Literature DB >> 21201782

N,N'-Bis(3-methoxy-benzyl-idene)ethane-1,2-diamine.

Hoong-Kun Fun, Valiollah Mirkhani, Akbar Rostami Vartooni.   

Abstract

The mol-ecule of the title bidentate Schiff base ligand, C(18)H(20)N(2)O(2), has twofold crystallographic rotation symmetry, giving one half-mol-ecule per asymmetric unit. It adopts a twisted E configuration with respect to the azomethine C=N bond. The imino group is coplanar with the aromatic ring. The dihedral angle between the two benzene rings is 69.52 (5)°. The meth-oxy group is coplanar with the benzene ring, as indicated by the C-O-C-C torsion angle of -179.56 (8)°. In the unit cell, mol-ecules are linked together by inter-molecular C-H⋯O hydrogen bonds, forming chains along the a axis; these chains are further stacked down the b axis by both inter-molecular C-H⋯O and C-H⋯π inter-actions.

Entities:  

Year:  2008        PMID: 21201782      PMCID: PMC2960703          DOI: 10.1107/S1600536808026652

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures see: Fun et al. (2008a ▶,b ▶,c ▶,d ▶); Calligaris & Randaccio, (1987 ▶). For information on Schiff base complexes and their applications, see: Kia et al. (2007a ▶,b ▶); Pal et al. (2005 ▶); Hou et al. (2001 ▶)

Experimental

Crystal data

C18H20N2O2 M = 296.36 Monoclinic, a = 22.7076 (3) Å b = 6.0374 (1) Å c = 11.6789 (2) Å β = 100.235 (1)° V = 1575.64 (4) Å3 Z = 4 Mo Kα radiation μ = 0.08 mm−1 T = 100.0 (1) K 0.49 × 0.33 × 0.22 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (; Bruker, 2005 ▶) T min = 0.886, T max = 0.982 11683 measured reflections 2298 independent reflections 1879 reflections with I > 2σ(I) R int = 0.029

