.0174 (3)
H15A0.74340.30000.23720.021*
C160.5682 (2)0.39778 (12)0.26093 (9)0.0165 (3)
C170.5512 (2)0.49151 (12)0.28055 (10)0.0186 (3)
H17A0.44170.51200.29020.022*
C180.7013 (2)0.55480 (12)0.28563 (10)0.0181 (3)
H18A0.69200.61830.29840.022*
U11U22U33U12U13U23
S10.0255 (2)0.0248 (2)0.0196 (2)−0.00284 (17)0.00382 (17)0.00120 (17)
S20.01233 (18)0.01553 (19)0.01604 (19)0.00021 (14)0.00465 (14)0.00095 (14)
Cl10.01861 (19)0.0189 (2)0.0272 (2)−0.00466 (14)0.01069 (16)−0.00201 (16)
O10.0200 (6)0.0292 (7)0.0181 (6)−0.0020 (5)0.0090 (5)0.0007 (5)
O20.0144 (5)0.0239 (6)0.0174 (6)0.0000 (4)0.0022 (5)0.0013 (5)
O30.0181 (6)0.0143 (6)0.0314 (7)−0.0003 (4)0.0099 (5)0.0002 (5)
N10.0225 (7)0.0214 (7)0.0240 (8)−0.0001 (6)0.0127 (6)0.0011 (6)
C10.0289 (9)0.0304 (10)0.0204 (9)−0.0058 (8)0.0063 (7)−0.0019 (7)
C20.0298 (10)0.0285 (10)0.0192 (8)−0.0031 (8)0.0066 (7)0.0034 (7)
C30.0309 (9)0.0293 (10)0.0174 (8)−0.0016 (8)0.0085 (7)−0.0019 (7)
C40.0329 (10)0.0273 (10)0.0208 (9)0.0009 (8)0.0108 (8)0.0035 (7)
C50.0192 (8)0.0227 (9)0.0256 (9)−0.0001 (6)0.0114 (7)−0.0001 (7)
C60.0219 (8)0.0285 (9)0.0209 (8)−0.0034 (7)0.0073 (7)−0.0016 (7)
C70.0192 (8)0.0274 (9)0.0224 (9)0.0001 (7)0.0086 (7)−0.0019 (7)
C80.0181 (8)0.0239 (9)0.0227 (8)−0.0015 (6)0.0085 (7)−0.0015 (7)
C90.0176 (8)0.0251 (9)0.0133 (7)−0.0012 (6)0.0045 (6)0.0008 (6)
C100.0219 (8)0.0249 (9)0.0220 (9)−0.0019 (7)0.0061 (7)0.0044 (7)
C110.0225 (8)0.0211 (9)0.0242 (9)−0.0038 (7)0.0058 (7)0.0004 (7)
C120.0318 (10)0.0219 (9)0.0376 (11)−0.0020 (8)0.0186 (9)−0.0005 (8)
C130.0139 (7)0.0171 (8)0.0142 (7)−0.0002 (6)0.0048 (6)−0.0002 (6)
C140.0145 (7)0.0190 (8)0.0170 (8)0.0024 (6)0.0068 (6)−0.0008 (6)
C150.0186 (7)0.0148 (7)0.0192 (8)0.0016 (6)0.0075 (6)−0.0010 (6)
C160.0148 (7)0.0176 (8)0.0166 (7)−0.0027 (6)0.0051 (6)0.0008 (6)
C170.0148 (7)0.0180 (8)0.0249 (9)0.0018 (6)0.0094 (7)0.0001 (6)
C180.0182 (8)0.0148 (8)0.0217 (8)0.0011 (6)0.0078 (6)−0.0014 (6)
S1—C111.7105 (19)C7—C81.443 (3)
S1—C81.7335 (18)C7—H7A0.9300
S2—O11.4541 (12)C8—C91.366 (2)
S2—O31.4550 (12)C9—C101.443 (2)
S2—O21.4560 (12)C9—H9A0.9300
S2—C131.7806 (16)C10—C111.367 (3)
Cl1—C161.7428 (16)C10—H10A0.9300
N1—C21.346 (2)C11—H11A0.9300
N1—C31.352 (2)C12—H12A0.9600
N1—C121.479 (2)C12—H12B0.9600
C1—C21.363 (3)C12—H12C0.9600
C1—C51.395 (3)C13—C181.388 (2)
C1—H1A0.9300C13—C141.393 (2)
C2—H2A0.9300C14—C151.390 (2)
C3—C41.369 (3)C14—H14A0.9300
C3—H3A0.9300C15—C161.393 (2)
C4—C51.404 (3)C15—H15A0.9300
C4—H4A0.9300C16—C171.381 (2)
C5—C61.455 (3)C17—C181.393 (2)
C6—C71.334 (3)C17—H17A0.9300
C6—H6A0.9300C18—H18A0.9300
C11—S1—C891.87 (9)C8—C9—C10112.16 (15)
