Literature DB >> 21201044

(5,5'-Dimethyl-2,2'-bipyridine-κN,N')diiodidomercury(II).

Nasim Tadayon Pour, Amin Ebadi, Anita Abedi, Vahid Amani, Hamid Reza Khavasi.   

Abstract

In the mol-ecule of the title compound, [HgI(2)(C(12)H(12)N(2))], the Hg(II) atom is four-coordinated in a distorted tetra-hedral configuration by two N atoms from 5,5'-dimethyl-2,2'-bipyridine and two I atoms. There is a π-π contact between pyridine rings of adjacent molecules [centroid-centroid distance = 3.723 (5) Å].

Entities:  

Year:  2008        PMID: 21201044      PMCID: PMC2959332          DOI: 10.1107/S160053680802953X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Ahmadi, Kalateh et al. (2008 ▶); Ahmadi, Khalighi et al. (2008 ▶); Chen et al. (2006 ▶); Freire et al. (1999 ▶); Htoon & Ladd (1976 ▶); Khalighi et al. (2008 ▶); Khavasi et al. (2008 ▶); Yousefi, Khalighi, et al. (2008 ▶); Yousefi, Tadayon Pour et al. (2008 ▶).

Experimental

Crystal data

[HgI2(C12H12N2)] M = 638.63 Orthorhombic, a = 15.0325 (8) Å b = 15.0654 (8) Å c = 14.0579 (10) Å V = 3183.7 (3) Å3 Z = 8 Mo Kα radiation μ = 13.53 mm−1 T = 298 (2) K 0.35 × 0.31 × 0.20 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: numerical [shape of crystal determined optically (X-SHAPE and X-RED32; Stoe & Cie (2005) ▶] T min = 0.015, T max = 0.075 23007 measured reflections 4306 independent reflections 3418 reflections with I > 2σ(I) R int = 0.083

