| Literature DB >> 21583994 |
Suchada Chantrapromma, Thawanrat Kobkeatthawin, Hoong-Kun Fun.
Abstract
In the title compound, C(16)H(15)N(2) (+)·C(6)H(4)BrO(3)S(-), the cation exists in the E configuration and is essentially planar with a dihedral angle of 3.10 (5)° between the pyridinium ring and the indole ring system. The π-conjugated planes of the cation and the anion are inclined to each other at a dihedral angle of 64.32 (4)°. In the crystal structure, the cations are stacked in an anti-parallel manner along the a axis. The anions are linked into a chain along the a axis. The cations and the anions are linked into a three-dimensional network by N-H⋯O and weak C-H⋯O hydrogen bonds. The crystal structure is further stabilized by C-H⋯π inter-actions. A π-π inter-action between the five-membered heterocyclic ring of the indole system and the pyridinium ring is also observed with a centroid-centroid distance of 3.5855 (7) Å.Entities:
Year: 2009 PMID: 21583994 PMCID: PMC2977651 DOI: 10.1107/S1600536809011386
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C16H15N2+·C6H4BrO3S− | |
| Monoclinic, | Melting point = 508–510 K |
| Hall symbol: -P 2ybc | Mo |
| Cell parameters from 10581 reflections | |
| θ = 2.0–37.5° | |
| µ = 2.17 mm−1 | |
| β = 98.850 (1)° | |
| Block, yellow | |
| 0.31 × 0.27 × 0.16 mm |
| Bruker APEXII CCD area-detector diffractometer | 10581 independent reflections |
| Radiation source: sealed tube | 8073 reflections with |
| graphite | |
| φ and ω scans | θmax = 37.5°, θmin = 2.0° |
| Absorption correction: multi-scan ( | |
| 67716 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 10581 reflections | (Δ/σ)max = 0.003 |
| 267 parameters | Δρmax = 1.02 e Å−3 |
| 0 restraints | Δρmin = −0.66 e Å−3 |
| Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra
open-flow nitrogen cryostat
[Cosier, J. & Glazer, A. M. (1986).
|
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| Br1 | 0.437510 (18) | 0.545613 (9) | 0.317640 (6) | 0.02094 (4) | |
| S1 | 1.03248 (4) | 0.87587 (2) | 0.276111 (13) | 0.01297 (5) | |
| O1 | 1.08595 (14) | 0.92518 (8) | 0.33975 (5) | 0.02417 (19) | |
| O2 | 1.17976 (12) | 0.82343 (7) | 0.25255 (5) | 0.02343 (19) | |