O1—S2—O3113.77 (7)C8—C9—H9A123.9
O1—S2—O2112.64 (7)C10—C9—H9A123.9
O3—S2—O2112.86 (7)C11—C10—C9112.22 (16)
O1—S2—C13105.32 (7)C11—C10—H10A123.9
O3—S2—C13105.65 (7)C9—C10—H10A123.9
O2—S2—C13105.68 (7)C10—C11—S1112.19 (14)
C2—N1—C3119.87 (16)C10—C11—H11A123.9
C2—N1—C12120.78 (16)S1—C11—H11A123.9
C3—N1—C12119.34 (16)N1—C12—H12A109.5
C2—C1—C5120.86 (18)N1—C12—H12B109.5
C2—C1—H1A119.6H12A—C12—H12B109.5
C5—C1—H1A119.6N1—C12—H12C109.5
N1—C2—C1121.28 (17)H12A—C12—H12C109.5
N1—C2—H2A119.4H12B—C12—H12C109.5
C1—C2—H2A119.4C18—C13—C14120.17 (15)
N1—C3—C4120.76 (17)C18—C13—S2120.39 (13)
N1—C3—H3A119.6C14—C13—S2119.44 (12)
C4—C3—H3A119.6C15—C14—C13120.28 (15)
C3—C4—C5120.70 (17)C15—C14—H14A119.9
C3—C4—H4A119.6C13—C14—H14A119.9
C5—C4—H4A119.6C14—C15—C16118.36 (15)
C1—C5—C4116.51 (17)C14—C15—H15A120.8
C1—C5—C6119.63 (17)C16—C15—H15A120.8
C4—C5—C6123.86 (17)C17—C16—C15122.20 (15)
C7—C6—C5124.26 (17)C17—C16—Cl1118.91 (12)
C7—C6—H6A117.9C15—C16—Cl1118.89 (13)
C5—C6—H6A117.9C16—C17—C18118.65 (15)
C6—C7—C8126.54 (17)C16—C17—H17A120.7
C6—C7—H7A116.7C18—C17—H17A120.7
C8—C7—H7A116.7C13—C18—C17120.27 (15)
C9—C8—C7124.44 (16)C13—C18—H18A119.9
C9—C8—S1111.55 (13)C17—C18—H18A119.9
C7—C8—S1124.01 (14)
C3—N1—C2—C11.0 (3)C8—C9—C10—C11−0.1 (2)
C12—N1—C2—C1179.98 (18)C9—C10—C11—S1−0.2 (2)
C5—C1—C2—N1−0.3 (3)C8—S1—C11—C100.36 (15)
C2—N1—C3—C4−0.4 (3)O1—S2—C13—C18−130.91 (14)
C12—N1—C3—C4−179.30 (17)O3—S2—C13—C18−10.19 (16)
N1—C3—C4—C5−1.1 (3)O2—S2—C13—C18109.65 (14)
C2—C1—C5—C4−1.0 (3)O1—S2—C13—C1448.59 (15)
C2—C1—C5—C6179.41 (18)O3—S2—C13—C14169.30 (13)
C3—C4—C5—C11.7 (3)O2—S2—C13—C14−70.85 (14)
C3—C4—C5—C6−178.76 (17)C18—C13—C14—C152.4 (2)
C1—C5—C6—C7175.16 (18)S2—C13—C14—C15−177.09 (12)
C4—C5—C6—C7−4.4 (3)C13—C14—C15—C16−0.5 (2)
C5—C6—C7—C8−179.72 (17)C14—C15—C16—C17−1.9 (3)
C6—C7—C8—C9179.23 (18)C14—C15—C16—Cl1177.84 (12)
C6—C7—C8—S1−1.5 (3)C15—C16—C17—C182.4 (3)
C11—S1—C8—C9−0.44 (14)Cl1—C16—C17—C18−177.33 (13)
C11—S1—C8—C7−179.82 (15)C14—C13—C18—C17−1.9 (2)
C7—C8—C9—C10179.78 (16)S2—C13—C18—C17177.59 (13)
S1—C8—C9—C100.40 (19)C16—C17—C18—C13−0.5 (2)
D—H···AD—HH···AD···AD—H···A
C3—H3A···O3i0.932.313.211 (2)164
C6—H6A···S10.932.843.228 (2)106
C7—H7A···O1ii0.932.393.266 (2)157
C9—H9A···O3ii0.932.593.495 (2)166
C10—H10A···O2iii0.932.393.302 (2)167
C11—H11A···O2iv0.932.553.063 (2)115
C12—H12C···O2i0.962.393.334 (2)168
C17—H17A···O2iv0.932.413.318 (2)166
C18—H18A···O30.932.512.892 (2)105
C12—H12B···Cg1i0.962.693.515 (2)144
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 is the centroid of the S1/C8–C11 thiophene ring.

