Literature DB >> 21201398

Dicyclo-hexyl-ammonium thio-cyanate.

M Khawar Rauf, Masahiro Ebihara, Amin Badshah.   

Abstract

In the crystal structure of the title compound, C(12)H(24)N(+)·NCS(-), the anions and cations are linked through N-H⋯N and N-H⋯S hydrogen bonds, resulting in a chain along the a axis.

Entities:  

Year:  2008        PMID: 21201398      PMCID: PMC2960191          DOI: 10.1107/S1600536807067773

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Ng (1992 ▶, 1993 ▶, 1995a ▶,b ▶).

Experimental

Crystal data

C12H24N+·CNS− M = 240.40 Orthorhombic, a = 8.781 (2) Å b = 16.479 (4) Å c = 19.026 (4) Å V = 2753.2 (11) Å3 Z = 8 Mo Kα radiation μ = 0.21 mm−1 T = 123 (2) K 0.38 × 0.32 × 0.26 mm

Data collection

Rigaku/MSC Mercury CCD diffractometer Absorption correction: none 20885 measured reflections 3151 independent reflections 3014 reflections with I > 2σ(I) R int = 0.029

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.092 S = 1.20 3151 reflections 153 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.32 e Å−3 Δρmin = −0.17 e Å−3 Data collection: CrystalClear (Molecular Structure Corporation & Rigaku, 2001 ▶); cell refinement: CrystalClear; data reduction: TEXSAN (Rigaku/MSC, 2004 ▶); program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997 ▶); molecular graphics: ORTEPII (Johnson, 1976 ▶); software used to prepare material for publication: SHELXL97 and TEXSAN. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536807067773/hg2363sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536807067773/hg2363Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C12H24N+·CNSF000 = 1056
Mr = 240.40Dx = 1.160 Mg m3
Orthorhombic, PbcaMo Kα radiation λ = 0.71070 Å
Hall symbol: -P 2ac 2abCell parameters from 7454 reflections
a = 8.781 (2) Åθ = 3.2–27.5º
b = 16.479 (4) ŵ = 0.21 mm1
c = 19.026 (4) ÅT = 123 (2) K
V = 2753.2 (11) Å3Block, colorless
Z = 80.38 × 0.32 × 0.26 mm
Rigaku/MSC Mercury CCD diffractometer3014 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.029
Detector resolution: 14.62 pixels mm-1θmax = 27.5º
T = 123(2) Kθmin = 3.2º
ω scansh = −11→7
Absorption correction: nonek = −17→21
20885 measured reflectionsl = −23→24
3151 independent reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.041H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.092  w = 1/[σ2(Fo2) + (0.037P)2 + 1.0451P] where P = (Fo2 + 2Fc2)/3
S = 1.20(Δ/σ)max = 0.001
3151 reflectionsΔρmax = 0.32 e Å3
153 parametersΔρmin = −0.17 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.37002 (12)0.15566 (6)0.52333 (5)0.0141 (2)
H1A0.4620 (19)0.1381 (9)0.5417 (8)0.024 (4)*
H1B0.371 (2)0.2103 (11)0.5215 (9)0.028 (4)*
C10.36414 (14)0.12612 (7)0.44808 (6)0.0145 (2)
H10.37430.06570.44790.017*
C20.49937 (14)0.16257 (8)0.40919 (6)0.0176 (3)
H2A0.59520.14310.43080.021*
H2B0.49660.22240.41350.021*
C30.49638 (15)0.13897 (8)0.33142 (7)0.0209 (3)
H3A0.58200.16570.30670.025*
