| Literature DB >> 21581552 |
Mohammad Yousefi, Mohammad Reza Allahgholi Ghasri, Amene Heidari, Vahid Amani.
Abstract
In the mol-ecule of the title compound, [HgCl(2)(C(10)H(9)N(3))], the Hg(II) atom is four-coordinated in a distorted tetra-hedral configuration by two N atoms from the chelating di-2-pyridylamine ligand and by two Cl atoms. In the crystal structure, inter-molecular N-H⋯Cl hydrogen bonds link the mol-ecules into centrosymmetric dimers. There is a π-π contact between the pyridine rings [centroid-centroid distance = 3.896 (5) Å].Entities:
Year: 2008 PMID: 21581552 PMCID: PMC2967852 DOI: 10.1107/S1600536808040294
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [HgCl2(C10H9N3)] | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 1652 reflections | |
| θ = 2.6–29.2° | |
| µ = 13.17 mm−1 | |
| α = 110.606 (11)° | |
| β = 98.958 (12)° | Block, colorless |
| γ = 96.862 (11)° | 0.24 × 0.21 × 0.15 mm |
| Bruker SMART CCD area-detector diffractometer | 3214 independent reflections |
| Radiation source: fine-focus sealed tube | 2806 reflections with |
| graphite | |
| φ and ω scans | θmax = 29.2°, θmin = 2.6° |
| Absorption correction: multi scan ( | |
| 7105 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max = 0.026 | |
| 3214 reflections | Δρmax = 2.43 e Å−3 |
| 150 parameters | Δρmin = −2.08 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.048 (3) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Hg1 | 0.21151 (4) | 0.24646 (4) | 0.63832 (4) | 0.06055 (18) | |
| Cl1 | 0.4456 (3) | 0.1830 (3) | 0.7818 (3) | 0.0683 (5) | |
| Cl2 | −0.0856 (2) | 0.1450 (2) | 0.6448 (2) | 0.0553 (4) | |
| N1 | 0.1944 (8) | 0.5364 (8) | 0.7382 (7) | 0.0497 (12) | |
| N2 | 0.2047 (8) | 0.5833 (7) | 0.5110 (6) | 0.0459 (11) | |
| N3 | 0.2876 (7) | 0.3143 (7) | 0.4439 (7) | 0.0447 (11) | |
| C1 | 0.1758 (12) | 0.5982 (12) | 0.8836 (9) | 0.0636 (19) | |
| H1 | 0.1862 | 0.5294 | 0.9393 | 0.076* | |
| C2 | 0.1428 (12) | 0.7553 (13) | 0.9537 (9) | 0.069 (2) | |
| H2 | 0.1285 | 0.7920 | 1.0537 | 0.083* | |
| H2B | 0.186 (18) | 0.662 (18) | 0.464 (16) | 0.10 (4)* | |
| C3 | 0.1312 (11) | 0.8591 (11) | 0.8713 (9) | 0.0624 (18) | |
| H3 | 0.1115 | 0.9683 | 0.9157 | 0.075* | |
| C4 | 0.1493 (9) | 0.7975 (9) | 0.7231 (8) | 0.0514 (14) | |
| H4 | 0.1379 | 0.8635 | 0.6649 | 0.062* | |
| C5 | 0.1848 (7) | 0.6352 (7) | 0.6597 (7) | 0.0398 (11) | |
| C6 | 0.2674 (7) | 0.4531 (7) | 0.4151 (7) | 0.0395 (10) | |
