Literature DB >> 21201864

Diaqua-bis(5-carb-oxy-2-methyl-1H-imidazole-4-carboxyl-ato-κN,O)manganese(II).

Jian-Zhong Zeng, Xiu-Guang Yi, Jun-Yue Lin, Shao-Ming Ying, Gan-Sheng Huang.   

Abstract

The title complex, [Mn(C(6)H(5)N(2)O(4))(2)(H(2)O)(2)], was obtained by hydro-thermal synthesis. The Mn(II) atom, which lies on an inversion centre, displays a slightly distorted octa-hedral geometry. In the crystal packing, complex mol-ecules are linked by inter-molecular O-H⋯O and N-H⋯O hydrogen bonds to form a three-dimensional supramolecular structure. The title complex is isostructural with the corresponding cadmium(II) complex [Nie, Wen, Wu, Liu & Liu (2007 ▶). Acta Cryst. E63, m753-m755].

Entities:  

Year:  2008        PMID: 21201864      PMCID: PMC2960861          DOI: 10.1107/S160053680800411X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Liang et al. (2002 ▶); Net et al. (1989 ▶); Nie et al. (2007 ▶); Ying & Mao (2006 ▶).

Experimental

Crystal data

[Mn(C6H5N2O4)2(H2O)2] M = 429.21 Monoclinic, a = 12.2047 (12) Å b = 9.1607 (9) Å c = 7.3860 (7) Å β = 101.355 (2)° V = 809.62 (14) Å3 Z = 2 Mo Kα radiation μ = 0.88 mm−1 T = 293 (2) K 0.30 × 0.21 × 0.12 mm

Data collection

Bruker APEX area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2002 ▶) T min = 0.778, T max = 0.902 5936 measured reflections 1931 independent reflections 1387 reflections with I > 2σ(I) R int = 0.033