H3B0.50970.07950.32690.025*
C40.34657 (15)0.16400 (9)0.29723 (7)0.0220 (3)
H4A0.33720.22390.29800.026*
H4B0.34550.14610.24760.026*
C50.21236 (15)0.12627 (8)0.33614 (7)0.0208 (3)
H5A0.21690.06650.33140.025*
H5B0.11610.14510.31450.025*
C60.21305 (14)0.14887 (8)0.41423 (6)0.0173 (3)
H6A0.19580.20790.41930.021*
H6B0.12910.12020.43850.021*
C70.24518 (14)0.12773 (7)0.57191 (6)0.0151 (2)
H70.14500.14550.55220.018*
C80.26768 (15)0.16798 (8)0.64351 (6)0.0184 (3)
H8A0.26410.22770.63820.022*
H8B0.36870.15310.66270.022*
C90.14262 (17)0.14035 (8)0.69417 (7)0.0239 (3)
H9A0.15960.16530.74080.029*
H9B0.04240.15880.67650.029*
C100.14189 (17)0.04800 (8)0.70150 (7)0.0263 (3)
H10A0.23850.03000.72330.032*
H10B0.05720.03140.73270.032*
C110.12341 (16)0.00738 (8)0.62991 (7)0.0241 (3)
H11A0.02140.02030.61080.029*
H11B0.1302−0.05220.63570.029*
C120.24540 (15)0.03553 (7)0.57788 (7)0.0197 (3)
H12A0.34670.01680.59400.024*
H12B0.22550.01130.53120.024*
N20.36405 (13)0.32916 (7)0.50487 (6)0.0223 (2)
C130.29457 (14)0.35958 (7)0.45967 (7)0.0175 (3)
S10.19380 (4)0.40074 (2)0.396108 (18)0.02252 (11)
U11U22U33U12U13U23
N10.0148 (5)0.0155 (5)0.0121 (5)0.0004 (4)−0.0009 (4)0.0003 (4)
C10.0159 (6)0.0167 (5)0.0108 (5)−0.0004 (4)−0.0004 (4)−0.0018 (4)
C20.0130 (6)0.0258 (6)0.0141 (6)−0.0001 (5)0.0000 (5)−0.0015 (5)
C30.0170 (6)0.0309 (7)0.0146 (6)0.0008 (5)0.0024 (5)−0.0026 (5)
C40.0212 (7)0.0322 (7)0.0126 (6)−0.0012 (5)−0.0007 (5)0.0018 (5)
C50.0176 (6)0.0302 (7)0.0145 (6)−0.0033 (5)−0.0034 (5)−0.0002 (5)
C60.0134 (6)0.0237 (6)0.0147 (6)−0.0020 (5)−0.0001 (5)−0.0008 (5)
C70.0144 (6)0.0177 (5)0.0132 (6)−0.0002 (5)0.0015 (5)0.0016 (4)
C80.0208 (6)0.0204 (6)0.0142 (6)−0.0004 (5)0.0004 (5)−0.0010 (5)
C90.0269 (7)0.0285 (7)0.0161 (6)0.0002 (6)0.0050 (5)−0.0006 (5)
C100.0307 (7)0.0287 (7)0.0196 (7)−0.0019 (6)0.0054 (6)0.0078 (5)
C110.0258 (7)0.0218 (6)0.0248 (7)−0.0045 (5)0.0045 (6)0.0046 (5)
C120.0224 (6)0.0172 (6)0.0196 (6)−0.0016 (5)0.0031 (5)0.0008 (5)
N20.0192 (6)0.0197 (5)0.0279 (6)−0.0004 (4)0.0000 (5)−0.0013 (5)
C130.0151 (6)0.0149 (6)0.0226 (6)−0.0022 (5)0.0061 (5)−0.0035 (5)
S10.02052 (18)0.02481 (18)0.02222 (18)0.00004 (12)0.00086 (13)0.00398 (12)
N1—C71.5060 (16)C6—H6B0.9900
N1—C11.5132 (15)C7—C121.5237 (17)
N1—H1A0.926 (17)C7—C81.5280 (17)
N1—H1B0.901 (18)C7—H71.0000
C1—C61.5216 (17)C8—C91.5304 (18)
C1—C21.5226 (17)C8—H8A0.9900
C1—H11.0000C8—H8B0.9900
C2—C31.5301 (17)C9—C101.528 (2)
C2—H2A0.9900C9—H9A0.9900
C2—H2B0.9900C9—H9B0.9900
C3—C41.5244 (18)C10—C111.526 (2)
C3—H3A0.9900C10—H10A0.9900
C3—H3B0.9900C10—H10B0.9900
C4—C51.5243 (18)C11—C121.5304 (18)
C4—H4A0.9900C11—H11A0.9900
C4—H4B0.9900C11—H11B0.9900
C5—C61.5317 (17)C12—H12A0.9900
C5—H5A0.9900C12—H12B0.9900
C5—H5B0.9900N2—C131.1676 (18)
C6—H6A0.9900C13—S11.6448 (14)
C7—N1—C1117.23 (9)C5—C6—H6B109.5
C7—N1—H1A107.9 (10)H6A—C6—H6B108.1
C1—N1—H1A106.6 (10)N1—C7—C12110.47 (10)
C7—N1—H1B109.4 (11)N1—C7—C8108.69 (10)
