Literature DB >> 21187421

Tuning the ion selectivity of tetrameric cation channels by changing the number of ion binding sites.

Mehabaw G Derebe1, David B Sauer, Weizhong Zeng, Amer Alam, Ning Shi, Youxing Jiang.   

Abstract

Selective ion conduction across ion channel pores is central to cellular physiology. To understand the underlying principles of ion selectivity in tetrameric cation channels, we engineered a set of cation channel pores based on the nonselective NaK channel and determined their structures to high resolution. These structures showcase an ensemble of selectivity filters with a various number of contiguous ion binding sites ranging from 2 to 4, with each individual site maintaining a geometry and ligand environment virtually identical to that of equivalent sites in K(+) channel selectivity filters. Combined with single channel electrophysiology, we show that only the channel with four ion binding sites is K(+) selective, whereas those with two or three are nonselective and permeate Na(+) and K(+) equally well. These observations strongly suggest that the number of contiguous ion binding sites in a single file is the key determinant of the channel's selectivity properties and the presence of four sites in K(+) channels is essential for highly selective and efficient permeation of K(+) ions.

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Year:  2010        PMID: 21187421      PMCID: PMC3021048          DOI: 10.1073/pnas.1013636108

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  32 in total

1.  The predominant role of coordination number in potassium channel selectivity.

Authors:  Michael Thomas; Dylan Jayatilaka; Ben Corry
Journal:  Biophys J       Date:  2007-06-15       Impact factor: 4.033

2.  Tuning ion coordination architectures to enable selective partitioning.

Authors:  Sameer Varma; Susan B Rempe
Journal:  Biophys J       Date:  2007-05-18       Impact factor: 4.033

3.  Crystal structure of a Kir3.1-prokaryotic Kir channel chimera.

Authors:  Motohiko Nishida; Martine Cadene; Brian T Chait; Roderick MacKinnon
Journal:  EMBO J       Date:  2007-08-16       Impact factor: 11.598

4.  Determinants of K+ vs Na+ selectivity in potassium channels.

Authors:  Todor Dudev; Carmay Lim
Journal:  J Am Chem Soc       Date:  2009-06-17       Impact factor: 15.419

5.  Ion selectivity of the KcsA channel: a perspective from multi-ion free energy landscapes.

Authors:  Bernhard Egwolf; Benoît Roux
Journal:  J Mol Biol       Date:  2010-07-17       Impact factor: 5.469

6.  Structural insight into Ca2+ specificity in tetrameric cation channels.

Authors:  Amer Alam; Ning Shi; Youxing Jiang
Journal:  Proc Natl Acad Sci U S A       Date:  2007-09-18       Impact factor: 11.205

7.  K+/Na+ selectivity in K channels and valinomycin: over-coordination versus cavity-size constraints.

Authors:  Sameer Varma; Dubravko Sabo; Susan B Rempe
Journal:  J Mol Biol       Date:  2007-11-28       Impact factor: 5.469

8.  Atomic structure of a voltage-dependent K+ channel in a lipid membrane-like environment.

Authors:  Stephen B Long; Xiao Tao; Ernest B Campbell; Roderick MacKinnon
Journal:  Nature       Date:  2007-11-15       Impact factor: 49.962

9.  Structural analysis of ion selectivity in the NaK channel.

Authors:  Amer Alam; Youxing Jiang
Journal:  Nat Struct Mol Biol       Date:  2008-12-21       Impact factor: 15.369

10.  High-resolution structure of the open NaK channel.

Authors:  Amer Alam; Youxing Jiang
Journal:  Nat Struct Mol Biol       Date:  2008-12-21       Impact factor: 15.369

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  59 in total

1.  Gating at the selectivity filter of ion channels that conduct Na+ and K+ ions.

Authors:  Simone Furini; Carmen Domene
Journal:  Biophys J       Date:  2011-10-05       Impact factor: 4.033

2.  Role of protein dynamics in ion selectivity and allosteric coupling in the NaK channel.

Authors:  Joshua B Brettmann; Darya Urusova; Marco Tonelli; Jonathan R Silva; Katherine A Henzler-Wildman
Journal:  Proc Natl Acad Sci U S A       Date:  2015-11-30       Impact factor: 11.205

3.  Structures of the Human HCN1 Hyperpolarization-Activated Channel.

Authors:  Chia-Hsueh Lee; Roderick MacKinnon
Journal:  Cell       Date:  2017-01-12       Impact factor: 41.582

Review 4.  Bacterial voltage-gated sodium channels (BacNa(V)s) from the soil, sea, and salt lakes enlighten molecular mechanisms of electrical signaling and pharmacology in the brain and heart.

Authors:  Jian Payandeh; Daniel L Minor
Journal:  J Mol Biol       Date:  2014-08-23       Impact factor: 5.469

5.  Role of methyl-induced polarization in ion binding.

Authors:  Mariana Rossi; Alexandre Tkatchenko; Susan B Rempe; Sameer Varma
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-22       Impact factor: 11.205

Review 6.  K(+) and Na(+) conduction in selective and nonselective ion channels via molecular dynamics simulations.

Authors:  Simone Furini; Carmen Domene
Journal:  Biophys J       Date:  2013-10-15       Impact factor: 4.033

7.  Protein interactions central to stabilizing the K+ channel selectivity filter in a four-sited configuration for selective K+ permeation.

Authors:  David B Sauer; Weizhong Zeng; Srinivasan Raghunathan; Youxing Jiang
Journal:  Proc Natl Acad Sci U S A       Date:  2011-09-20       Impact factor: 11.205

8.  Nonselective conduction in a mutated NaK channel with three cation-binding sites.

Authors:  Simone Furini; Carmen Domene
Journal:  Biophys J       Date:  2012-11-20       Impact factor: 4.033

9.  Contribution of residues in second transmembrane domain of ASIC1a protein to ion selectivity.

Authors:  Marcelo D Carattino; Margaret C Della Vecchia
Journal:  J Biol Chem       Date:  2012-02-27       Impact factor: 5.157

Review 10.  Permeation redux: thermodynamics and kinetics of ion movement through potassium channels.

Authors:  Richard Horn; Benoît Roux; Johan Åqvist
Journal:  Biophys J       Date:  2014-05-06       Impact factor: 4.033

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