D—H⋯AD—HH⋯ADAD—H⋯A
C3—H3A⋯O3i0.932.313.211 (2)164
C6—H6A⋯S10.932.843.228 (2)106
C7—H7A⋯O1ii0.932.393.266 (2)157
C9—H9A⋯O3ii0.932.583.495 (2)166
C10—H10A⋯O2iii0.932.393.302 (2)167
C11—H11A⋯O2iv0.932.553.063 (2)115
C12—H12C⋯O2i0.962.393.334 (2)168
C17—H17A⋯O2iv0.932.413.318 (2)166
C18—H18A⋯O30.932.512.892 (2)105
C12—H12BCg1i0.962.693.515 (2)144

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

  2 in total

1.  The Cambridge Structural Database: a quarter of a million crystal structures and rising.

Authors:  Frank H Allen
Journal:  Acta Crystallogr B       Date:  2002-05-29

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  2 in total
  7 in total

1.  (E)-1-Methyl-4-[2-(2-naphth-yl)vin-yl]pyridinium iodide.

Authors:  Hoong-Kun Fun; Kullapa Chanawanno; Suchada Chantrapromma
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-05-29

2.  2-[(E)-2-(1H-Indol-3-yl)ethen-yl]-1-methyl-pyridinium 4-chloro-benzene-sulfonate.

Authors:  Thawanrat Kobkeatthawin; Suchada Chantrapromma; Hoong-Kun Fun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-07-31

3.  (E)-1-Methyl-4-[2-(1-naphth-yl)vin-yl]pyridinium 4-bromo-benzene-sulfonate.

Authors:  Suchada Chantrapromma; Kullapa Chanawanno; Hoong-Kun Fun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-04-30

4.  1-Methyl-4-[(E)-2-(2-thien-yl)-ethen-yl]-pyridinium 4-methyl-benzene-sulfonate.

Authors:  Suchada Chantrapromma; Pumsak Ruanwas; Hoong-Kun Fun; Chatchanok Karalai
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-10-04

5.  1-Methyl-2-[(E)-2-(2-thien-yl)ethen-yl]quinolinium iodide.

Authors:  Pumsak Ruanwas; Thawanrat Kobkeatthawin; Suchada Chantrapromma; Hoong-Kun Fun; Chatchanok Karalai
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-07-09

6.  2-[(E)-2-(4-Chloro-phen-yl)ethen-yl]-1-methyl-pyridinium 4-chloro-benzene-sulfonate.

Authors:  Hoong-Kun Fun; Kullapa Chanawanno; Suchada Chantrapromma
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-06-13

7.  2-[(E)-2-(1H-Indol-3-yl)ethen-yl]-1-methyl-pyridinium 4-bromo-benzene-sulfonate.

Authors:  Suchada Chantrapromma; Thawanrat Kobkeatthawin; Hoong-Kun Fun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-04-02
  7 in total

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