| O3 | 0.93322 (13) | 0.94158 (8) | 0.22583 (5) | 0.0253 (2) | |
| C17 | 0.87426 (15) | 0.78270 (8) | 0.29047 (5) | 0.01413 (18) | |
| C18 | 0.92454 (16) | 0.68277 (9) | 0.30078 (6) | 0.01618 (19) | |
| H18A | 1.0438 | 0.6639 | 0.3012 | 0.019* | |
| C19 | 0.79634 (16) | 0.61112 (9) | 0.31052 (6) | 0.0171 (2) | |
| H19A | 0.8285 | 0.5442 | 0.3170 | 0.021* | |
| C20 | 0.61934 (16) | 0.64165 (8) | 0.31029 (6) | 0.01558 (19) | |
| C21 | 0.56765 (15) | 0.74130 (9) | 0.30144 (6) | 0.01596 (19) | |
| H21A | 0.4491 | 0.7603 | 0.3023 | 0.019* | |
| C22 | 0.69622 (15) | 0.81182 (8) | 0.29127 (6) | 0.01531 (18) | |
| H22A | 0.6637 | 0.8787 | 0.2850 | 0.018* | |
| N1 | 0.75652 (13) | 0.79242 (8) | 0.58104 (5) | 0.01574 (17) | |
| N2 | 0.77966 (15) | 1.20325 (8) | 0.35483 (5) | 0.01918 (19) | |
| C1 | 0.77944 (17) | 0.69502 (9) | 0.59983 (6) | 0.0196 (2) | |
| H1A | 0.7581 | 0.6761 | 0.6421 | 0.024* | |
| C2 | 0.83291 (18) | 0.62419 (9) | 0.55835 (7) | 0.0218 (2) | |
| H2A | 0.8490 | 0.5580 | 0.5721 | 0.026* | |
| C3 | 0.86283 (18) | 0.65363 (9) | 0.49483 (6) | 0.0210 (2) | |
| H3A | 0.8972 | 0.6067 | 0.4653 | 0.025* | |
| C4 | 0.84120 (17) | 0.75234 (9) | 0.47621 (6) | 0.0191 (2) | |
| H4A | 0.8621 | 0.7717 | 0.4340 | 0.023* | |
| C5 | 0.78805 (15) | 0.82472 (9) | 0.51967 (5) | 0.01522 (18) | |
| C6 | 0.76564 (17) | 0.92976 (9) | 0.50349 (6) | 0.01701 (19) | |
| H6A | 0.7261 | 0.9722 | 0.5346 | 0.020* | |
| C7 | 0.79955 (16) | 0.96932 (9) | 0.44504 (6) | 0.01598 (19) | |
| H7A | 0.8379 | 0.9250 | 0.4148 | 0.019* | |
| C8 | 0.78260 (15) | 1.07202 (9) | 0.42496 (5) | 0.01529 (18) | |
| C9 | 0.80825 (16) | 1.10341 (9) | 0.36157 (6) | 0.0178 (2) | |
| H9A | 0.8404 | 1.0618 | 0.3286 | 0.021* | |
| C10 | 0.73615 (16) | 1.24110 (9) | 0.41377 (6) | 0.0181 (2) | |
| C11 | 0.69668 (18) | 1.33969 (10) | 0.42910 (7) | 0.0234 (2) | |
| H11A | 0.6958 | 1.3909 | 0.3980 | 0.028* | |
| C12 | 0.65886 (19) | 1.35765 (10) | 0.49284 (8) | 0.0270 (3) | |
| H12A | 0.6305 | 1.4223 | 0.5047 | 0.032* | |
| C13 | 0.66243 (19) | 1.28055 (11) | 0.53972 (7) | 0.0263 (3) | |
| H13A | 0.6384 | 1.2953 | 0.5823 | 0.032* | |
| C14 | 0.70096 (18) | 1.18259 (10) | 0.52424 (6) | 0.0210 (2) | |
| H14A | 0.7027 | 1.1321 | 0.5559 | 0.025* | |