Refinement

R[F 2 > 2σ(F 2)] = 0.033 wR(F 2) = 0.096 S = 0.96 1931 reflections 132 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.35 e Å−3 Δρmin = −0.35 e Å−3 Data collection: SMART (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Version 5.1; Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S160053680800411X/rz2194sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053680800411X/rz2194Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Mn(C6H5N2O4)2(H2O)2]F000 = 438
Mr = 429.21Dx = 1.761 Mg m3
Monoclinic, P21/cMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 3147 reflections
a = 12.2047 (12) Åθ = 2.8–28.2º
b = 9.1607 (9) ŵ = 0.88 mm1
c = 7.3860 (7) ÅT = 293 (2) K
β = 101.355 (2)ºPlate, colourless
V = 809.62 (14) Å30.30 × 0.21 × 0.12 mm
Z = 2
Bruker APEX area-detector diffractometer1931 independent reflections
Radiation source: fine-focus sealed tube1387 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.033
T = 293(2) Kθmax = 28.3º
φ and ω scansθmin = 2.8º
Absorption correction: multi-scan(SADABS; Sheldrick, 2002)h = −16→16
Tmin = 0.778, Tmax = 0.902k = −12→12
5936 measured reflectionsl = −9→9
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.033H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.096  w = 1/[σ2(Fo2) + (0.0578P)2] where P = (Fo2 + 2Fc2)/3
S = 0.96(Δ/σ)max < 0.001
1931 reflectionsΔρmax = 0.35 e Å3
132 parametersΔρmin = −0.35 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Mn10.00000.50000.00000.02937 (16)
N10.18504 (13)0.50974 (16)0.1269 (2)0.0293 (4)
N20.35369 (14)0.52117 (17)0.2952 (3)0.0363 (4)
H2A0.41430.55770.35810.044*
O10.50357 (12)0.30235 (19)0.4426 (3)0.0559 (5)
O20.39335 (12)0.12886 (16)0.3029 (2)0.0484 (4)
H2B0.32980.12260.24150.073*
O30.19549 (11)0.11771 (14)0.1132 (2)0.0352 (4)
O40.06082 (11)0.27347 (14)−0.01036 (19)0.0330 (3)
O5−0.02904 (16)0.4590 (2)0.2723 (3)0.0459 (5)
C10.2586 (2)0.7599 (2)0.2185 (4)0.0549 (7)
H1A0.18750.79220.15030.082*
H1B0.31720.80050.16450.082*
H1C0.26750.79150.34440.082*
C20.26397 (16)0.5981 (2)0.2124 (3)0.0339 (5)
C30.41682 (17)0.2662 (2)0.3431 (3)0.0370 (5)
C40.33359 (15)0.3766 (2)0.2638 (3)0.0309 (5)
C50.22732 (15)0.3710 (2)0.1569 (3)0.0273 (4)
C60.15691 (15)0.2449 (2)0.0818 (3)0.0277 (4)
H5B−0.071 (2)0.499 (2)0.319 (4)0.041 (8)*
H5A0.001 (2)0.397 (3)0.336 (4)0.065 (9)*
U11U22U33U12U13U23
Mn10.0254 (2)0.0274 (2)0.0312 (3)0.00137 (17)−0.00438 (17)0.00092 (17)
N10.0265 (9)0.0253 (8)0.0328 (10)−0.0015 (6)−0.0023 (7)−0.0002 (7)
N20.0232 (8)0.0327 (10)0.0468 (12)−0.0040 (7)−0.0081 (7)−0.0053 (8)
O10.0338 (9)0.0507 (10)0.0697 (12)0.0059 (7)−0.0231 (8)−0.0116 (9)
O20.0350 (8)0.0358 (9)0.0650 (11)0.0064 (7)−0.0127 (7)−0.0026 (7)
O30.0305 (7)0.0248 (7)0.0466 (9)−0.0008 (6)−0.0011 (6)−0.0008 (6)
O40.0275 (7)0.0276 (7)0.0379 (9)−0.0018 (6)−0.0080 (6)−0.0034 (6)
O50.0493 (11)0.0499 (10)0.0391 (10)0.0240 (9)0.0099 (8)0.0137 (8)
C10.0500 (15)0.0375 (13)0.071 (2)0.0001 (11)−0.0042 (13)−0.0063 (12)
C20.0283 (10)0.0309 (10)0.0388 (13)−0.0037 (8)−0.0029 (9)−0.0022 (9)
C30.0276 (10)0.0376 (12)0.0415 (14)0.0043 (8)−0.0037 (9)−0.0016 (10)
C40.0244 (10)0.0317 (11)0.0335 (12)−0.0012 (8)−0.0022 (8)−0.0025 (8)
C50.0230 (9)0.0293 (10)0.0275 (11)−0.0010 (7)−0.0003 (7)−0.0006 (8)
C60.0255 (10)0.0276 (10)0.0286 (11)−0.0023 (8)0.0015 (8)−0.0010 (8)
Mn1—O5i2.1433 (19)O2—H2B0.8200
Mn1—O52.1433 (19)O3—C61.261 (2)
Mn1—O42.2103 (13)O4—C61.262 (2)
Mn1—O4i2.2103 (13)O5—H5B0.77 (3)
Mn1—N12.2700 (16)O5—H5A0.78 (3)
Mn1—N1i2.2700 (16)C1—C21.485 (3)
N1—C21.320 (2)C1—H1A0.9600
N1—C51.373 (2)C1—H1B0.9600
N2—C21.344 (3)C1—H1C0.9600
N2—C41.358 (2)C3—C41.471 (3)
N2—H2A0.8600C4—C51.380 (3)
O1—C31.210 (2)C5—C61.481 (3)
O2—C31.311 (2)
O5i—Mn1—O5180.00 (10)Mn1—O5—H5A124 (2)
O5i—Mn1—O490.77 (6)H5B—O5—H5A110 (3)
O5—Mn1—O489.23 (6)C2—C1—H1A109.5
O5i—Mn1—O4i89.23 (6)C2—C1—H1B109.5
O5—Mn1—O4i90.77 (6)H1A—C1—H1B109.5
O4—Mn1—O4i180.00 (10)C2—C1—H1C109.5
O5i—Mn1—N192.62 (7)H1A—C1—H1C109.5
O5—Mn1—N187.38 (7)H1B—C1—H1C109.5
O4—Mn1—N174.79 (5)N1—C2—N2110.42 (18)
O4i—Mn1—N1105.21 (5)N1—C2—C1126.44 (19)
O5i—Mn1—N1i87.38 (7)N2—C2—C1123.14 (18)
O5—Mn1—N1i92.62 (7)O1—C3—O2121.74 (19)
O4—Mn1—N1i105.21 (5)O1—C3—C4120.44 (19)
O4i—Mn1—N1i74.79 (5)O2—C3—C4117.82 (17)
N1—Mn1—N1i180.00 (8)N2—C4—C5104.59 (16)
C2—N1—C5105.93 (16)N2—C4—C3121.00 (17)
C2—N1—Mn1142.63 (14)C5—C4—C3134.39 (18)
C5—N1—Mn1110.00 (11)N1—C5—C4109.80 (15)
C2—N2—C4109.25 (16)N1—C5—C6119.32 (16)
C2—N2—H2A125.4C4—C5—C6130.84 (17)
C4—N2—H2A125.4O4—C6—O3124.39 (16)
C3—O2—H2B109.5O4—C6—C5116.68 (16)
C6—O4—Mn1117.32 (11)O3—C6—C5118.93 (16)
Mn1—O5—H5B126 (2)
D—H···AD—HH···AD···AD—H···A
O5—H5B···O3ii0.77 (3)2.01 (3)2.763 (2)168 (3)
O5—H5A···O4iii0.78 (3)1.98 (3)2.760 (2)174 (3)
N2—H2A···O1iv0.862.062.841 (2)151
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O5—H5B⋯O3i0.77 (3)2.01 (3)2.763 (2)168 (3)
O5—H5A⋯O4ii0.78 (3)1.98 (3)2.760 (2)174 (3)
N2—H2A⋯O1iii0.862.062.841 (2)151

Symmetry codes: (i) ; (ii) ; (iii) .

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