Literature DB >> 21581552

Dichlorido(di-2-pyridylamine)mercury(II).

Mohammad Yousefi, Mohammad Reza Allahgholi Ghasri, Amene Heidari, Vahid Amani.   

Abstract

In the mol-ecule of the title compound, [HgCl(2)(C(10)H(9)N(3))], the Hg(II) atom is four-coordinated in a distorted tetra-hedral configuration by two N atoms from the chelating di-2-pyridylamine ligand and by two Cl atoms. In the crystal structure, inter-molecular N-H⋯Cl hydrogen bonds link the mol-ecules into centrosymmetric dimers. There is a π-π contact between the pyridine rings [centroid-centroid distance = 3.896 (5) Å].

Entities:  

Year:  2008        PMID: 21581552      PMCID: PMC2967852          DOI: 10.1107/S1600536808040294

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Ahmadi et al. (2008 ▶); Kalateh, Ebadi et al. (2008 ▶); Kalateh, Norouzi et al. (2008 ▶); Khavasi et al. (2008 ▶); Tadayon Pour et al. (2008 ▶); Yousefi, Rashidi Vahid et al. (2008 ▶); Yousefi, Tadayon Pour et al. (2008 ▶). For related structures, see: Chen et al. (2006 ▶); Liu et al. (2004 ▶). For bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

[HgCl2(C10H9N3)] M = 442.69 Triclinic, a = 8.0268 (12) Å b = 8.6127 (11) Å c = 9.6118 (14) Å α = 110.606 (11)° β = 98.958 (12)° γ = 96.862 (11)° V = 603.38 (15) Å3 Z = 2 Mo Kα radiation μ = 13.17 mm−1 T = 298 (2) K 0.24 × 0.21 × 0.15 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi scan (SADABS; Sheldrick, 1998 ▶) T min = 0.061, T max = 0.142 7105 measured reflections 3214 independent reflections 2806 reflections with I > 2σ(I) R int = 0.069

