| Literature DB >> 21582702 |
Yi Liang Li1, Xin Guo, Ju Xian Wang, Yu Cheng Wang.
Abstract
The title compound, [Mg(C(6)H(5)N(2)O(4))(2)(H(2)O)(2)], was prepared by reaction of Mg(NO(3))(2) and 2-methyl-1H-imidazole-4,5-dicarboxylic acid under hydro-thermal conditions. The Mg(II) atom lies on an inversion centre and displays a distorted octa-hedral coordination geometry. An extended three-dimensional network of inter-molecular O-H⋯O and N-H⋯O hydrogen bonds stabilizes the crystal structure.Entities:
Year: 2009 PMID: 21582702 PMCID: PMC2969309 DOI: 10.1107/S160053680902176X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Mg(C6H5N2O4)2(H2O)2] | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 1023 reflections | |
| θ = 3.9–27.4° | |
| µ = 0.18 mm−1 | |
| α = 109.18 (3)° | |
| β = 95.142 (17)° | Block, colourless |
| γ = 93.14 (2)° | 0.30 × 0.25 × 0.20 mm |
| Rigaku SCXmini diffractometer | 1767 independent reflections |
| Radiation source: fine-focus sealed tube | 1308 reflections with |
| graphite | |
| Detector resolution: 13.6612 pixels mm-1 | θmax = 27.4°, θmin = 2.7° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 4002 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 1767 reflections | (Δ/σ)max < 0.001 |
| 125 parameters | Δρmax = 0.39 e Å−3 |
| 0 restraints | Δρmin = −0.42 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Mg1 | 0.5000 | 1.0000 | 1.0000 | 0.0250 (4) | |
| C1 | 0.3793 (6) | 0.7562 (4) | 0.6015 (3) | 0.0229 (7) | |
| C2 | 0.5912 (6) | 0.8628 (4) | 0.6010 (3) | 0.0223 (7) | |
| C3 | 0.5089 (7) | 0.6811 (4) | 0.3730 (4) | 0.0267 (7) | |
| C4 | 0.5167 (9) | 0.5941 (5) | 0.2137 (4) | 0.0385 (9) | |
| H4A | 0.4178 | 0.6492 | 0.1569 | 0.058* | |
| H4B | 0.4347 | 0.4851 | 0.1885 | 0.058* | |
| H4C | 0.7026 | 0.5915 | 0.1922 | 0.058* | |
| C5 | 0.1991 (7) | 0.7356 (4) | 0.7122 (3) | 0.0240 (7) | |
| C6 | 0.7466 (6) | 1.0094 (4) | 0.7140 (3) | 0.0233 (7) | |
| N1 | 0.3343 (6) | 0.6454 (3) | 0.4585 (3) | 0.0268 (6) | |
| H1 | 0.2007 | 0.5554 | 0.4365 | 0.040* | |
| N2 | 0.6676 (6) | 0.8120 (3) | 0.4581 (3) | 0.0258 (6) | |
| H2 | 0.7914 | 0.8719 | 0.4213 | 0.039* | |
| O1 | 0.6722 (5) | 1.0584 (3) | 0.8405 (2) | 0.0319 (6) | |
| O2 | 0.9380 (5) | 1.0749 (3) | 0.6734 (3) | 0.0380 (7) | |
| O3 | 0.2358 (5) | 0.8310 (3) | 0.8427 (2) | 0.0312 (6) | |
