| Literature DB >> 21582861 |
Zeinab Khoshtarkib, Amin Ebadi, Roya Ahmadi, Robabeh Alizadeh.
Abstract
The asymmetric unit of the title compound, C(12)H(12)N(2), contains two half-mol-ecules related by an inversion center, the planes of their pyridine rings being oriented at a dihedral angle of 69.62 (4)°. In the crystal structure, a π-π contact between the pyridine rings [centroid-centroid distance = 3.895 (3) Å] may stabilize the structure. A weak C-H⋯π inter-action is also found.Entities:
Year: 2009 PMID: 21582861 PMCID: PMC2969272 DOI: 10.1107/S1600536809019151
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C12H12N2 | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 1133 reflections | |
| θ = 1.8–29.3° | |
| µ = 0.07 mm−1 | |
| α = 96.04 (5)° | |
| β = 91.16 (4)° | Prism, colorless |
| γ = 105.03 (5)° | 0.50 × 0.41 × 0.29 mm |
| Bruker SMART CCD area-detector diffractometer | 2067 reflections with |
| Radiation source: fine-focus sealed tube | |
| graphite | θmax = 29.3°, θmin = 1.8° |
| φ and ω scans | |
| 6191 measured reflections | |
| 2739 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2739 reflections | (Δ/σ)max = 0.002 |
| 129 parameters | Δρmax = 0.27 e Å−3 |
| 0 restraints | Δρmin = −0.24 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| N1 | 0.4778 (2) | 0.76393 (19) | 0.53822 (13) | 0.0604 (4) | |
| N2 | 0.0741 (2) | 0.77876 (19) | 0.99037 (14) | 0.0656 (4) | |
| C1 | 0.4223 (2) | 0.92544 (19) | 0.52837 (12) | 0.0486 (3) | |
| C2 | 0.2280 (2) | 0.9529 (2) | 0.56860 (14) | 0.0579 (4) | |
| H2 | 0.1916 | 1.0661 | 0.5601 | 0.069* | |
| C3 | 0.0896 (3) | 0.8105 (3) | 0.62124 (16) | 0.0655 (4) | |
| H3 | −0.0407 | 0.8276 | 0.6480 | 0.079* | |
| C4 | 0.1445 (3) | 0.6443 (2) | 0.63387 (13) | 0.0594 (4) | |
| C5 | 0.0011 (4) | 0.4859 (3) | 0.69263 (18) | 0.0797 (6) | |
| H5C | 0.0475 | 0.3716 | 0.6761 | 0.096* | |
| H5B | −0.1459 | 0.4638 | 0.6637 | 0.096* | |
| H5A | 0.0105 | 0.5218 | 0.7755 | 0.096* | |
| C6 | 0.3403 (3) | 0.6293 (2) | 0.58998 (16) | 0.0641 (4) | |
| H6 | 0.3793 | 0.5168 | 0.5971 | 0.077* | |
| C7 | 0.0828 (2) | 0.96057 (19) | 1.02576 (12) | 0.0513 (4) | |
| C8 | 0.2406 (3) | 1.0695 (2) | 1.10747 (14) | 0.0632 (4) | |
| H8 | 0.2442 | 1.1958 | 1.1315 | 0.076* | |
| C9 | 0.3905 (3) | 0.9892 (3) | 1.15227 (15) | 0.0679 (5) | |
| H9 | 0.4973 | 1.0614 | 1.2066 | 0.082* | |
| C10 | 0.3838 (3) | 0.8018 (2) | 1.11714 (14) | 0.0600 (4) | |
| C11 | 0.5426 (3) | 0.7065 (3) | 1.1636 (2) | 0.0793 (5) | |
| H11C | 0.5070 | 0.5755 | 1.1305 | 0.095* | |
| H11B | 0.5374 | 0.7130 | 1.2470 | 0.095* | |
| H11A | 0.6856 | 0.7699 | 1.1431 | 0.095* | |
| C12 | 0.2214 (3) | 0.7049 (2) | 1.03580 (18) | 0.0686 (5) | |
| H12 | 0.2146 | 0.5782 | 1.0109 | 0.082* |
| N1 | 0.0614 (8) | 0.0537 (7) | 0.0719 (8) | 0.0235 (6) | 0.0113 (6) | 0.0111 (6) |
| N2 | 0.0615 (8) | 0.0483 (7) | 0.0819 (9) | 0.0103 (6) | −0.0066 (7) | −0.0034 (6) |
| C1 | 0.0470 (7) | 0.0513 (7) | 0.0491 (7) | 0.0170 (6) | −0.0020 (5) | 0.0031 (5) |
| C2 | 0.0500 (8) | 0.0626 (9) | 0.0669 (9) | 0.0231 (6) | 0.0037 (6) | 0.0129 (7) |
| C3 | 0.0508 (8) | 0.0790 (11) | 0.0696 (9) | 0.0200 (8) | 0.0091 (7) | 0.0131 (8) |