Refinement

R[F 2 > 2σ(F 2)] = 0.046 wR(F 2) = 0.126 S = 1.05 3214 reflections 150 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 2.43 e Å−3 Δρmin = −2.08 e Å−3 Data collection: SMART (Bruker, 1998 ▶); cell refinement: SAINT (Bruker, 1998 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808040294/hk2588sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808040294/hk2588Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[HgCl2(C10H9N3)]Z = 2
Mr = 442.69F(000) = 408
Triclinic, P1Dx = 2.437 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 8.0268 (12) ÅCell parameters from 1652 reflections
b = 8.6127 (11) Åθ = 2.6–29.2°
c = 9.6118 (14) ŵ = 13.17 mm1
α = 110.606 (11)°T = 298 K
β = 98.958 (12)°Block, colorless
γ = 96.862 (11)°0.24 × 0.21 × 0.15 mm
V = 603.38 (15) Å3
Bruker SMART CCD area-detector diffractometer3214 independent reflections
Radiation source: fine-focus sealed tube2806 reflections with I > 2σ(I)
graphiteRint = 0.069
φ and ω scansθmax = 29.2°, θmin = 2.6°
Absorption correction: multi scan (SADABS; Sheldrick, 1998)h = −10→10
Tmin = 0.061, Tmax = 0.142k = −11→11
7105 measured reflectionsl = −13→12
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.046H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.126w = 1/[σ2(Fo2) + (0.075P)2 + 0.8992P] where P = (Fo2 + 2Fc2)/3
S = 1.05(Δ/σ)max = 0.026
3214 reflectionsΔρmax = 2.43 e Å3
150 parametersΔρmin = −2.08 e Å3
0 restraintsExtinction correction: SHELXTL (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.048 (3)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Hg10.21151 (4)0.24646 (4)0.63832 (4)0.06055 (18)
Cl10.4456 (3)0.1830 (3)0.7818 (3)0.0683 (5)
Cl2−0.0856 (2)0.1450 (2)0.6448 (2)0.0553 (4)
N10.1944 (8)0.5364 (8)0.7382 (7)0.0497 (12)
N20.2047 (8)0.5833 (7)0.5110 (6)0.0459 (11)
N30.2876 (7)0.3143 (7)0.4439 (7)0.0447 (11)
C10.1758 (12)0.5982 (12)0.8836 (9)0.0636 (19)
H10.18620.52940.93930.076*
C20.1428 (12)0.7553 (13)0.9537 (9)0.069 (2)
H20.12850.79201.05370.083*
H2B0.186 (18)0.662 (18)0.464 (16)0.10 (4)*
C30.1312 (11)0.8591 (11)0.8713 (9)0.0624 (18)
H30.11150.96830.91570.075*
C40.1493 (9)0.7975 (9)0.7231 (8)0.0514 (14)
H40.13790.86350.66490.062*
C50.1848 (7)0.6352 (7)0.6597 (7)0.0398 (11)
C60.2674 (7)0.4531 (7)0.4151 (7)0.0395 (10)
C70.3045 (9)0.4711 (10)0.2836 (7)0.0499 (13)
H70.28490.56560.26270.060*
C80.3715 (12)0.3449 (13)0.1842 (10)0.067 (2)
H80.40060.35590.09770.080*
C90.3935 (9)0.2066 (10)0.2156 (9)0.0587 (18)
H90.43650.12080.14980.070*
C100.3524 (9)0.1931 (9)0.3444 (10)0.0556 (16)
H100.36940.09760.36480.067*
U11U22U33U12U13U23
Hg10.0618 (2)0.0660 (2)0.0781 (3)0.02555 (14)0.02487 (14)0.04774 (18)
Cl10.0653 (11)0.0710 (11)0.0816 (13)0.0210 (9)0.0091 (9)0.0445 (10)
Cl20.0623 (9)0.0551 (8)0.0628 (9)0.0170 (7)0.0277 (7)0.0314 (7)
N10.051 (3)0.058 (3)0.050 (3)0.019 (2)0.014 (2)0.027 (2)
N20.059 (3)0.043 (2)0.045 (3)0.016 (2)0.015 (2)0.024 (2)
N30.043 (2)0.041 (2)0.056 (3)0.006 (2)0.013 (2)0.023 (2)
C10.072 (5)0.078 (5)0.051 (4)0.020 (4)0.017 (3)0.033 (4)
C20.071 (5)0.084 (6)0.047 (4)0.019 (4)0.012 (3)0.017 (4)
C30.066 (4)0.061 (4)0.052 (4)0.013 (4)0.015 (3)0.009 (3)
C40.053 (3)0.045 (3)0.052 (3)0.007 (3)0.008 (3)0.014 (3)
C50.035 (2)0.043 (3)0.043 (3)0.006 (2)0.007 (2)0.019 (2)
C60.037 (2)0.040 (3)0.042 (3)0.005 (2)0.008 (2)0.017 (2)
C70.052 (3)0.060 (4)0.046 (3)0.017 (3)0.015 (2)0.026 (3)
C80.064 (4)0.088 (6)0.057 (4)0.013 (4)0.025 (3)0.032 (4)
C90.045 (3)0.054 (4)0.063 (4)0.008 (3)0.018 (3)0.003 (3)
C100.049 (3)0.047 (3)0.072 (4)0.011 (3)0.020 (3)0.021 (3)
Cl1—Hg12.3875 (19)C5—N11.323 (8)
Cl2—Hg12.4579 (19)C5—N21.381 (8)
N1—Hg12.369 (6)C6—N31.341 (8)
N2—H2B0.95 (14)C6—N21.383 (8)
N3—Hg12.290 (6)C6—C71.398 (9)
C1—N11.349 (10)C7—C81.397 (11)
C1—C21.363 (13)C7—H70.9300
C1—H10.9300C8—C91.352 (14)
C2—C31.390 (14)C8—H80.9300
C2—H20.9300C9—C101.369 (12)
C3—C41.372 (11)C9—H90.9300
C3—H30.9300C10—N31.362 (9)
C4—C51.399 (9)C10—H100.9300
C4—H40.9300
N1—Hg1—Cl1112.30 (15)N2—C6—C7116.6 (5)
N1—Hg1—Cl294.92 (15)C8—C7—C6119.0 (7)
N3—Hg1—Cl1112.21 (15)C8—C7—H7120.5
N3—Hg1—Cl2123.92 (14)C6—C7—H7120.5
N3—Hg1—N182.4 (2)C9—C8—C7119.0 (7)
Cl1—Hg1—Cl2120.14 (7)C9—C8—H8120.6
N1—C1—C2123.8 (8)C7—C8—H8120.4
N1—C1—H1118.1C8—C9—C10119.9 (7)
C2—C1—H1118.1C8—C9—H9120.0
C1—C2—C3117.9 (8)C10—C9—H9120.1
C1—C2—H2121.0N3—C10—C9122.5 (7)
C3—C2—H2121.0N3—C10—H10118.7
C4—C3—C2118.7 (8)C9—C10—H10118.8
C4—C3—H3120.6C5—N1—C1118.4 (7)
C2—C3—H3120.7C5—N1—Hg1125.5 (4)
C3—C4—C5119.9 (7)C1—N1—Hg1115.7 (5)
C3—C4—H4120.1C6—N2—C5136.0 (5)
C5—C4—H4120.0C6—N2—H2B109 (8)
N1—C5—N2122.3 (6)C5—N2—H2B115 (8)
N1—C5—C4121.1 (6)C6—N3—C10118.2 (6)
N2—C5—C4116.6 (6)C6—N3—Hg1127.3 (4)
N3—C6—N2122.1 (6)C10—N3—Hg1114.4 (5)
N3—C6—C7121.3 (6)
C1—N1—Hg1—N3−169.7 (6)C6—C7—C8—C92.0 (12)
C5—N1—Hg1—N317.3 (5)C7—C8—C9—C10−0.9 (13)
C1—N1—Hg1—Cl1−58.7 (6)C8—C9—C10—N30.6 (12)
C1—N1—Hg1—Cl266.7 (6)N2—C5—N1—C1179.1 (7)
C5—N1—Hg1—Cl1128.2 (5)C4—C5—N1—C1−2.6 (10)
C5—N1—Hg1—Cl2−106.3 (5)N2—C5—N1—Hg1−8.1 (9)
C6—N3—Hg1—N1−15.5 (5)C4—C5—N1—Hg1170.3 (5)
C10—N3—Hg1—N1168.0 (5)C2—C1—N1—C51.9 (13)
C6—N3—Hg1—Cl1−126.5 (5)C2—C1—N1—Hg1−171.6 (7)
C10—N3—Hg1—Cl157.0 (5)N3—C6—N2—C517.7 (11)
C6—N3—Hg1—Cl275.3 (5)C7—C6—N2—C5−164.1 (7)
C10—N3—Hg1—Cl2−101.2 (5)N1—C5—N2—C6−15.3 (11)
N1—C1—C2—C3−1.4 (15)C4—C5—N2—C6166.3 (7)
C1—C2—C3—C41.5 (14)N2—C6—N3—C10−179.2 (6)
C2—C3—C4—C5−2.3 (12)C7—C6—N3—C102.7 (9)
C3—C4—C5—N12.8 (10)N2—C6—N3—Hg14.5 (8)
C3—C4—C5—N2−178.7 (7)C7—C6—N3—Hg1−173.7 (5)
N3—C6—C7—C8−3.0 (10)C9—C10—N3—C6−1.5 (10)
N2—C6—C7—C8178.7 (7)C9—C10—N3—Hg1175.3 (6)
D—H···AD—HH···AD···AD—H···A
N2—H2B···Cl2i0.95 (16)2.41 (16)3.345 (6)169 (13)
Cl1—Hg12.3875 (19)
Cl2—Hg12.4579 (19)
N1—Hg12.369 (6)
N3—Hg12.290 (6)
N1—Hg1—Cl1112.30 (15)
N1—Hg1—Cl294.92 (15)
N3—Hg1—Cl1112.21 (15)
N3—Hg1—Cl2123.92 (14)
N3—Hg1—N182.4 (2)
Cl1—Hg1—Cl2120.14 (7)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2B⋯Cl2i0.95 (16)2.41 (16)3.345 (6)169 (13)