| O4 | 0.0166 (6) | 0.6225 (3) | 0.6638 (3) | 0.0410 (7) | |
| O5 | 0.2236 (5) | 1.1757 (3) | 1.0012 (3) | 0.0336 (6) | |
| H5B | 0.1354 | 1.1572 | 0.9070 | 0.050* | |
| H5A | 0.0940 | 1.1836 | 1.0574 | 0.050* |
| Mg1 | 0.0230 (8) | 0.0287 (8) | 0.0195 (8) | −0.0077 (6) | 0.0050 (6) | 0.0042 (6) |
| C1 | 0.0240 (15) | 0.0222 (15) | 0.0209 (15) | −0.0021 (12) | 0.0033 (12) | 0.0055 (12) |
| C2 | 0.0213 (14) | 0.0243 (15) | 0.0216 (15) | −0.0001 (12) | 0.0050 (12) | 0.0078 (12) |
| C3 | 0.0294 (17) | 0.0240 (16) | 0.0261 (16) | −0.0019 (13) | 0.0057 (13) | 0.0076 (13) |
| C4 | 0.054 (2) | 0.0332 (19) | 0.0227 (18) | −0.0042 (17) | 0.0105 (16) | 0.0014 (15) |
| C5 | 0.0232 (15) | 0.0254 (15) | 0.0224 (15) | −0.0035 (12) | 0.0057 (12) | 0.0067 (12) |
| C6 | 0.0230 (15) | 0.0259 (16) | 0.0206 (15) | −0.0033 (12) | 0.0031 (12) | 0.0081 (13) |
| N1 | 0.0277 (14) | 0.0253 (14) | 0.0248 (14) | −0.0064 (11) | 0.0068 (11) | 0.0052 (11) |
| N2 | 0.0284 (14) | 0.0268 (14) | 0.0228 (14) | −0.0031 (11) | 0.0060 (11) | 0.0092 (11) |
| O1 | 0.0353 (13) | 0.0336 (14) | 0.0227 (12) | −0.0103 (11) | 0.0076 (10) | 0.0049 (10) |
| O2 | 0.0346 (14) | 0.0432 (16) | 0.0330 (14) | −0.0165 (12) | 0.0112 (11) | 0.0098 (12) |
| O3 | 0.0319 (13) | 0.0347 (14) | 0.0208 (12) | −0.0114 (10) | 0.0069 (10) | 0.0022 (10) |
| O4 | 0.0408 (15) | 0.0392 (15) | 0.0323 (14) | −0.0239 (12) | 0.0092 (12) | 0.0008 (11) |
| O5 | 0.0280 (13) | 0.0385 (14) | 0.0326 (13) | −0.0015 (10) | 0.0091 (10) | 0.0090 (11) |
| Mg1—O1i | 2.010 (2) | C3—C4 | 1.475 (5) |
| Mg1—O1 | 2.010 (2) | C4—H4A | 0.9600 |
| Mg1—O3i | 2.036 (2) | C4—H4B | 0.9600 |
| Mg1—O3 | 2.036 (2) | C4—H4C | 0.9600 |
| Mg1—O5i | 2.110 (3) | C5—O4 | 1.238 (4) |
| Mg1—O5 | 2.110 (3) | C5—O3 | 1.249 (4) |
| C1—C2 | 1.365 (4) | C6—O2 | 1.237 (4) |
| C1—N1 | 1.388 (4) | C6—O1 | 1.247 (4) |
| C1—C5 | 1.496 (4) | N1—H1 | 0.9534 |
| C2—N2 | 1.393 (4) | N2—H2 | 0.9489 |
| C2—C6 | 1.498 (5) | O5—H5B | 0.9297 |
| C3—N2 | 1.330 (4) | O5—H5A | 0.8656 |
| C3—N1 | 1.336 (4) | ||
| O1i—Mg1—O1 | 180.000 (1) | C3—C4—H4A | 109.5 |
| O1i—Mg1—O3i | 89.92 (10) | C3—C4—H4B | 109.5 |
| O1—Mg1—O3i | 90.08 (10) | H4A—C4—H4B | 109.5 |
| O1i—Mg1—O3 | 90.08 (10) | C3—C4—H4C | 109.5 |
| O1—Mg1—O3 | 89.92 (10) | H4A—C4—H4C | 109.5 |
| O3i—Mg1—O3 | 180.000 (1) | H4B—C4—H4C | 109.5 |