| C4 | 0.0607 (9) | 0.0615 (9) | 0.0513 (7) | 0.0076 (7) | 0.0001 (6) | 0.0067 (6) |
| C5 | 0.0809 (13) | 0.0784 (12) | 0.0723 (11) | 0.0034 (10) | 0.0095 (9) | 0.0176 (9) |
| C6 | 0.0734 (10) | 0.0539 (8) | 0.0690 (9) | 0.0212 (7) | 0.0104 (8) | 0.0125 (7) |
| C7 | 0.0527 (7) | 0.0454 (7) | 0.0523 (7) | 0.0062 (6) | 0.0075 (6) | 0.0052 (5) |
| C8 | 0.0722 (10) | 0.0521 (8) | 0.0608 (8) | 0.0129 (7) | −0.0068 (7) | −0.0031 (6) |
| C9 | 0.0727 (10) | 0.0664 (10) | 0.0595 (9) | 0.0131 (8) | −0.0108 (7) | 0.0003 (7) |
| C10 | 0.0567 (8) | 0.0625 (9) | 0.0620 (8) | 0.0137 (7) | 0.0086 (7) | 0.0158 (7) |
| C11 | 0.0705 (11) | 0.0809 (13) | 0.0911 (13) | 0.0247 (10) | −0.0004 (10) | 0.0194 (10) |
| C12 | 0.0640 (10) | 0.0500 (8) | 0.0896 (12) | 0.0137 (7) | −0.0015 (8) | 0.0017 (8) |
| C1—N1 | 1.334 (2) | C7—N2 | 1.335 (2) |
| C1—C2 | 1.393 (2) | C7—C8 | 1.389 (2) |
| C1—C1i | 1.491 (3) | C7—C7ii | 1.475 (3) |
| C2—C3 | 1.384 (3) | C8—C9 | 1.368 (3) |
| C2—H2 | 0.9300 | C8—H8 | 0.9300 |
| C3—C4 | 1.371 (3) | C9—C10 | 1.377 (3) |
| C3—H3 | 0.9300 | C9—H9 | 0.9300 |
| C4—C6 | 1.389 (3) | C10—C12 | 1.380 (3) |
| C4—C5 | 1.511 (3) | C10—C11 | 1.494 (3) |
| C5—H5C | 0.9600 | C11—H11C | 0.9600 |
| C5—H5B | 0.9600 | C11—H11B | 0.9600 |
| C5—H5A | 0.9600 | C11—H11A | 0.9600 |
| C6—N1 | 1.340 (2) | C12—N2 | 1.327 (2) |
| C6—H6 | 0.9300 | C12—H12 | 0.9300 |
| N1—C1—C2 | 121.57 (15) | N2—C7—C7ii | 116.86 (16) |
| N1—C1—C1i | 116.75 (16) | C8—C7—C7ii | 121.84 (17) |
| C2—C1—C1i | 121.68 (16) | C9—C8—C7 | 119.40 (16) |
| C3—C2—C1 | 119.51 (15) | C9—C8—H8 | 120.3 |
| C3—C2—H2 | 120.2 | C7—C8—H8 | 120.3 |
| C1—C2—H2 | 120.2 | C8—C9—C10 | 120.16 (16) |
| C4—C3—C2 | 119.99 (16) | C8—C9—H9 | 119.9 |
| C4—C3—H3 | 120.0 | C10—C9—H9 | 119.9 |
| C2—C3—H3 | 120.0 | C9—C10—C12 | 116.32 (17) |
| C3—C4—C6 | 116.29 (16) | C9—C10—C11 | 122.45 (18) |
| C3—C4—C5 | 122.09 (17) | C12—C10—C11 | 121.22 (17) |
| C6—C4—C5 | 121.62 (17) | C10—C11—H11C | 109.5 |
| C4—C5—H5C | 109.5 | C10—C11—H11B | 109.5 |
| C4—C5—H5B | 109.5 | H11C—C11—H11B | 109.5 |
| H5C—C5—H5B | 109.5 | C10—C11—H11A | 109.5 |
| C4—C5—H5A | 109.5 | H11C—C11—H11A | 109.5 |
| H5C—C5—H5A | 109.5 | H11B—C11—H11A | 109.5 |
| H5B—C5—H5A | 109.5 | N2—C12—C10 | 124.98 (16) |
| N1—C6—C4 | 125.26 (16) | N2—C12—H12 | 117.5 |
| N1—C6—H6 | 117.4 | C10—C12—H12 | 117.5 |
| C4—C6—H6 | 117.4 | C1—N1—C6 | 117.36 (15) |
| N2—C7—C8 | 121.30 (15) | C12—N2—C7 | 117.84 (15) |
| N1—C1—C2—C3 | 0.7 (2) | C8—C9—C10—C12 | 0.4 (3) |
| C1i—C1—C2—C3 | −179.66 (16) | C8—C9—C10—C11 | −179.67 (17) |
| C1—C2—C3—C4 | 0.3 (3) | C9—C10—C12—N2 | −0.2 (3) |
| C2—C3—C4—C6 | −0.9 (3) | C11—C10—C12—N2 | 179.92 (17) |
| C2—C3—C4—C5 | 178.87 (16) | C2—C1—N1—C6 | −0.9 (2) |
| C3—C4—C6—N1 | 0.7 (3) | C1i—C1—N1—C6 | 179.44 (15) |
| C5—C4—C6—N1 | −179.06 (16) | C4—C6—N1—C1 | 0.2 (3) |
| N2—C7—C8—C9 | 0.2 (3) | C10—C12—N2—C7 | −0.1 (3) |
| C7ii—C7—C8—C9 | −179.88 (17) | C8—C7—N2—C12 | 0.0 (3) |
| C7—C8—C9—C10 | −0.5 (3) | C7ii—C7—N2—C12 | −179.87 (17) |
| H··· | ||||
| C9—H9···Cg1iii | 0.93 | 2.78 | 3.669 (3) | 160 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C9—H9⋯ | 0.93 | 2.78 | 3.669 (3) | 160 |
Symmetry code: (i) . Cg1 is the centroid of the N1,C1–C4,C6 ring.