Symmetry code: (i) .

  8 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Blue phosphorescent Zn(II) and orange phosphorescent Pt(II) complexes of 4,4'-diphenyl-6,6'-dimethyl-2,2'-bipyrimidine.

Authors:  Qin-De Liu; Ruiyao Wang; Suning Wang
Journal:  Dalton Trans       Date:  2004-06-09       Impact factor: 4.390

3.  Di-μ-bromido-bis-[bromido(4,4'-dimethyl-2,2'-bipyridine-κN,N')mercury(II)].

Authors:  Khadijeh Kalateh; Amin Ebadi; Roya Ahmadi; Vahid Amani; Hamid Reza Khavasi
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-10-15

4.  (4,7-Diphenyl-1,10-phenanthroline-κN,N')diiodidomercury(II).

Authors:  Mohammad Yousefi; Rabin Rashidi Vahid; Vahid Amani; Mansour Arab Chamjangali; Hamid Reza Khavasi
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-09-27

5.  Dichlorido(6-methyl-2,2'-bipyridine-κN,N')mercury(II).

Authors:  Roya Ahmadi; Amin Ebadi; Khadijeh Kalateh; Ali Norouzi; Vahid Amani
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-10-15

6.  (5,5'-Dimethyl-2,2'-bipyridine-κN,N')diiodidomercury(II).

Authors:  Nasim Tadayon Pour; Amin Ebadi; Anita Abedi; Vahid Amani; Hamid Reza Khavasi
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-09-20

7.  (4,4'-Dimethyl-2,2'-bipyridine-κN,N')diiodidomercury(II).

Authors:  Mohammad Yousefi; Nasim Tadayon Pour; Vahid Amani; Hamid Reza Khavasi
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-09-13

8.  Dibromido(di-2-pyridylamine-κN,N')mercury(II).

Authors:  Khadijeh Kalateh; Ali Norouzi; Amin Ebadi; Roya Ahmadi; Vahid Amani
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-11-20
  8 in total
  4 in total

1.  Dibromido(2,9-dimethyl-1,10-phenanthroline-κN,N')mercury(II).

Authors:  Robabeh Alizadeh; Amene Heidari; Roya Ahmadi; Vahid Amani
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-04-02

2.  (2,9-Dimethyl-4,7-diphenyl-1,10-phen-anthroline-κN,N')bis-(thio-cyanato-κS)mercury(II).

Authors:  Robabeh Alizadeh
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-06-24

3.  Dichlorido(2,9-dimethyl-4,7-diphenyl-1,10-phenanthroline-κN,N')mercury(II) acetonitrile hemisolvate.

Authors:  Roya Ahmadi; Khadijeh Kalateh; Robabeh Alizadeh; Zeinab Khoshtarkib; Vahid Amani
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-07-01

4.  Trichlorido(dimethyl sulfoxide-κO)(di-2-pyridyl-amine-κ(2)N,N')indium(III).

Authors:  Sadif A Shirvan; Sara Haydari Dezfuli; Elyas Golabi
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-09-12
  4 in total

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