Refinement

R[F 2 > 2σ(F 2)] = 0.055 wR(F 2) = 0.124 S = 1.19 4306 reflections 154 parameters H-atom parameters constrained Δρmax = 1.44 e Å−3 Δρmin = −1.51 e Å−3 Data collection: SMART (Bruker, 1998 ▶); cell refinement: SAINT (Bruker, 1998 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks I. DOI: 10.1107/S160053680802953X/hk2531sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053680802953X/hk2531Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[HgI2(C12H12N2)]F(000) = 2272
Mr = 638.63Dx = 2.665 Mg m3
Orthorhombic, PbcaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2abCell parameters from 1768 reflections
a = 15.0325 (8) Åθ = 2.4–29.3°
b = 15.0654 (8) ŵ = 13.53 mm1
c = 14.0579 (10) ÅT = 298 K
V = 3183.7 (3) Å3Prism, colorless
Z = 80.35 × 0.31 × 0.20 mm
Bruker SMART CCD area-detector diffractometer4306 independent reflections
Radiation source: fine-focus sealed tube3418 reflections with I > 2σ(I)
graphiteRint = 0.083
φ and ω scansθmax = 29.3°, θmin = 2.4°
Absorption correction: numerical shape of crystal determined optically (X-SHAPE and X-RED32; Stoe& Cie, 2005)h = −20→19
Tmin = 0.015, Tmax = 0.075k = −20→17
23007 measured reflectionsl = −19→19
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.055Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.124H-atom parameters constrained
S = 1.19w = 1/[σ2(Fo2) + (0.0347P)2 + 17.4498P] where P = (Fo2 + 2Fc2)/3
4306 reflections(Δ/σ)max = 0.010
154 parametersΔρmax = 1.44 e Å3
0 restraintsΔρmin = −1.51 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Hg10.11964 (2)0.71065 (2)0.60202 (3)0.05197 (12)
I10.00810 (7)0.80915 (5)0.50004 (7)0.0859 (3)
I20.25140 (5)0.76000 (5)0.71769 (6)0.0687 (2)
N10.1696 (4)0.5812 (5)0.5214 (5)0.0403 (14)
N20.0387 (4)0.5836 (4)0.6554 (5)0.0381 (13)
C10.2371 (5)0.5833 (6)0.4598 (6)0.0463 (18)
H10.26330.63770.44600.056*
C20.2697 (6)0.5082 (7)0.4155 (6)0.049 (2)
C30.3485 (8)0.5156 (9)0.3481 (9)0.077 (3)
H3A0.39860.53990.38160.093*
H3B0.33330.55380.29590.093*
H3C0.36350.45780.32430.093*
C40.2299 (7)0.4279 (7)0.4391 (8)0.063 (3)
H40.25060.37550.41210.076*
C50.1604 (7)0.4257 (6)0.5019 (7)0.053 (2)
H50.13240.37230.51620.063*
C60.1322 (5)0.5044 (5)0.5440 (5)0.0387 (16)
C70.0586 (5)0.5057 (5)0.6156 (5)0.0378 (15)
C80.0140 (6)0.4291 (6)0.6412 (7)0.054 (2)
H80.02700.37540.61180.065*
C9−0.0503 (6)0.4341 (6)0.7113 (7)0.054 (2)
H9−0.08050.38290.72970.065*
C10−0.0703 (6)0.5135 (6)0.7542 (6)0.0477 (19)
C11−0.1370 (7)0.5206 (8)0.8337 (8)0.069 (3)
H11A−0.18310.56150.81590.083*
H11B−0.10780.54170.89010.083*
H11C−0.16250.46330.84580.083*
C12−0.0244 (5)0.5873 (6)0.7226 (6)0.0465 (18)
H12−0.03790.64220.74920.056*
U11U22U33U12U13U23
Hg10.0544 (2)0.04113 (17)0.0603 (2)0.00092 (15)0.00422 (17)−0.00082 (14)
I10.0978 (6)0.0521 (4)0.1078 (7)0.0131 (4)−0.0354 (5)0.0050 (4)
I20.0660 (4)0.0555 (4)0.0845 (5)0.0031 (3)−0.0154 (4)−0.0110 (3)
N10.039 (3)0.044 (3)0.037 (3)0.001 (3)0.003 (3)−0.002 (3)
N20.035 (3)0.039 (3)0.041 (3)0.002 (3)0.000 (3)0.001 (3)
C10.040 (4)0.053 (5)0.046 (4)−0.002 (4)0.009 (3)−0.006 (4)
C20.041 (4)0.072 (6)0.035 (4)0.012 (4)0.000 (3)−0.002 (4)
C30.061 (6)0.098 (9)0.073 (7)0.016 (6)0.029 (6)−0.004 (6)