| C15 | 0.73730 (16) | 1.16115 (9) | 0.45962 (6) | 0.01610 (19) | |
| C16 | 0.69856 (17) | 0.86295 (10) | 0.62973 (6) | 0.0191 (2) | |
| H16A | 0.6809 | 0.8272 | 0.6693 | 0.029* | |
| H16B | 0.5877 | 0.8943 | 0.6105 | 0.029* | |
| H16C | 0.7894 | 0.9132 | 0.6410 | 0.029* | |
| H1N2 | 0.796 (2) | 1.2377 (15) | 0.3209 (10) | 0.028 (5)* |
| Br1 | 0.02422 (6) | 0.01477 (5) | 0.02501 (6) | −0.00464 (4) | 0.00755 (4) | −0.00167 (4) |
| S1 | 0.01221 (11) | 0.01335 (10) | 0.01371 (10) | −0.00058 (8) | 0.00315 (8) | −0.00260 (9) |
| O1 | 0.0282 (5) | 0.0241 (4) | 0.0212 (4) | −0.0076 (4) | 0.0070 (3) | −0.0102 (4) |
| O2 | 0.0167 (4) | 0.0236 (4) | 0.0319 (5) | 0.0008 (3) | 0.0096 (3) | −0.0090 (4) |
| O3 | 0.0191 (4) | 0.0244 (5) | 0.0314 (5) | −0.0025 (3) | 0.0008 (3) | 0.0130 (4) |
| C17 | 0.0150 (5) | 0.0134 (4) | 0.0139 (4) | 0.0011 (3) | 0.0021 (3) | −0.0009 (3) |
| C18 | 0.0155 (5) | 0.0147 (4) | 0.0185 (4) | 0.0037 (4) | 0.0031 (3) | 0.0000 (4) |
| C19 | 0.0210 (5) | 0.0130 (4) | 0.0177 (4) | 0.0029 (4) | 0.0044 (4) | 0.0003 (4) |
| C20 | 0.0187 (5) | 0.0128 (4) | 0.0156 (4) | −0.0010 (4) | 0.0035 (3) | −0.0006 (4) |
| C21 | 0.0150 (5) | 0.0147 (4) | 0.0183 (4) | 0.0008 (4) | 0.0030 (3) | 0.0006 (4) |
| C22 | 0.0161 (5) | 0.0118 (4) | 0.0181 (4) | 0.0018 (3) | 0.0032 (3) | 0.0004 (4) |
| N1 | 0.0177 (4) | 0.0157 (4) | 0.0134 (4) | −0.0026 (3) | 0.0012 (3) | 0.0000 (3) |
| N2 | 0.0209 (5) | 0.0179 (4) | 0.0184 (4) | −0.0003 (4) | 0.0023 (3) | 0.0052 (4) |
| C1 | 0.0216 (5) | 0.0172 (5) | 0.0191 (5) | −0.0032 (4) | 0.0004 (4) | 0.0039 (4) |
| C2 | 0.0241 (6) | 0.0150 (5) | 0.0253 (5) | −0.0007 (4) | 0.0004 (4) | 0.0023 (4) |
| C3 | 0.0229 (6) | 0.0165 (5) | 0.0230 (5) | 0.0023 (4) | 0.0020 (4) | −0.0021 (4) |
| C4 | 0.0234 (6) | 0.0175 (5) | 0.0164 (4) | 0.0021 (4) | 0.0032 (4) | −0.0001 (4) |
| C5 | 0.0159 (5) | 0.0156 (4) | 0.0138 (4) | −0.0009 (4) | 0.0011 (3) | 0.0007 (4) |
| C6 | 0.0207 (5) | 0.0151 (4) | 0.0157 (4) | 0.0013 (4) | 0.0044 (4) | 0.0006 (4) |
| C7 | 0.0180 (5) | 0.0153 (4) | 0.0145 (4) | 0.0004 (4) | 0.0020 (3) | 0.0002 (4) |
| C8 | 0.0157 (5) | 0.0152 (4) | 0.0148 (4) | 0.0000 (4) | 0.0017 (3) | 0.0008 (4) |
| C9 | 0.0180 (5) | 0.0186 (5) | 0.0166 (4) | 0.0000 (4) | 0.0025 (4) | 0.0017 (4) |
