Literature DB >> 21115705

Global phylogeography of chitinase genes in aquatic metagenomes.

Sara Beier1, Christopher M Jones, Vani Mohit, Sara Hallin, Stefan Bertilsson.   

Abstract

Phylogeny-based analysis of chitinase and 16S rRNA genes from metagenomic data suggests that salinity is a major driver for the distribution of both chitinolytic and total bacterial communities in aquatic systems. Additionally, more acidic chitinase proteins were observed with increasing salinity. Congruent habitat separation was further observed for both genes according to latitude and proximity to the coastline. However, comparison of chitinase and 16S rRNA genes extracted from different geographic locations showed little congruence in distribution. There was no indication that dispersal limited the global distribution of either gene.

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Year:  2010        PMID: 21115705      PMCID: PMC3028708          DOI: 10.1128/AEM.01481-10

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  32 in total

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  11 in total

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