C40.070 (7)0.058 (6)0.062 (6)0.019 (5)0.001 (5)−0.020 (5)
C50.058 (5)0.045 (4)0.056 (5)0.003 (4)0.004 (4)−0.002 (4)
C60.038 (4)0.038 (4)0.040 (4)0.001 (3)−0.004 (3)−0.002 (3)
C70.039 (4)0.040 (4)0.035 (4)0.003 (3)−0.009 (3)−0.001 (3)
C80.057 (5)0.047 (5)0.058 (5)−0.009 (4)−0.004 (4)−0.002 (4)
C90.051 (5)0.051 (5)0.062 (6)−0.016 (4)0.003 (4)0.007 (4)
C100.038 (4)0.057 (5)0.048 (5)−0.001 (4)−0.005 (3)0.010 (4)
C110.059 (6)0.080 (7)0.067 (6)−0.001 (5)0.031 (5)0.000 (5)
C120.042 (4)0.048 (4)0.050 (5)0.003 (4)0.009 (4)−0.003 (4)
Hg1—I12.6587 (9)C6—N11.325 (10)
Hg1—I22.6684 (8)C6—C71.496 (11)
Hg1—N12.377 (7)C7—N21.335 (10)
Hg1—N22.389 (6)C7—C81.382 (12)
C1—N11.335 (10)C8—C91.384 (14)
C1—C21.380 (13)C8—H80.9300
C1—H10.9300C9—C101.373 (13)
C2—C41.390 (15)C9—H90.9300
C2—C31.521 (13)C10—C121.382 (12)
C3—H3A0.9600C10—C111.505 (13)
C3—H3B0.9600C11—H11A0.9600
C3—H3C0.9600C11—H11B0.9600
C4—C51.368 (14)C11—H11C0.9600
C4—H40.9300C12—N21.339 (10)
C5—C61.392 (11)C12—H120.9300
C5—H50.9300
I1—Hg1—I2129.89 (3)C4—C5—C6119.1 (9)
N1—Hg1—I1113.59 (16)C4—C5—H5120.5
N1—Hg1—N269.7 (2)C6—C5—H5120.5
N1—Hg1—I2106.53 (16)N1—C6—C5120.9 (8)
N2—Hg1—I1107.15 (15)N1—C6—C7117.6 (7)
N2—Hg1—I2114.22 (15)C5—C6—C7121.5 (7)
C1—N1—Hg1122.0 (6)N2—C7—C8121.1 (8)
C6—N1—Hg1117.9 (5)N2—C7—C6117.4 (7)
C6—N1—C1119.9 (7)C8—C7—C6121.5 (7)
C7—N2—Hg1117.3 (5)C7—C8—C9118.7 (9)
C7—N2—C12119.4 (7)C7—C8—H8120.7
C12—N2—Hg1123.3 (5)C9—C8—H8120.7
N1—C1—C2122.9 (9)C10—C9—C8120.8 (8)
N1—C1—H1118.5C10—C9—H9119.6
C2—C1—H1118.5C8—C9—H9119.6
C1—C2—C4116.9 (8)C9—C10—C12116.8 (8)
C1—C2—C3119.9 (10)C9—C10—C11122.3 (9)
C4—C2—C3123.2 (9)C12—C10—C11120.9 (9)
C2—C3—H3A109.5C10—C11—H11A109.5
C2—C3—H3B109.5C10—C11—H11B109.5
H3A—C3—H3B109.5H11A—C11—H11B109.5
C2—C3—H3C109.5C10—C11—H11C109.5
H3A—C3—H3C109.5H11A—C11—H11C109.5
H3B—C3—H3C109.5H11B—C11—H11C109.5
C5—C4—C2120.3 (9)N2—C12—C10123.2 (8)
C5—C4—H4119.8N2—C12—H12118.4
C2—C4—H4119.8C10—C12—H12118.4
I1—Hg1—N1—C182.9 (6)C5—C6—N1—C1−2.1 (12)
I1—Hg1—N1—C6−101.5 (5)C7—C6—N1—C1178.3 (7)
I2—Hg1—N1—C1−66.4 (6)C5—C6—N1—Hg1−177.8 (6)
I2—Hg1—N1—C6109.2 (5)C7—C6—N1—Hg12.6 (9)
N2—Hg1—N1—C1−176.7 (7)N1—C6—C7—N2−3.3 (11)
N2—Hg1—N1—C6−1.1 (5)C5—C6—C7—N2177.1 (8)
I1—Hg1—N2—C7108.7 (5)N1—C6—C7—C8178.0 (8)
I1—Hg1—N2—C12−71.7 (6)C5—C6—C7—C8−1.6 (12)
I2—Hg1—N2—C7−100.3 (5)C8—C7—N2—C121.4 (12)
I2—Hg1—N2—C1279.3 (6)C6—C7—N2—C12−177.3 (7)
N1—Hg1—N2—C7−0.8 (5)C8—C7—N2—Hg1−179.0 (6)
N1—Hg1—N2—C12178.9 (7)C6—C7—N2—Hg12.3 (9)
C2—C1—N1—C61.5 (13)N2—C7—C8—C9−1.9 (13)
C2—C1—N1—Hg1177.0 (6)C6—C7—C8—C9176.7 (8)
N1—C1—C2—C4−1.1 (13)C7—C8—C9—C100.6 (15)
N1—C1—C2—C3−178.3 (9)C8—C9—C10—C121.2 (14)
C1—C2—C4—C51.4 (14)C8—C9—C10—C11−177.2 (9)
C3—C2—C4—C5178.5 (10)C9—C10—C12—N2−1.8 (13)
C2—C4—C5—C6−2.1 (15)C11—C10—C12—N2176.6 (9)
C4—C5—C6—N12.5 (14)C10—C12—N2—C70.6 (13)
C4—C5—C6—C7−178.0 (8)C10—C12—N2—Hg1−179.1 (6)
Hg1—I12.6587 (9)
Hg1—I22.6684 (8)
Hg1—N12.377 (7)
Hg1—N22.389 (6)
I1—Hg1—I2129.89 (3)
N1—Hg1—I1113.59 (16)
N1—Hg1—N269.7 (2)
N1—Hg1—I2106.53 (16)
N2—Hg1—I1107.15 (15)
N2—Hg1—I2114.22 (15)
  6 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  catena-Poly[[(5,5'-dimethyl- 2,2'-bipyridine-κN,N')cadmium(II)]-di-μ-chlorido].