| C10 | 0.0161 (5) | 0.0164 (5) | 0.0210 (5) | −0.0002 (4) | 0.0006 (4) | 0.0012 (4) |
| C11 | 0.0200 (6) | 0.0151 (5) | 0.0338 (6) | 0.0013 (4) | 0.0004 (5) | 0.0019 (5) |
| C12 | 0.0230 (6) | 0.0178 (5) | 0.0402 (7) | 0.0017 (5) | 0.0045 (5) | −0.0072 (5) |
| C13 | 0.0269 (7) | 0.0238 (6) | 0.0290 (6) | 0.0002 (5) | 0.0073 (5) | −0.0085 (5) |
| C14 | 0.0241 (6) | 0.0197 (5) | 0.0197 (5) | −0.0005 (4) | 0.0054 (4) | −0.0030 (4) |
| C15 | 0.0154 (5) | 0.0152 (4) | 0.0173 (4) | −0.0001 (4) | 0.0016 (3) | 0.0002 (4) |
| C16 | 0.0233 (6) | 0.0200 (5) | 0.0143 (4) | −0.0028 (4) | 0.0043 (4) | −0.0022 (4) |
| Br1—C20 | 1.8978 (12) | C3—C4 | 1.3750 (18) |
| S1—O1 | 1.4492 (9) | C3—H3A | 0.9300 |
| S1—O2 | 1.4519 (9) | C4—C5 | 1.4070 (16) |
| S1—O3 | 1.4604 (10) | C4—H4A | 0.9300 |
| S1—C17 | 1.7768 (12) | C5—C6 | 1.4458 (16) |
| C17—C18 | 1.3952 (16) | C6—C7 | 1.3568 (16) |
| C17—C22 | 1.3966 (16) | C6—H6A | 0.9300 |
| C18—C19 | 1.3942 (17) | C7—C8 | 1.4318 (16) |
| C18—H18A | 0.9300 | C7—H7A | 0.9300 |
| C19—C20 | 1.3913 (17) | C8—C9 | 1.3929 (16) |
| C19—H19A | 0.9300 | C8—C15 | 1.4498 (16) |
| C20—C21 | 1.3913 (16) | C9—H9A | 0.9300 |
| C21—C22 | 1.3881 (16) | C10—C11 | 1.3961 (18) |
| C21—H21A | 0.9300 | C10—C15 | 1.4153 (16) |
| C22—H22A | 0.9300 | C11—C12 | 1.386 (2) |
| N1—C1 | 1.3599 (16) | C11—H11A | 0.9300 |
| N1—C5 | 1.3712 (15) | C12—C13 | 1.399 (2) |
| N1—C16 | 1.4782 (16) | C12—H12A | 0.9300 |
| N2—C9 | 1.3552 (16) | C13—C14 | 1.3874 (19) |
| N2—C10 | 1.3821 (16) | C13—H13A | 0.9300 |
| N2—H1N2 | 0.850 (19) | C14—C15 | 1.4079 (17) |
| C1—C2 | 1.3669 (19) | C14—H14A | 0.9300 |
| C1—H1A | 0.9300 | C16—H16A | 0.9600 |
| C2—C3 | 1.3971 (19) | C16—H16B | 0.9600 |
| C2—H2A | 0.9300 | C16—H16C | 0.9600 |
| O1—S1—O2 | 113.02 (6) | C5—C4—H4A | 119.3 |
| O1—S1—O3 | 112.93 (6) | N1—C5—C4 | 117.17 (10) |
| O2—S1—O3 | 113.24 (6) | N1—C5—C6 | 118.76 (10) |
| O1—S1—C17 | 105.91 (6) | C4—C5—C6 | 124.07 (10) |
| O2—S1—C17 | 106.22 (6) | C7—C6—C5 | 123.06 (11) |
| O3—S1—C17 | 104.63 (5) | C7—C6—H6A | 118.5 |
| C18—C17—C22 | 120.21 (11) | C5—C6—H6A | 118.5 |
| C18—C17—S1 | 121.51 (9) | C6—C7—C8 | 126.96 (11) |
| C22—C17—S1 | 118.27 (8) | C6—C7—H7A | 116.5 |
| C19—C18—C17 | 120.10 (11) | C8—C7—H7A | 116.5 |