| O1i—Mg1—O5i | 87.90 (11) | O4—C5—O3 | 124.6 (3) |
| O1—Mg1—O5i | 92.10 (11) | O4—C5—C1 | 115.5 (3) |
| O3i—Mg1—O5i | 88.95 (11) | O3—C5—C1 | 119.9 (3) |
| O3—Mg1—O5i | 91.05 (11) | O2—C6—O1 | 124.7 (3) |
| O1i—Mg1—O5 | 92.10 (11) | O2—C6—C2 | 117.0 (3) |
| O1—Mg1—O5 | 87.90 (11) | O1—C6—C2 | 118.3 (3) |
| O3i—Mg1—O5 | 91.05 (11) | C3—N1—C1 | 110.7 (3) |
| O3—Mg1—O5 | 88.95 (11) | C3—N1—H1 | 129.8 |
| O5i—Mg1—O5 | 180.000 (1) | C1—N1—H1 | 119.3 |
| C2—C1—N1 | 105.8 (3) | C3—N2—C2 | 110.1 (3) |
| C2—C1—C5 | 136.3 (3) | C3—N2—H2 | 123.8 |
| N1—C1—C5 | 117.9 (3) | C2—N2—H2 | 125.2 |
| C1—C2—N2 | 106.6 (3) | C6—O1—Mg1 | 147.0 (2) |
| C1—C2—C6 | 135.2 (3) | C5—O3—Mg1 | 145.7 (2) |
| N2—C2—C6 | 118.2 (3) | Mg1—O5—H5B | 111.2 |
| N2—C3—N1 | 106.8 (3) | Mg1—O5—H5A | 117.4 |
| N2—C3—C4 | 127.0 (3) | H5B—O5—H5A | 104.9 |
| N1—C3—C4 | 126.2 (3) | ||
| N1—C1—C2—N2 | −0.3 (4) | N1—C3—N2—C2 | −0.7 (4) |
| C5—C1—C2—N2 | −179.6 (4) | C4—C3—N2—C2 | 177.5 (4) |
| N1—C1—C2—C6 | −179.5 (3) | C1—C2—N2—C3 | 0.7 (4) |
| C5—C1—C2—C6 | 1.2 (7) | C6—C2—N2—C3 | −180.0 (3) |
| C2—C1—C5—O4 | 176.8 (4) | O2—C6—O1—Mg1 | −150.7 (3) |
| N1—C1—C5—O4 | −2.4 (5) | C2—C6—O1—Mg1 | 30.6 (6) |
| C2—C1—C5—O3 | −2.0 (6) | O3i—Mg1—O1—C6 | 142.4 (4) |
| N1—C1—C5—O3 | 178.8 (3) | O3—Mg1—O1—C6 | −37.6 (4) |
| C1—C2—C6—O2 | 177.8 (4) | O5i—Mg1—O1—C6 | 53.4 (4) |
| N2—C2—C6—O2 | −1.3 (5) | O5—Mg1—O1—C6 | −126.6 (4) |
| C1—C2—C6—O1 | −3.4 (6) | O4—C5—O3—Mg1 | 163.9 (3) |
| N2—C2—C6—O1 | 177.5 (3) | C1—C5—O3—Mg1 | −17.4 (6) |
| N2—C3—N1—C1 | 0.5 (4) | O1i—Mg1—O3—C5 | −151.8 (4) |
| C4—C3—N1—C1 | −177.8 (3) | O1—Mg1—O3—C5 | 28.2 (4) |
| C2—C1—N1—C3 | −0.1 (4) | O5i—Mg1—O3—C5 | −63.9 (4) |
| C5—C1—N1—C3 | 179.3 (3) | O5—Mg1—O3—C5 | 116.1 (4) |
| H··· | ||||
| N1—H1···O4ii | 0.95 | 1.78 | 2.696 (4) | 161 |
| N2—H2···O2iii | 0.95 | 1.81 | 2.727 (4) | 162 |
| O5—H5B···O2iv | 0.93 | 2.23 | 3.155 (4) | 172 |
| O5—H5B···O1iv | 0.93 | 2.36 | 2.961 (4) | 122 |
| O5—H5A···O3v | 0.87 | 1.98 | 2.841 (4) | 170 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1⋯O4i | 0.95 | 1.78 | 2.696 (4) | 161 |
| N2—H2⋯O2ii | 0.95 | 1.81 | 2.727 (4) | 162 |
| O5—H5 | 0.93 | 2.23 | 3.155 (4) | 172 |
| O5—H5 | 0.93 | 2.36 | 2.961 (4) | 122 |
| O5—H5 | 0.87 | 1.98 | 2.841 (4) | 170 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .