Literature DB >> 21169454

Comparison of family 9 cellulases from mesophilic and thermophilic bacteria.

Florence Mingardon1, John D Bagert, Cyprien Maisonnier, Devin L Trudeau, Frances H Arnold.   

Abstract

Cellulases containing a family 9 catalytic domain and a family 3c cellulose binding module (CBM3c) are important components of bacterial cellulolytic systems. We measured the temperature dependence of the activities of three homologs: Clostridium cellulolyticum Cel9G, Thermobifida fusca Cel9A, and C. thermocellum Cel9I. To directly compare their catalytic activities, we constructed six new versions of the enzymes in which the three GH9-CBM3c domains were fused to a dockerin both with and without a T. fusca fibronectin type 3 homology module (Fn3). We studied the activities of these enzymes on crystalline cellulose alone and in complex with a miniscaffoldin containing a cohesin and a CBM3a. The presence of Fn3 had no measurable effect on thermostability or cellulase activity. The GH9-CBM3c domains of Cel9A and Cel9I, however, were more active than the wild type when fused to a dockerin complexed to scaffoldin. The three cellulases in complex have similar activities on crystalline cellulose up to 60°C, but C. thermocellum Cel9I, the most thermostable of the three, remains highly active up to 80°C, where its activity is 1.9 times higher than at 60°C. We also compared the temperature-dependent activities of different versions of Cel9I (wild type or in complex with a miniscaffoldin) and found that the thermostable CBM is necessary for activity on crystalline cellulose at high temperatures. These results illustrate the significant benefits of working with thermostable enzymes at high temperatures, as well as the importance of retaining the stability of all modules involved in cellulose degradation.

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Year:  2010        PMID: 21169454      PMCID: PMC3067227          DOI: 10.1128/AEM.01802-10

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  28 in total

1.  Comparing the thermodynamic stabilities of a related thermophilic and mesophilic enzyme.

Authors:  B M Beadle; W A Baase; D B Wilson; N R Gilkes; B K Shoichet
Journal:  Biochemistry       Date:  1999-02-23       Impact factor: 3.162

Review 2.  Toward an aggregated understanding of enzymatic hydrolysis of cellulose: noncomplexed cellulase systems.

Authors:  Yi-Heng Percival Zhang; Lee R Lynd
Journal:  Biotechnol Bioeng       Date:  2004-12-30       Impact factor: 4.530

3.  Action of designer cellulosomes on homogeneous versus complex substrates: controlled incorporation of three distinct enzymes into a defined trifunctional scaffoldin.

Authors:  Henri-Pierre Fierobe; Florence Mingardon; Adva Mechaly; Anne Bélaïch; Marco T Rincon; Sandrine Pagès; Raphael Lamed; Chantal Tardif; Jean-Pierre Bélaïch; Edward A Bayer
Journal:  J Biol Chem       Date:  2005-02-10       Impact factor: 5.157

Review 4.  Cellulosomes: microbial nanomachines that display plasticity in quaternary structure.

Authors:  Harry J Gilbert
Journal:  Mol Microbiol       Date:  2007-03       Impact factor: 3.501

5.  A submicrodetermination of glucose.

Authors:  J T PARK; M J JOHNSON
Journal:  J Biol Chem       Date:  1949-11       Impact factor: 5.157

6.  Structure and mechanism of endo/exocellulase E4 from Thermomonospora fusca.

Authors:  J Sakon; D Irwin; D B Wilson; P A Karplus
Journal:  Nat Struct Biol       Date:  1997-10

7.  Roles of the catalytic domain and two cellulose binding domains of Thermomonospora fusca E4 in cellulose hydrolysis.

Authors:  D Irwin; D H Shin; S Zhang; B K Barr; J Sakon; P A Karplus; D B Wilson
Journal:  J Bacteriol       Date:  1998-04       Impact factor: 3.490

8.  Incorporation of fungal cellulases in bacterial minicellulosomes yields viable, synergistically acting cellulolytic complexes.

