Literature DB >> 9334746

Structure and mechanism of endo/exocellulase E4 from Thermomonospora fusca.

J Sakon1, D Irwin, D B Wilson, P A Karplus.   

Abstract

Cellulase E4 from Thermomonospora fusca is unusual in that it has characteristics of both exo- and endo-cellulases. Here we report the crystal structure of a 68K M(r) fragment of E4 (E4-68) at 1.9 A resolution. E4-68 contains both a family 9 catalytic domain, exhibiting an (alpha/alpha)6 barrel fold, and a family III cellulose binding domain, having an antiparallel beta-sandwich fold. While neither of these folds is novel, E4-68 provides the first cellulase structure having interacting catalytic and cellulose binding domains. The complexes of E4-68 with cellopentaose, cellotriose and cellobiose reveal conformational changes associated with ligand binding and allow us to propose a catalytic mechanism for family 9 enzymes. We also provide evidence that E4 has two novel characteristics: first it combines exo- and endo-activities and second, when it functions as an exo-cellulase, it cleaves off cellotetraose units.

Entities:  

Mesh:

Substances:

Year:  1997        PMID: 9334746     DOI: 10.1038/nsb1097-810

Source DB:  PubMed          Journal:  Nat Struct Biol        ISSN: 1072-8368


  87 in total

1.  The thermostabilizing domain, XynA, of Caldibacillus cellulovorans xylanase is a xylan binding domain.

Authors:  A Sunna; M D Gibbs; P L Bergquist
Journal:  Biochem J       Date:  2000-03-15       Impact factor: 3.857

2.  Structure of a two-domain chitotriosidase from Serratia marcescens at 1.9-A resolution.

Authors:  D M van Aalten; B Synstad; M B Brurberg; E Hough; B W Riise; V G Eijsink; R K Wierenga
Journal:  Proc Natl Acad Sci U S A       Date:  2000-05-23       Impact factor: 11.205

3.  Structural insights into the catalytic mechanism of a family 18 exo-chitinase.

Authors:  D M van Aalten; D Komander; B Synstad; S Gåseidnes; M G Peter; V G Eijsink
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-31       Impact factor: 11.205

Review 4.  A structural basis for processivity.

Authors:  W A Breyer; B W Matthews
Journal:  Protein Sci       Date:  2001-09       Impact factor: 6.725

5.  An intron-containing glycoside hydrolase family 9 cellulase gene encodes the dominant 90 kDa component of the cellulosome of the anaerobic fungus Piromyces sp. strain E2.

Authors:  Peter J M Steenbakkers; Wimal Ubhayasekera; Harry J A M Goossen; Erik M H M van Lierop; Chris van der Drift; Godfried D Vogels; Sherry L Mowbray; Huub J M Op den Camp
Journal:  Biochem J       Date:  2002-07-01       Impact factor: 3.857

6.  Characterization of a cellulase containing a family 30 carbohydrate-binding module (CBM) derived from Clostridium thermocellum CelJ: importance of the CBM to cellulose hydrolysis.

Authors:  Takamitsu Arai; Rie Araki; Akiyoshi Tanaka; Shuichi Karita; Tetsuya Kimura; Kazuo Sakka; Kunio Ohmiya
Journal:  J Bacteriol       Date:  2003-01       Impact factor: 3.490

7.  CelI, a noncellulosomal family 9 enzyme from Clostridium thermocellum, is a processive endoglucanase that degrades crystalline cellulose.

Authors:  Rachel Gilad; Larisa Rabinovich; Sima Yaron; Edward A Bayer; Raphael Lamed; Harry J Gilbert; Yuval Shoham
Journal:  J Bacteriol       Date:  2003-01       Impact factor: 3.490

8.  Characteristics of bifunctional acidic endoglucanase (Cel5B) from Gloeophyllum trabeum.

Authors:  Ho Myeong Kim; Yoon Gyo Lee; Darshan H Patel; Kwang Ho Lee; Dae-Seok Lee; Hyeun-Jong Bae
Journal:  J Ind Microbiol Biotechnol       Date:  2012-03-07       Impact factor: 3.346

Review 9.  GPR39: a Zn(2+)-activated G protein-coupled receptor that regulates pancreatic, gastrointestinal and neuronal functions.

Authors:  Petra Popovics; Alan J Stewart
Journal:  Cell Mol Life Sci       Date:  2010-09-02       Impact factor: 9.261

10.  Structure of the dodecamer of the aminopeptidase APDkam598 from the archaeon Desulfurococcus kamchatkensis.

Authors:  T E Petrova; E S Slutskaya; K M Boyko; O S Sokolova; T V Rakitina; D A Korzhenevskiy; M A Gorbacheva; E Y Bezsudnova; V O Popov
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2015-02-19       Impact factor: 1.056

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.