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.108 S = 1.10 2298 reflections 113 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.35 e Å−3 Δρmin = −0.21 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: APEX2; data reduction: SAINT (Bruker, 2005 ▶); program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2003 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808026652/fl2216sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808026652/fl2216Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H20N2O2F000 = 632
Mr = 296.36Dx = 1.249 Mg m3
Monoclinic, C2/cMo Kα radiation λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 3509 reflections
a = 22.7076 (3) Åθ = 3.6–33.9º
b = 6.03740 (10) ŵ = 0.08 mm1
c = 11.6789 (2) ÅT = 100.0 (1) K
β = 100.2350 (10)ºBlock, colourless
V = 1575.64 (4) Å30.49 × 0.33 × 0.22 mm
Z = 4
Bruker SMART APEXII CCD area-detector diffractometer2298 independent reflections
Radiation source: fine-focus sealed tube1879 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.029
T = 100.0(1) Kθmax = 30.0º
φ and ω scansθmin = 3.5º
Absorption correction: multi-scan(SADABS; Bruker, 2005)h = −31→31
Tmin = 0.886, Tmax = 0.982k = −8→8
11683 measured reflectionsl = −14→16
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.041H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.108  w = 1/[σ2(Fo2) + (0.0467P)2 + 0.7792P] where P = (Fo2 + 2Fc2)/3
S = 1.11(Δ/σ)max < 0.001
2298 reflectionsΔρmax = 0.35 e Å3
113 parametersΔρmin = −0.21 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Experimental. The low-temperature data was collected with the Oxford Cyrosystem Cobra low-temperature attachment.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.29856 (3)0.12810 (12)0.16829 (6)0.02029 (18)
N10.44163 (4)0.77578 (14)0.17093 (8)0.0197 (2)
C10.36408 (4)0.39310 (16)0.11788 (8)0.0166 (2)
H1A0.36290.46250.18850.020*
C20.33032 (4)0.20304 (16)0.08715 (8)0.0167 (2)
C30.33099 (4)0.10022 (17)−0.01966 (9)0.0196 (2)
H3A0.3080−0.0257−0.04070.024*
C40.36637 (4)0.18805 (18)−0.09415 (9)0.0216 (2)
H4A0.36710.1197−0.16530.026*
C50.40051 (4)0.37574 (18)−0.06388 (9)0.0203 (2)
H5A0.42400.4328−0.11450.024*
C60.39970 (4)0.47980 (17)0.04289 (8)0.0172 (2)
C70.43794 (4)0.67504 (17)0.07480 (9)0.0184 (2)
C80.48159 (5)0.96685 (17)0.18898 (10)0.0215 (2)
C90.26352 (5)−0.06749 (17)0.14119 (10)0.0225 (2)
H9A0.2443−0.10470.20550.034*
H9B0.2890−0.18740.12670.034*
H9C0.2337−0.04190.07310.034*
H7A0.4614 (6)0.722 (2)0.0143 (11)0.027 (3)*
H8B0.4562 (6)1.100 (2)0.1792 (11)0.025 (3)*
H8A0.5085 (6)0.971 (2)0.1293 (12)0.026 (3)*
U11U22U33U12U13U23
O10.0226 (4)0.0197 (4)0.0195 (4)−0.0036 (3)0.0063 (3)−0.0004 (3)
N10.0174 (4)0.0181 (4)0.0228 (4)−0.0004 (3)0.0018 (3)0.0020 (3)
C10.0170 (4)0.0178 (4)0.0144 (4)0.0026 (3)0.0015 (3)−0.0002 (3)
C20.0152 (4)0.0179 (4)0.0167 (5)0.0027 (3)0.0020 (3)0.0019 (3)
C30.0190 (5)0.0191 (5)0.0196 (5)0.0007 (4)0.0006 (4)−0.0027 (4)
C40.0202 (5)0.0281 (5)0.0157 (5)0.0031 (4)0.0014 (4)−0.0039 (4)
C50.0177 (5)0.0271 (5)0.0161 (5)0.0012 (4)0.0031 (4)0.0016 (4)
C60.0153 (4)0.0192 (5)0.0163 (4)0.0022 (3)0.0003 (3)0.0022 (4)
C70.0164 (4)0.0197 (5)0.0189 (5)0.0008 (4)0.0026 (4)0.0056 (4)
C80.0186 (5)0.0162 (5)0.0291 (6)−0.0010 (4)0.0027 (4)0.0027 (4)
C90.0226 (5)0.0189 (5)0.0255 (5)−0.0033 (4)0.0025 (4)0.0019 (4)
O1—C21.3659 (12)C4—H4A0.9300
O1—C91.4277 (12)C5—C61.3993 (14)
N1—C71.2665 (14)C5—H5A0.9300
N1—C81.4597 (13)C6—C71.4723 (14)
C1—C21.3912 (14)C7—H7A0.999 (13)
C1—C61.3954 (13)C8—C8i1.519 (2)
C1—H1A0.9300C8—H8B0.984 (13)
C2—C31.3958 (14)C8—H8A1.005 (13)
C3—C41.3899 (14)C9—H9A0.9600
C3—H3A0.9300C9—H9B0.9600
C4—C51.3830 (15)C9—H9C0.9600
C2—O1—C9117.53 (8)C1—C6—C7121.54 (9)
C7—N1—C8116.68 (9)C5—C6—C7118.98 (9)
C2—C1—C6120.12 (9)N1—C7—C6123.50 (9)
C2—C1—H1A119.9N1—C7—H7A122.1 (8)
C6—C1—H1A119.9C6—C7—H7A114.4 (8)
O1—C2—C1115.39 (8)N1—C8—C8i111.10 (7)
O1—C2—C3124.31 (9)N1—C8—H8B106.9 (8)
C1—C2—C3120.29 (9)C8i—C8—H8B108.8 (8)
C4—C3—C2119.28 (9)N1—C8—H8A111.0 (8)
C4—C3—H3A120.4C8i—C8—H8A110.5 (7)
C2—C3—H3A120.4H8B—C8—H8A108.3 (11)
C5—C4—C3120.84 (9)O1—C9—H9A109.5
C5—C4—H4A119.6O1—C9—H9B109.5
C3—C4—H4A119.6H9A—C9—H9B109.5
C4—C5—C6120.01 (9)O1—C9—H9C109.5
C4—C5—H5A120.0H9A—C9—H9C109.5
C6—C5—H5A120.0H9B—C9—H9C109.5
C1—C6—C5119.46 (9)
C9—O1—C2—C1−179.56 (8)C2—C1—C6—C50.84 (14)
C9—O1—C2—C3−0.45 (14)C2—C1—C6—C7−177.36 (8)
C6—C1—C2—O1177.98 (8)C4—C5—C6—C1−0.24 (15)
C6—C1—C2—C3−1.17 (14)C4—C5—C6—C7178.01 (9)
O1—C2—C3—C4−178.19 (9)C8—N1—C7—C6−179.92 (9)
C1—C2—C3—C40.88 (15)C1—C6—C7—N10.51 (15)
C2—C3—C4—C5−0.27 (15)C5—C6—C7—N1−177.70 (10)
C3—C4—C5—C6−0.04 (15)C7—N1—C8—C8i−136.92 (11)
D—H···AD—HH···AD···AD—H···A
C9—H9A···O1ii0.962.503.3809 (13)153
C8—H8B···Cg1iii0.984 (13)2.822 (13)3.6221 (12)138.9 (9)
C9—H9C···Cg1iv0.962.753.5636 (12)143
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C9—H9A⋯O1i0.962.503.3809 (13)153
C8—H8BCg1ii0.984 (13)2.822 (13)3.6221 (12)138.9 (9)
C9—H9CCg1iii0.962.753.5636 (12)143

Symmetry codes: (i) ; (ii) ; (iii) . Cg1 is the centroid of the C1–C6 benzene ring.

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