Authors:  Florence Mingardon; Angélique Chanal; Ana M López-Contreras; Cyril Dray; Edward A Bayer; Henri-Pierre Fierobe
Journal:  Appl Environ Microbiol       Date:  2007-04-27       Impact factor: 4.792

9.  Processivity, substrate binding, and mechanism of cellulose hydrolysis by Thermobifida fusca Cel9A.

Authors:  Yongchao Li; Diana C Irwin; David B Wilson
Journal:  Appl Environ Microbiol       Date:  2007-03-16       Impact factor: 4.792

Review 10.  Carbohydrate-binding modules: fine-tuning polysaccharide recognition.

Authors:  Alisdair B Boraston; David N Bolam; Harry J Gilbert; Gideon J Davies
Journal:  Biochem J       Date:  2004-09-15       Impact factor: 3.857

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  12 in total

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Journal:  Folia Microbiol (Praha)       Date:  2019-05-17       Impact factor: 2.099

2.  Polarity Alteration of a Calcium Site Induces a Hydrophobic Interaction Network and Enhances Cel9A Endoglucanase Thermostability.

Authors:  Hsiu-Jung Wang; Yu-Yuan Hsiao; Yu-Pei Chen; Tien-Yang Ma; Ching-Ping Tseng
Journal:  Appl Environ Microbiol       Date:  2016-01-04       Impact factor: 4.792

3.  First thermostable endo-β-1,4-glucanase from newly isolated Xanthomonas sp. EC102.

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Journal:  Protein J       Date:  2014-02       Impact factor: 2.371

4.  Structure, activity, and stability of metagenome-derived glycoside hydrolase family 9 endoglucanase with an N-terminal Ig-like domain.

Authors:  Hiroyuki Okano; Eiko Kanaya; Masashi Ozaki; Clement Angkawidjaja; Shigenori Kanaya
Journal:  Protein Sci       Date:  2015-01-13       Impact factor: 6.725

5.  Aspergillus niger β-glucosidase has a cellulase-like tadpole molecular shape: insights into glycoside hydrolase family 3 (GH3) β-glucosidase structure and function.

Authors:  Marisa A Lima; Mario Oliveira-Neto; Marco Antonio S Kadowaki; Flavio R Rosseto; Erica T Prates; Fabio M Squina; Adriana F P Leme; Munir S Skaf; Igor Polikarpov
Journal:  J Biol Chem       Date:  2013-09-24       Impact factor: 5.157

6.  Significance of relative position of cellulases in designer cellulosomes for optimized cellulolysis.

Authors:  Johanna Stern; Amaranta Kahn; Yael Vazana; Melina Shamshoum; Sarah Moraïs; Raphael Lamed; Edward A Bayer
Journal:  PLoS One       Date:  2015-05-29       Impact factor: 3.240

7.  Endoglucanases: insights into thermostability for biofuel applications.

Authors:  Ragothaman M Yennamalli; Andrew J Rader; Adam J Kenny; Jeffrey D Wolt; Taner Z Sen
Journal:  Biotechnol Biofuels       Date:  2013-09-27       Impact factor: 6.040

8.  Alkene hydrogenation activity of enoate reductases for an environmentally benign biosynthesis of adipic acid.

Authors:  Jeong Chan Joo; Anna N Khusnutdinova; Robert Flick; Taeho Kim; Uwe T Bornscheuer; Alexander F Yakunin; Radhakrishnan Mahadevan
Journal:  Chem Sci       Date:  2016-10-11       Impact factor: 9.825

9.  Plant carbohydrate binding module enhances activity of hybrid microbial cellulase enzyme.

Authors:  Caitlin S Byrt; Ricky Cahyanegara; Christopher P L Grof
Journal:  Front Plant Sci       Date:  2012-11-19       Impact factor: 5.753

10.  Reassembly and co-crystallization of a family 9 processive endoglucanase from its component parts: structural and functional significance of the intermodular linker.

Authors:  Svetlana Petkun; Inna Rozman Grinberg; Raphael Lamed; Sadanari Jindou; Tal Burstein; Oren Yaniv; Yuval Shoham; Linda J W Shimon; Edward A Bayer; Felix Frolow
Journal:  PeerJ       Date:  2015-09-15       Impact factor: 2.984

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