| C19—C18—H18A | 120.0 | C9—C8—C7 | 122.14 (11) |
| C17—C18—H18A | 119.9 | C9—C8—C15 | 105.99 (10) |
| C20—C19—C18 | 118.68 (10) | C7—C8—C15 | 131.86 (10) |
| C20—C19—H19A | 120.7 | N2—C9—C8 | 110.32 (11) |
| C18—C19—H19A | 120.7 | N2—C9—H9A | 124.8 |
| C21—C20—C19 | 121.96 (11) | C8—C9—H9A | 124.8 |
| C21—C20—Br1 | 117.86 (9) | N2—C10—C11 | 128.65 (12) |
| C19—C20—Br1 | 120.10 (9) | N2—C10—C15 | 108.22 (10) |
| C22—C21—C20 | 118.82 (11) | C11—C10—C15 | 123.14 (12) |
| C22—C21—H21A | 120.6 | C12—C11—C10 | 116.88 (12) |
| C20—C21—H21A | 120.6 | C12—C11—H11A | 121.6 |
| C21—C22—C17 | 120.21 (10) | C10—C11—H11A | 121.6 |
| C21—C22—H22A | 119.9 | C11—C12—C13 | 121.35 (12) |
| C17—C22—H22A | 119.9 | C11—C12—H12A | 119.3 |
| C1—N1—C5 | 121.55 (10) | C13—C12—H12A | 119.3 |
| C1—N1—C16 | 117.47 (10) | C14—C13—C12 | 121.62 (13) |
| C5—N1—C16 | 120.98 (10) | C14—C13—H13A | 119.2 |
| C9—N2—C10 | 109.17 (10) | C12—C13—H13A | 119.2 |
| C9—N2—H1N2 | 125.1 (13) | C13—C14—C15 | 118.67 (12) |
| C10—N2—H1N2 | 125.5 (13) | C13—C14—H14A | 120.7 |
| N1—C1—C2 | 121.83 (11) | C15—C14—H14A | 120.7 |
| N1—C1—H1A | 119.1 | C14—C15—C10 | 118.33 (11) |
| C2—C1—H1A | 119.1 | C14—C15—C8 | 135.36 (11) |
| C1—C2—C3 | 118.42 (12) | C10—C15—C8 | 106.29 (10) |
| C1—C2—H2A | 120.8 | N1—C16—H16A | 109.5 |
| C3—C2—H2A | 120.8 | N1—C16—H16B | 109.5 |
| C4—C3—C2 | 119.61 (12) | H16A—C16—H16B | 109.5 |
| C4—C3—H3A | 120.2 | N1—C16—H16C | 109.5 |
| C2—C3—H3A | 120.2 | H16A—C16—H16C | 109.5 |
| C3—C4—C5 | 121.40 (11) | H16B—C16—H16C | 109.5 |
| C3—C4—H4A | 119.3 | ||
| O1—S1—C17—C18 | −98.92 (10) | C3—C4—C5—C6 | 179.02 (12) |
| O2—S1—C17—C18 | 21.50 (11) | N1—C5—C6—C7 | 177.69 (11) |
| O3—S1—C17—C18 | 141.54 (10) | C4—C5—C6—C7 | −2.13 (19) |
| O1—S1—C17—C22 | 81.05 (10) | C5—C6—C7—C8 | −179.49 (11) |
| O2—S1—C17—C22 | −158.53 (9) | C6—C7—C8—C9 | −175.13 (12) |
| O3—S1—C17—C22 | −38.49 (10) | C6—C7—C8—C15 | 3.9 (2) |
| C22—C17—C18—C19 | 1.37 (17) | C10—N2—C9—C8 | 0.64 (14) |
| S1—C17—C18—C19 | −178.65 (9) | C7—C8—C9—N2 | 178.35 (11) |
| C17—C18—C19—C20 | −0.57 (17) | C15—C8—C9—N2 | −0.92 (14) |
| C18—C19—C20—C21 | −0.76 (17) | C9—N2—C10—C11 | 179.84 (13) |
| C18—C19—C20—Br1 | 175.97 (9) | C9—N2—C10—C15 | −0.08 (14) |
