Literature DB >> 30022302

Environmental proteomic studies: closer step to understand bacterial biofilms.

Anupama Rani1, Subramanian Babu2.   

Abstract

Advancement in proteome analytical techniques and the development of protein databases have been helping to understand the physiology and subtle molecular mechanisms behind biofilm formation in bacteria. This review is to highlight how the evolving proteomic approaches have revealed fundamental molecular processes underlying the formation and regulation of bacterial biofilms. Based on the survey of research reports available on differential expression of proteins in biofilms of bacterial from wide range of environments, four important cellular processes viz. metabolism, motility, transport and stress response that contribute to formation of bacterial biofilms are discussed. This review might answer how proteins related to these cellular processes contribute significantly in stabilizing biofilms of different bacteria in diverse environmental conditions.

Keywords:  Bacteria; Biofilm; Proteomics; Techniques; Tools

Mesh:

Substances:

Year:  2018        PMID: 30022302     DOI: 10.1007/s11274-018-2504-x

Source DB:  PubMed          Journal:  World J Microbiol Biotechnol        ISSN: 0959-3993            Impact factor:   3.312


  75 in total

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Authors:  Dhirendra Kumar; Anupam Kumar Mondal; Rintu Kutum; Debasis Dash
Journal:  Proteomics       Date:  2015-11-23       Impact factor: 3.984

2.  SspA is required for acid resistance in stationary phase by downregulation of H-NS in Escherichia coli.

Authors:  Anne-Marie Hansen; Yu Qiu; Norman Yeh; Frederick R Blattner; Tim Durfee; Ding Jun Jin
Journal:  Mol Microbiol       Date:  2005-05       Impact factor: 3.501

3.  Identification of catabolite repression as a physiological regulator of biofilm formation by Bacillus subtilis by use of DNA microarrays.

Authors:  Nicola R Stanley; Robert A Britton; Alan D Grossman; Beth A Lazazzera
Journal:  J Bacteriol       Date:  2003-03       Impact factor: 3.490

4.  Identification of proteins associated with the Pseudomonas aeruginosa biofilm extracellular matrix.

Authors:  Masanori Toyofuku; Bernd Roschitzki; Katharina Riedel; Leo Eberl
Journal:  J Proteome Res       Date:  2012-09-26       Impact factor: 4.466

5.  Genetic evidence that the Vibrio cholerae monolayer is a distinct stage in biofilm development.

Authors:  Sudha Moorthy; Paula I Watnick
Journal:  Mol Microbiol       Date:  2004-04       Impact factor: 3.501

6.  Cinnamaldehyde induces changes in the protein profile of Salmonella Typhimurium biofilm.

Authors:  Alex Fiori Silva; Adriele Rodrigues Dos Santos; Daliah Alves Coelho Trevisan; Alessandra Braga Ribeiro; Paula Aline Zanetti Campanerut-Sá; Caroline Kukolj; Emanuel Maltempi de Souza; Rosilene Fressatti Cardoso; Terezinha Inez Estivalet Svidzinski; Benicio Alves de Abreu Filho; Miguel Machinski Junior; Jane Martha Graton Mikcha
Journal:  Res Microbiol       Date:  2017-09-30       Impact factor: 3.992

7.  Analysis of the biofilm proteome of Xylella fastidiosa.

Authors:  Mariana S Silva; Alessandra A De Souza; Marco A Takita; Carlos A Labate; Marcos A Machado
Journal:  Proteome Sci       Date:  2011-09-22       Impact factor: 2.480

8.  Proteomic and metabolomic profiles demonstrate variation among free-living and symbiotic vibrio fischeri biofilms.

Authors:  Alba Chavez-Dozal; Clayton Gorman; Michele K Nishiguchi
Journal:  BMC Microbiol       Date:  2015-10-23       Impact factor: 3.605

Review 9.  Environmental Microbial Community Proteomics: Status, Challenges and Perspectives.

Authors:  Da-Zhi Wang; Ling-Fen Kong; Yuan-Yuan Li; Zhang-Xian Xie
Journal:  Int J Mol Sci       Date:  2016-08-05       Impact factor: 5.923

10.  The proteins of Fusobacterium spp. involved in hydrogen sulfide production from L-cysteine.

Authors:  Amina Basic; Madeleine Blomqvist; Gunnar Dahlén; Gunnel Svensäter
Journal:  BMC Microbiol       Date:  2017-03-14       Impact factor: 3.605

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  4 in total

1.  Comparative Proteomic Analyses Between Biofilm-Forming and Non-biofilm-Forming Strains of Corynebacterium pseudotuberculosis Isolated From Goats.

Authors:  Maria Conceição Aquino de Sá; Wanderson Marques da Silva; Carla Catarine Santos Rodrigues; Cristiana Perdigão Rezende; Silvana Beutinger Marchioro; José Tadeu Raynal Rocha Filho; Thiago de Jesus Sousa; Helinando Pequeno de Oliveira; Mateus Matiuzzi da Costa; Henrique César Pereira Figueiredo; Ricardo Dias Portela; Thiago Luiz de Paula Castro; Vasco Azevedo; Nubia Seyffert; Roberto Meyer
Journal:  Front Vet Sci       Date:  2021-02-16

2.  Proteomic Studies of the Biofilm Matrix including Outer Membrane Vesicles of Burkholderia multivorans C1576, a Strain of Clinical Importance for Cystic Fibrosis.

Authors:  Lucrecia C Terán; Marco Distefano; Barbara Bellich; Sara Petrosino; Paolo Bertoncin; Paola Cescutti; Daniele Sblattero
Journal:  Microorganisms       Date:  2020-11-19

3.  Active Microbiome Structure and Functional Analyses of Freshwater Benthic Biofilm Samples Influenced by RNA Extraction Methods.

Authors:  Yuan Yao; Subramanya Rao; Olivier Habimana
Journal:  Front Microbiol       Date:  2021-04-16       Impact factor: 5.640

4.  A journey through the Corynebacterium pseudotuberculosis proteome promotes insights into its functional genome.

Authors:  Wanderson Marques da Silva; Nubia Seyffert; Artur Silva; Vasco Azevedo
Journal:  PeerJ       Date:  2021-12-23       Impact factor: 2.984

  4 in total

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