C1—N1—H1B106.6 (11)C12—C7—C8111.48 (10)
H1A—N1—H1B108.8 (15)N1—C7—H7108.7
N1—C1—C6110.54 (10)C12—C7—H7108.7
N1—C1—C2107.84 (10)C8—C7—H7108.7
C6—C1—C2112.16 (10)C7—C8—C9109.85 (11)
N1—C1—H1108.7C7—C8—H8A109.7
C6—C1—H1108.7C9—C8—H8A109.7
C2—C1—H1108.7C7—C8—H8B109.7
C1—C2—C3110.87 (10)C9—C8—H8B109.7
C1—C2—H2A109.5H8A—C8—H8B108.2
C3—C2—H2A109.5C10—C9—C8110.90 (11)
C1—C2—H2B109.5C10—C9—H9A109.5
C3—C2—H2B109.5C8—C9—H9A109.5
H2A—C2—H2B108.1C10—C9—H9B109.5
C4—C3—C2111.02 (10)C8—C9—H9B109.5
C4—C3—H3A109.4H9A—C9—H9B108.0
C2—C3—H3A109.4C11—C10—C9110.85 (11)
C4—C3—H3B109.4C11—C10—H10A109.5
C2—C3—H3B109.4C9—C10—H10A109.5
H3A—C3—H3B108.0C11—C10—H10B109.5
C5—C4—C3110.46 (11)C9—C10—H10B109.5
C5—C4—H4A109.6H10A—C10—H10B108.1
C3—C4—H4A109.6C10—C11—C12111.70 (11)
C5—C4—H4B109.6C10—C11—H11A109.3
C3—C4—H4B109.6C12—C11—H11A109.3
H4A—C4—H4B108.1C10—C11—H11B109.3
C4—C5—C6111.65 (11)C12—C11—H11B109.3
C4—C5—H5A109.3H11A—C11—H11B107.9
C6—C5—H5A109.3C7—C12—C11110.47 (11)
C4—C5—H5B109.3C7—C12—H12A109.6
C6—C5—H5B109.3C11—C12—H12A109.6
H5A—C5—H5B108.0C7—C12—H12B109.6
C1—C6—C5110.73 (10)C11—C12—H12B109.6
C1—C6—H6A109.5H12A—C12—H12B108.1
C5—C6—H6A109.5N2—C13—S1178.68 (12)
C1—C6—H6B109.5
C7—N1—C1—C656.44 (13)C1—N1—C7—C1260.50 (14)
C7—N1—C1—C2179.38 (10)C1—N1—C7—C8−176.89 (10)
N1—C1—C2—C3−176.97 (10)N1—C7—C8—C9−179.73 (10)
C6—C1—C2—C3−55.03 (13)C12—C7—C8—C9−57.74 (14)
C1—C2—C3—C456.09 (14)C7—C8—C9—C1057.46 (14)
C2—C3—C4—C5−56.87 (15)C8—C9—C10—C11−56.47 (15)
C3—C4—C5—C656.52 (15)C9—C10—C11—C1255.21 (16)
N1—C1—C6—C5174.64 (10)N1—C7—C12—C11177.35 (10)
C2—C1—C6—C554.26 (13)C8—C7—C12—C1156.39 (14)
C4—C5—C6—C1−54.99 (14)C10—C11—C12—C7−54.95 (15)
D—H···AD—HH···AD···AD—H···A
N1—H1B···N20.901 (18)1.986 (19)2.8811 (17)172.8 (16)
N1—H1A···S1i0.926 (17)2.440 (17)3.3610 (13)172.8 (13)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1B⋯N20.901 (18)1.986 (19)2.8811 (17)172.8 (16)
N1—H1A⋯S1i0.926 (17)2.440 (17)3.3610 (13)172.8 (13)

Symmetry code: (i) .

  1 in total

1.  SHELXL: high-resolution refinement.

Authors:  G M Sheldrick; T R Schneider
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

  1 in total
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1.  4-Chloro-anilinium thio-cyanate.

Authors:  Siti Fairus M Yusoff; F Salem Halima; Bohari M Yamin
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-06-02

2.  Dicyclo-hexyl-ammonium thio-cyanate: monoclinic polymorph.

Authors:  N Selvakumaran; R Karvembu; Seik Weng Ng; Edward R T Tiekink
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-10-05

3.  2-Amino-cyclo-hexan-1-aminium thio-cyanate.

Authors:  Halima F Salem; Siti Aishah Hasbullah; Bohari M Yamin
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-05-16

4.  Crystal structure of di-cyclo-hexyl-ammonium nitrate(V).

Authors:  Tomasz Rojek; Ewa Matczak-Jon
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-10-24
  4 in total

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