| C19—C20—C21—C22 | 1.26 (17) | N2—C10—C11—C12 | −179.37 (13) |
| Br1—C20—C21—C22 | −175.54 (8) | C15—C10—C11—C12 | 0.53 (19) |
| C20—C21—C22—C17 | −0.44 (17) | C10—C11—C12—C13 | 0.8 (2) |
| C18—C17—C22—C21 | −0.86 (17) | C11—C12—C13—C14 | −1.1 (2) |
| S1—C17—C22—C21 | 179.16 (9) | C12—C13—C14—C15 | 0.1 (2) |
| C5—N1—C1—C2 | −0.78 (18) | C13—C14—C15—C10 | 1.18 (18) |
| C16—N1—C1—C2 | −179.93 (11) | C13—C14—C15—C8 | 179.66 (13) |
| N1—C1—C2—C3 | −0.56 (19) | N2—C10—C15—C14 | 178.40 (11) |
| C1—C2—C3—C4 | 1.17 (19) | C11—C10—C15—C14 | −1.52 (18) |
| C2—C3—C4—C5 | −0.48 (19) | N2—C10—C15—C8 | −0.48 (13) |
| C1—N1—C5—C4 | 1.44 (16) | C11—C10—C15—C8 | 179.60 (12) |
| C16—N1—C5—C4 | −179.43 (11) | C9—C8—C15—C14 | −177.76 (14) |
| C1—N1—C5—C6 | −178.40 (11) | C7—C8—C15—C14 | 3.1 (2) |
| C16—N1—C5—C6 | 0.73 (16) | C9—C8—C15—C10 | 0.84 (13) |
| C3—C4—C5—N1 | −0.81 (18) | C7—C8—C15—C10 | −178.33 (12) |
| H··· | ||||
| N2—H1N2···O2i | 0.85 (2) | 1.91 (2) | 2.7593 (14) | 175.2 (17) |
| C1—H1A···O3ii | 0.93 | 2.53 | 3.2067 (16) | 130 |
| C7—H7A···O1 | 0.93 | 2.58 | 3.3095 (16) | 136 |
| C9—H9A···O1 | 0.93 | 2.58 | 3.2426 (16) | 128 |
| C14—H14A···O1iii | 0.93 | 2.56 | 3.2987 (16) | 137 |
| C16—H16C···O1iii | 0.96 | 2.36 | 3.2739 (17) | 158 |
| C19—H19A···O3iv | 0.93 | 2.51 | 3.2052 (16) | 131 |
| C21—H21A···O2v | 0.93 | 2.28 | 3.1310 (15) | 152 |
| C4—H4A···Cg3 | 0.93 | 2.82 | 3.5579 (13) | 137 |
| C16—H16A···Cg3vi | 0.96 | 2.69 | 3.5731 (13) | 154 |
| C16—H16B···Cg1vii | 0.96 | 2.74 | 3.4836 (14) | 135 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H1 | 0.85 (2) | 1.91 (2) | 2.7593 (14) | 175.2 (17) |
| C1—H1 | 0.93 | 2.53 | 3.2067 (16) | 130 |
| C7—H7 | 0.93 | 2.58 | 3.3095 (16) | 136 |
| C9—H9 | 0.93 | 2.58 | 3.2426 (16) | 128 |
| C14—H14 | 0.93 | 2.56 | 3.2987 (16) | 137 |
| C16—H16 | 0.96 | 2.36 | 3.2739 (17) | 158 |
| C19—H19 | 0.93 | 2.51 | 3.2052 (16) | 131 |
| C21—H21 | 0.93 | 2.28 | 3.1310 (15) | 152 |
| C4—H4 | 0.93 | 2.82 | 3.5579 (13) | 137 |
| C16—H16 | 0.96 | 2.69 | 3.5731 (13) | 154 |
| C16—H16 | 0.96 | 2.74 | 3.4836 (14) | 135 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) . Cg1 and Cg3 are the centroids of the N2/C8–C10/C15 and C10–C15 rings, respectively.