Literature DB >> 21073879

Distal-to-proximal NO conversion in hemoproteins: the role of the proximal pocket.

Michael A Hough1, Svetlana V Antonyuk, Sonia Barbieri, Neil Rustage, Alison L McKay, Amy E Servid, Robert R Eady, Colin R Andrew, S Samar Hasnain.   

Abstract

Hemoproteins play central roles in the formation and utilization of nitric oxide (NO) in cellular signaling, as well as in protection against nitrosative stress. Key to heme-nitrosyl function and reactivity is the Fe coordination number (5 or 6). For (five-coordinate) 5c-NO complexes, the potential for NO to bind on either heme face exists, as in the microbial cytochrome c' from Alcaligenes xylosoxidans (AxCYTcp), which forms a stable proximal 5c-NO complex via a distal six-coordinate NO intermediate and a putative dinitrosyl species. Strong parallels between the NO-binding kinetics of AxCYTcp, the eukaryotic NO sensor soluble guanylate cyclase, and the ferrocytochrome c/cardiolipin complex have led to the suggestion that a distal-to-proximal NO switch could contribute to the selective ligand responses in gas-sensing hemoproteins. The proximal NO-binding site in AxCYTcp is close to a conserved basic (Arg124) residue that is postulated to modulate NO reactivity. We have replaced Arg124 by five different amino acids and have determined high-resolution (1.07-1.40 Å) crystallographic structures with and without NO. These, together with kinetic and resonance Raman data, provide new insights into the mechanism of distal-to-proximal heme-NO conversion, including the determinants of Fe-His bond scission. The Arg124Ala variant allowed us to determine the structure of an analog of the previously unobserved key 5c-NO distal intermediate species. The very high resolution structures combined with the extensive spectroscopic and kinetic data have allowed us to provide a fresh insight into heme reactivity towards NO, a reaction that is of wide importance in biology. Copyright Â
© 2010 Elsevier Ltd. All rights reserved.

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Year:  2010        PMID: 21073879     DOI: 10.1016/j.jmb.2010.10.035

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  11 in total

1.  Mechanism of binding of NO to soluble guanylyl cyclase: implication for the second NO binding to the heme proximal site.

Authors:  Emil Martin; Vladimir Berka; Iraida Sharina; Ah-Lim Tsai
Journal:  Biochemistry       Date:  2012-03-19       Impact factor: 3.162

2.  A "sliding scale rule" for selectivity among NO, CO, and O₂ by heme protein sensors.

Authors:  Ah-Lim Tsai; Vladimir Berka; Emil Martin; John S Olson
Journal:  Biochemistry       Date:  2011-12-13       Impact factor: 3.162

3.  Hydrogen bonding of the dissociated histidine ligand is not required for formation of a proximal NO adduct in cytochrome c'.

Authors:  Dlzar D Ghafoor; Demet Kekilli; Gaylany H Abdullah; Florian S N Dworkowski; Hamid G Hassan; Michael T Wilson; Richard W Strange; Michael A Hough
Journal:  J Biol Inorg Chem       Date:  2015-06-23       Impact factor: 3.358

4.  Conformational control of the binding of diatomic gases to cytochrome c'.

Authors:  Andreea Manole; Demet Kekilli; Dimitri A Svistunenko; Michael T Wilson; Paul S Dobbin; Michael A Hough
Journal:  J Biol Inorg Chem       Date:  2015-03-20       Impact factor: 3.358

5.  The roles of C-terminal residues on the thermal stability and local heme environment of cytochrome c' from the thermophilic purple sulfur bacterium Thermochromatium tepidum.

Authors:  Yukihiro Kimura; Sachiko Kasuga; Masashi Unno; Takashi Furusawa; Shinsuke Osoegawa; Yuko Sasaki; Takashi Ohno; Zheng-Yu Wang-Otomo
Journal:  Photosynth Res       Date:  2014-12-18       Impact factor: 3.573

Review 6.  How do heme-protein sensors exclude oxygen? Lessons learned from cytochrome c', Nostoc puntiforme heme nitric oxide/oxygen-binding domain, and soluble guanylyl cyclase.

Authors:  Ah-Lim Tsai; Emil Martin; Vladimir Berka; John S Olson
Journal:  Antioxid Redox Signal       Date:  2012-04-10       Impact factor: 8.401

Review 7.  A new paradigm for gaseous ligand selectivity of hemoproteins highlighted by soluble guanylate cyclase.

Authors:  Gang Wu; Emil Martin; Vladimir Berka; Wen Liu; Elsa D Garcin; Ah-Lim Tsai
Journal:  J Inorg Biochem       Date:  2020-10-16       Impact factor: 4.155

8.  Crystal structure of thermally stable homodimeric cytochrome c'-β from Thermus thermophilus.

Authors:  Taisuke Yoshimi; Sotaro Fujii; Hiroya Oki; Takeshi Igawa; Hannah R Adams; Kengo Ueda; Kazuki Kawahara; Tadayasu Ohkubo; Michael A Hough; Yoshihiro Sambongi
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2022-05-27       Impact factor: 1.072

Review 9.  Sub-atomic resolution X-ray crystallography and neutron crystallography: promise, challenges and potential.

Authors:  Matthew P Blakeley; Samar S Hasnain; Svetlana V Antonyuk
Journal:  IUCrJ       Date:  2015-06-30       Impact factor: 4.769

10.  Modulation of ligand-heme reactivity by binding pocket residues demonstrated in cytochrome c' over the femtosecond-second temporal range.

Authors:  Henry J Russell; Samantha J O Hardman; Derren J Heyes; Michael A Hough; Gregory M Greetham; Michael Towrie; Sam Hay; Nigel S Scrutton
Journal:  FEBS J       Date:  2013-10-11       Impact factor: 5.542

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