| C7 | 0.3045 (9) | 0.4711 (10) | 0.2836 (7) | 0.0499 (13) | |
| H7 | 0.2849 | 0.5656 | 0.2627 | 0.060* | |
| C8 | 0.3715 (12) | 0.3449 (13) | 0.1842 (10) | 0.067 (2) | |
| H8 | 0.4006 | 0.3559 | 0.0977 | 0.080* | |
| C9 | 0.3935 (9) | 0.2066 (10) | 0.2156 (9) | 0.0587 (18) | |
| H9 | 0.4365 | 0.1208 | 0.1498 | 0.070* | |
| C10 | 0.3524 (9) | 0.1931 (9) | 0.3444 (10) | 0.0556 (16) | |
| H10 | 0.3694 | 0.0976 | 0.3648 | 0.067* |
| Hg1 | 0.0618 (2) | 0.0660 (2) | 0.0781 (3) | 0.02555 (14) | 0.02487 (14) | 0.04774 (18) |
| Cl1 | 0.0653 (11) | 0.0710 (11) | 0.0816 (13) | 0.0210 (9) | 0.0091 (9) | 0.0445 (10) |
| Cl2 | 0.0623 (9) | 0.0551 (8) | 0.0628 (9) | 0.0170 (7) | 0.0277 (7) | 0.0314 (7) |
| N1 | 0.051 (3) | 0.058 (3) | 0.050 (3) | 0.019 (2) | 0.014 (2) | 0.027 (2) |
| N2 | 0.059 (3) | 0.043 (2) | 0.045 (3) | 0.016 (2) | 0.015 (2) | 0.024 (2) |
| N3 | 0.043 (2) | 0.041 (2) | 0.056 (3) | 0.006 (2) | 0.013 (2) | 0.023 (2) |
| C1 | 0.072 (5) | 0.078 (5) | 0.051 (4) | 0.020 (4) | 0.017 (3) | 0.033 (4) |
| C2 | 0.071 (5) | 0.084 (6) | 0.047 (4) | 0.019 (4) | 0.012 (3) | 0.017 (4) |
| C3 | 0.066 (4) | 0.061 (4) | 0.052 (4) | 0.013 (4) | 0.015 (3) | 0.009 (3) |
| C4 | 0.053 (3) | 0.045 (3) | 0.052 (3) | 0.007 (3) | 0.008 (3) | 0.014 (3) |
| C5 | 0.035 (2) | 0.043 (3) | 0.043 (3) | 0.006 (2) | 0.007 (2) | 0.019 (2) |
| C6 | 0.037 (2) | 0.040 (3) | 0.042 (3) | 0.005 (2) | 0.008 (2) | 0.017 (2) |
| C7 | 0.052 (3) | 0.060 (4) | 0.046 (3) | 0.017 (3) | 0.015 (2) | 0.026 (3) |
| C8 | 0.064 (4) | 0.088 (6) | 0.057 (4) | 0.013 (4) | 0.025 (3) | 0.032 (4) |
| C9 | 0.045 (3) | 0.054 (4) | 0.063 (4) | 0.008 (3) | 0.018 (3) | 0.003 (3) |
| C10 | 0.049 (3) | 0.047 (3) | 0.072 (4) | 0.011 (3) | 0.020 (3) | 0.021 (3) |
| Cl1—Hg1 | 2.3875 (19) | C5—N1 | 1.323 (8) |
| Cl2—Hg1 | 2.4579 (19) | C5—N2 | 1.381 (8) |
| N1—Hg1 | 2.369 (6) | C6—N3 | 1.341 (8) |
| N2—H2B | 0.95 (14) | C6—N2 | 1.383 (8) |
| N3—Hg1 | 2.290 (6) | C6—C7 | 1.398 (9) |
| C1—N1 | 1.349 (10) | C7—C8 | 1.397 (11) |
| C1—C2 | 1.363 (13) | C7—H7 | 0.9300 |
| C1—H1 | 0.9300 | C8—C9 | 1.352 (14) |
| C2—C3 | 1.390 (14) | C8—H8 | 0.9300 |
| C2—H2 | 0.9300 | C9—C10 | 1.369 (12) |
| C3—C4 | 1.372 (11) | C9—H9 | 0.9300 |
| C3—H3 | 0.9300 | C10—N3 | 1.362 (9) |
| C4—C5 | 1.399 (9) | C10—H10 | 0.9300 |
| C4—H4 | 0.9300 | ||
| N1—Hg1—Cl1 | 112.30 (15) | N2—C6—C7 | 116.6 (5) |
| N1—Hg1—Cl2 | 94.92 (15) | C8—C7—C6 | 119.0 (7) |
| N3—Hg1—Cl1 | 112.21 (15) | C8—C7—H7 | 120.5 |