Authors:  Roya Ahmadi; Aida Khalighi; Khadijeh Kalateh; Vahid Amani; Hamid Reza Khavasi
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-09-06

3.  Dichlorido(5,5'-dimethyl-2,2'-bipyridine-κN,N')zinc(II).

Authors:  Aida Khalighi; Roya Ahmadi; Vahid Amani; Hamid Reza Khavasi
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-08-30

4.  Diaqua-(2,2'-bipyridine-5,5'-dicarboxyl-ato-κN,N')(ethyl-enediamine-κN,N')copper(II) 2.5-hydrate.

Authors:  Mohammad Yousefi; Aida Khalighi; Nasim Tadayon Pour; Vahid Amani; Hamid Reza Khavasi
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-09-20

5.  Dichlorido(6-methyl-2,2'-bipyridine-κN,N')zinc(II).

Authors:  Roya Ahmadi; Khadijeh Kalateh; Amin Ebadi; Vahid Amani; Hamid Reza Khavasi
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-09-13

6.  (4,4'-Dimethyl-2,2'-bipyridine-κN,N')diiodidomercury(II).

Authors:  Mohammad Yousefi; Nasim Tadayon Pour; Vahid Amani; Hamid Reza Khavasi
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-09-13
  6 in total
  14 in total

1.  5,5'-Dimethyl-2,2'-bipyridine.

Authors:  Zeinab Khoshtarkib; Amin Ebadi; Roya Ahmadi; Robabeh Alizadeh
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-06-17

2.  Di-μ-bromido-bis-[bromido(4,4'-dimethyl-2,2'-bipyridine-κN,N')mercury(II)].

Authors:  Khadijeh Kalateh; Amin Ebadi; Roya Ahmadi; Vahid Amani; Hamid Reza Khavasi
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-10-15

3.  Dichlorido(di-2-pyridylamine)mercury(II).

Authors:  Mohammad Yousefi; Mohammad Reza Allahgholi Ghasri; Amene Heidari; Vahid Amani
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-12-06

4.  Trichlorido(5,5'-dimethyl-2,2'-bipyridine-κN,N')(methanol-κO)indium(III).

Authors:  Khadijeh Kalateh; Roya Ahmadi; Amin Ebadi; Vahid Amani; Hamid Reza Khavasi
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-10-04

5.  (4,7-Diphenyl-1,10-phenanthroline-κN,N')diiodidomercury(II).

Authors:  Mohammad Yousefi; Rabin Rashidi Vahid; Vahid Amani; Mansour Arab Chamjangali; Hamid Reza Khavasi
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-09-27

6.  Dichlorido(6-methyl-2,2'-bipyridine-κN,N')mercury(II).

Authors:  Roya Ahmadi; Amin Ebadi; Khadijeh Kalateh; Ali Norouzi; Vahid Amani
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-10-15

7.  Dibromido(2,9-dimethyl-1,10-phenanthroline-κN,N')mercury(II).

Authors:  Robabeh Alizadeh; Amene Heidari; Roya Ahmadi; Vahid Amani
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-04-02

8.  catena-Poly[[(5,5'-dimethyl-2,2'-bi-pyridine-κN,N')cadmium(II)]-di-μ-iodido].

Authors:  Roya Ahmadi; Khadijeh Kalateh; Vahid Amani
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-04-24

9.  (2,9-Dimethyl-4,7-diphenyl-1,10-phen-anthroline-κN,N')bis-(thio-cyanato-κS)mercury(II).

Authors:  Robabeh Alizadeh
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-06-24

10.  Trichlorido(5,5'-dimethyl-2,2'-bipyridine-κ(2) N,N')(dimethyl-formamide-κO)indium(III) hemihydrate.

Authors:  Sadif A Shirvan; Sara Haydari Dezfuli; Fereydoon Khazali; Manouchehr Aghajeri; Ali Borsalani
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-11-03
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