Literature DB >> 21201428

Ethane-1,2-diylbis(methyl-phosphinic acid).

Guido J Reiss1, Judith S Engel.   

Abstract

In the title compound, C(4)H(12)O(4)P(2), there are two crystallographically independent half-mol-ecules in the asymmetric unit, both molecules lying on centres of symmetry. Each mol-ecule is connected on both sides to neighbouring mol-ecules via strong O-H⋯O hydrogen bonds. The -POOH groups accept and donate one hydrogen bond in interactions with the neighbouring -POOH group of the adjacent mol-ecule, to give one-dimensional chains along [10]. As each phosphinic acid group donates and accepts one hydrogen bond, the connection between the mol-ecules is best described by a ring motif which can be classified by the Etter symbol R(2) (2)(8).

Entities:  

Year:  2008        PMID: 21201428      PMCID: PMC2960156          DOI: 10.1107/S1600536807068122

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Bruckmann et al. (1999 ▶); Etter et al. (1990 ▶); Sicken et al. (2000 ▶).

Experimental

Crystal data

C4H12O4P2 M = 186.08 Monoclinic, a = 6.7761 (18) Å b = 18.703 (8) Å c = 6.8401 (15) Å β = 102.09 (3)° V = 847.7 (5) Å3 Z = 4 Mo Kα radiation μ = 0.47 mm−1 T = 290 (2) K 0.40 × 0.35 × 0.30 mm

Data collection

Nicolet/Siemens P21/P3 four-circle diffractometer Absorption correction: none 4847 measured reflections 2466 independent reflections 1879 reflections with I > 2σ(I) R int = 0.023 3 standard reflections every 100 reflections intensity decay: none