| N3—Hg1—Cl2 | 123.92 (14) | C6—C7—H7 | 120.5 |
| N3—Hg1—N1 | 82.4 (2) | C9—C8—C7 | 119.0 (7) |
| Cl1—Hg1—Cl2 | 120.14 (7) | C9—C8—H8 | 120.6 |
| N1—C1—C2 | 123.8 (8) | C7—C8—H8 | 120.4 |
| N1—C1—H1 | 118.1 | C8—C9—C10 | 119.9 (7) |
| C2—C1—H1 | 118.1 | C8—C9—H9 | 120.0 |
| C1—C2—C3 | 117.9 (8) | C10—C9—H9 | 120.1 |
| C1—C2—H2 | 121.0 | N3—C10—C9 | 122.5 (7) |
| C3—C2—H2 | 121.0 | N3—C10—H10 | 118.7 |
| C4—C3—C2 | 118.7 (8) | C9—C10—H10 | 118.8 |
| C4—C3—H3 | 120.6 | C5—N1—C1 | 118.4 (7) |
| C2—C3—H3 | 120.7 | C5—N1—Hg1 | 125.5 (4) |
| C3—C4—C5 | 119.9 (7) | C1—N1—Hg1 | 115.7 (5) |
| C3—C4—H4 | 120.1 | C6—N2—C5 | 136.0 (5) |
| C5—C4—H4 | 120.0 | C6—N2—H2B | 109 (8) |
| N1—C5—N2 | 122.3 (6) | C5—N2—H2B | 115 (8) |
| N1—C5—C4 | 121.1 (6) | C6—N3—C10 | 118.2 (6) |
| N2—C5—C4 | 116.6 (6) | C6—N3—Hg1 | 127.3 (4) |
| N3—C6—N2 | 122.1 (6) | C10—N3—Hg1 | 114.4 (5) |
| N3—C6—C7 | 121.3 (6) | ||
| C1—N1—Hg1—N3 | −169.7 (6) | C6—C7—C8—C9 | 2.0 (12) |
| C5—N1—Hg1—N3 | 17.3 (5) | C7—C8—C9—C10 | −0.9 (13) |
| C1—N1—Hg1—Cl1 | −58.7 (6) | C8—C9—C10—N3 | 0.6 (12) |
| C1—N1—Hg1—Cl2 | 66.7 (6) | N2—C5—N1—C1 | 179.1 (7) |
| C5—N1—Hg1—Cl1 | 128.2 (5) | C4—C5—N1—C1 | −2.6 (10) |
| C5—N1—Hg1—Cl2 | −106.3 (5) | N2—C5—N1—Hg1 | −8.1 (9) |
| C6—N3—Hg1—N1 | −15.5 (5) | C4—C5—N1—Hg1 | 170.3 (5) |
| C10—N3—Hg1—N1 | 168.0 (5) | C2—C1—N1—C5 | 1.9 (13) |
| C6—N3—Hg1—Cl1 | −126.5 (5) | C2—C1—N1—Hg1 | −171.6 (7) |
| C10—N3—Hg1—Cl1 | 57.0 (5) | N3—C6—N2—C5 | 17.7 (11) |
| C6—N3—Hg1—Cl2 | 75.3 (5) | C7—C6—N2—C5 | −164.1 (7) |
| C10—N3—Hg1—Cl2 | −101.2 (5) | N1—C5—N2—C6 | −15.3 (11) |
| N1—C1—C2—C3 | −1.4 (15) | C4—C5—N2—C6 | 166.3 (7) |
| C1—C2—C3—C4 | 1.5 (14) | N2—C6—N3—C10 | −179.2 (6) |
| C2—C3—C4—C5 | −2.3 (12) | C7—C6—N3—C10 | 2.7 (9) |
| C3—C4—C5—N1 | 2.8 (10) | N2—C6—N3—Hg1 | 4.5 (8) |
| C3—C4—C5—N2 | −178.7 (7) | C7—C6—N3—Hg1 | −173.7 (5) |
| N3—C6—C7—C8 | −3.0 (10) | C9—C10—N3—C6 | −1.5 (10) |
| N2—C6—C7—C8 | 178.7 (7) | C9—C10—N3—Hg1 | 175.3 (6) |
| H··· | ||||
| N2—H2B···Cl2i | 0.95 (16) | 2.41 (16) | 3.345 (6) | 169 (13) |
| Cl1—Hg1 | 2.3875 (19) |
| Cl2—Hg1 | 2.4579 (19) |
| N1—Hg1 | 2.369 (6) |
| N3—Hg1 | 2.290 (6) |
| N1—Hg1—Cl1 | 112.30 (15) |
| N1—Hg1—Cl2 | 94.92 (15) |
| N3—Hg1—Cl1 | 112.21 (15) |
| N3—Hg1—Cl2 | 123.92 (14) |
| N3—Hg1—N1 | 82.4 (2) |
| Cl1—Hg1—Cl2 | 120.14 (7) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2 | 0.95 (16) | 2.41 (16) | 3.345 (6) | 169 (13) |
Symmetry code: (i) .