Refinement

R[F 2 > 2σ(F 2)] = 0.035 wR(F 2) = 0.079 S = 1.01 2466 reflections 139 parameters All H-atom parameters refined Δρmax = 0.35 e Å−3 Δρmin = −0.34 e Å−3 Data collection: R3m/V Software (Siemens, 1989 ▶); cell refinement: R3m/V Software; data reduction: R3m/V Software; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997 ▶); molecular graphics: DIAMOND (Brandenburg, 2001 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536807068122/pk2077sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536807068122/pk2077Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C4H12O4P2F000 = 392
Mr = 186.08Dx = 1.458 Mg m3
Monoclinic, P21/cMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 37 reflections
a = 6.7761 (18) Åθ = 5.1–14.3º
b = 18.703 (8) ŵ = 0.47 mm1
c = 6.8401 (15) ÅT = 290 (2) K
β = 102.09 (3)ºBlock, colourless
V = 847.7 (5) Å30.40 × 0.35 × 0.30 mm
Z = 4
Nicolet/Siemens P21/P3-four-circle diffractometerRint = 0.023
Radiation source: fine-focus sealed tubeθmax = 30.0º
Monochromator: graphiteθmin = 2.2º
T = 290(2) Kh = 0→9
ω scansk = −26→26
Absorption correction: nonel = −9→9
4847 measured reflections3 standard reflections
2466 independent reflections every 100 reflections
1879 reflections with I > 2σ(I) intensity decay: none
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.035All H-atom parameters refined
wR(F2) = 0.079  w = 1/[σ2(Fo2) + (0.025P)2 + 0.41P] where P = (Fo2 + 2Fc2)/3
S = 1.01(Δ/σ)max = 0.003
2466 reflectionsΔρmax = 0.35 e Å3
139 parametersΔρmin = −0.34 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
P10.10537 (7)0.60187 (2)0.89929 (7)0.03542 (12)
O10.0298 (2)0.59213 (9)0.6716 (2)0.0477 (3)
H10.114 (6)0.606 (2)0.586 (6)0.145 (15)*
O20.32968 (19)0.59006 (8)0.96702 (19)0.0455 (3)
C10.0385 (5)0.68801 (12)0.9733 (4)0.0563 (6)
H110.067 (4)0.6933 (14)1.116 (4)0.070 (8)*
H120.106 (5)0.7222 (17)0.917 (5)0.094 (10)*
H13−0.088 (4)0.6940 (15)0.925 (4)0.075 (9)*
C2−0.0220 (3)0.53869 (9)1.0246 (3)0.0371 (4)
H210.017 (3)0.5445 (12)1.163 (3)0.047 (6)*
H22−0.157 (3)0.5475 (12)0.984 (3)0.051 (6)*
P20.48253 (7)0.61724 (2)0.51341 (7)0.03302 (11)
O30.25753 (19)0.62778 (7)0.44442 (18)0.0412 (3)
O40.5560 (2)0.62903 (7)0.7409 (2)0.0421 (3)
H40.470 (5)0.6132 (18)0.826 (5)0.117 (12)*
C30.6086 (4)0.67852 (12)0.3826 (4)0.0501 (5)
H310.575 (4)0.7228 (16)0.410 (4)0.078 (8)*
H320.565 (4)0.6729 (14)0.247 (4)0.065 (8)*
H330.738 (4)0.6751 (15)0.426 (4)0.079 (9)*
C40.5508 (3)0.52908 (9)0.4481 (3)0.0343 (3)
H410.693 (3)0.5257 (11)0.494 (3)0.042 (5)*
H420.513 (3)0.5270 (11)0.311 (3)0.044 (6)*
U11U22U33U12U13U23
P10.0352 (2)0.0375 (2)0.0329 (2)−0.00097 (17)0.00569 (17)0.00385 (18)
O10.0359 (7)0.0712 (10)0.0338 (7)−0.0062 (6)0.0024 (5)0.0038 (6)
O20.0350 (7)0.0632 (9)0.0364 (7)−0.0004 (6)0.0030 (5)0.0047 (6)
C10.0677 (16)0.0365 (10)0.0624 (16)0.0033 (10)0.0087 (12)0.0018 (10)
C20.0403 (9)0.0362 (9)0.0361 (9)0.0017 (7)0.0108 (7)0.0015 (7)
P20.0359 (2)0.02862 (19)0.0346 (2)−0.00337 (16)0.00759 (17)0.00217 (17)
O30.0379 (7)0.0472 (7)0.0371 (7)0.0038 (5)0.0047 (5)0.0049 (5)
O40.0374 (7)0.0493 (8)0.0378 (7)−0.0064 (6)0.0037 (5)−0.0068 (6)
C30.0576 (14)0.0369 (10)0.0563 (13)−0.0105 (9)0.0133 (11)0.0095 (9)
C40.0380 (9)0.0299 (8)0.0357 (9)−0.0019 (7)0.0095 (7)0.0018 (7)
P1—O21.5096 (14)P2—O31.5115 (14)
P1—O11.5452 (15)P2—O41.5468 (14)
P1—C11.776 (2)P2—C31.779 (2)
P1—C21.7850 (19)P2—C41.7942 (19)
O1—H10.94 (4)O4—H40.95 (4)
C1—H110.96 (3)C3—H310.89 (3)
C1—H120.92 (3)C3—H320.92 (3)
C1—H130.86 (3)C3—H330.87 (3)
C2—C2i1.529 (3)C4—C4ii1.539 (3)
C2—H210.93 (2)C4—H410.95 (2)
C2—H220.91 (2)C4—H420.92 (2)
O2—P1—O1113.08 (8)O3—P2—O4112.74 (8)
O2—P1—C1110.24 (12)O3—P2—C3108.55 (11)
O1—P1—C1110.11 (12)O4—P2—C3109.08 (11)
O2—P1—C2108.23 (9)O3—P2—C4109.76 (8)
O1—P1—C2108.33 (9)O4—P2—C4109.63 (8)
C1—P1—C2106.60 (11)C3—P2—C4106.90 (11)
P1—O1—H1119 (2)P2—O4—H4118 (2)
P1—C1—H11112.0 (16)P2—C3—H31108.9 (18)
P1—C1—H12109.5 (19)P2—C3—H32110.5 (16)
H11—C1—H12110 (2)H31—C3—H32106 (2)
P1—C1—H13107.7 (19)P2—C3—H33109.7 (19)
H11—C1—H13110 (2)H31—C3—H33106 (3)
H12—C1—H13107 (3)H32—C3—H33115 (2)
C2i—C2—P1112.62 (17)C4ii—C4—P2111.78 (16)
C2i—C2—H21107.8 (14)C4ii—C4—H41108.8 (12)
P1—C2—H21110.3 (13)P2—C4—H41106.0 (12)
C2i—C2—H22109.4 (15)C4ii—C4—H42112.7 (13)
P1—C2—H22106.6 (14)P2—C4—H42105.1 (13)
H21—C2—H22110.1 (18)H41—C4—H42112.3 (17)
O2—P1—C2—C2i−61.3 (2)O3—P2—C4—C4ii−62.1 (2)
O1—P1—C2—C2i61.7 (2)O4—P2—C4—C4ii62.3 (2)
C1—P1—C2—C2i−179.8 (2)C3—P2—C4—C4ii−179.64 (19)
D—H···AD—HH···AD···AD—H···A
O4—H4···O20.95 (4)1.55 (4)2.504 (2)178 (3)
O1—H1···O30.94 (4)1.56 (4)2.499 (2)179 (4)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O4—H4⋯O20.95 (4)1.55 (4)2.504 (2)178 (3)
O1—H1⋯O30.94 (4)1.56 (4)2.499 (2)179 (4)
  1 in total

1.  Graph-set analysis of hydrogen-bond patterns in organic crystals.

Authors:  M C Etter; J C MacDonald; J Bernstein
Journal:  Acta Crystallogr B       Date:  1990-04-01
  1 in total
  3 in total

1.  (Dimethyl-phosphor-yl)methanaminium chloride.

Authors:  Guido J Reiss; Stefan Jörgens
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-09-08

2.  Pseudosymmetric fac-di-aqua-trichlorido[(di-methyl-phosphor-yl)methanaminium-κO]manganese(II).

Authors:  Guido J Reiss
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-04-10

3.  trans-Dichlorido-tetra-kis-[(di-methyl-phosphor-yl)methanaminium-κO]cobalt(II) tetra-chloridocobaltate(II).

Authors:  Guido J Reiss
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-04-10
  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.