Literature DB >> 33099233

A new paradigm for gaseous ligand selectivity of hemoproteins highlighted by soluble guanylate cyclase.

Gang Wu1, Emil Martin2, Vladimir Berka3, Wen Liu4, Elsa D Garcin5, Ah-Lim Tsai6.   

Abstract

Nitric oxide (NO), carbon monoxide (CO), and oxygen (O2) are important physiological messengers whose concentrations vary in a remarkable range, [NO] typically from nM to several μM while [O2] reaching to hundreds of μM. One of the machineries evolved in living organisms for gas sensing is sensor hemoproteins whose conformational change upon gas binding triggers downstream response cascades. The recently proposed "sliding scale rule" hypothesis provides a general interpretation for gaseous ligand selectivity of hemoproteins, identifying five factors that govern gaseous ligand selectivity. Hemoproteins have intrinsic selectivity for the three gases due to a neutral proximal histidine ligand while proximal strain of heme and distal steric hindrance indiscriminately adjust the affinity of these three gases for heme. On the other hand, multiple-step NO binding and distal hydrogen bond donor(s) specifically enhance affinity for NO and O2, respectively. The "sliding scale rule" hypothesis provides clear interpretation for dramatic selectivity for NO over O2 in soluble guanylate cyclase (sGC) which is an important example of sensor hemoproteins and plays vital roles in a wide range of physiological functions. The "sliding scale rule" hypothesis has so far been validated by all experimental data and it may guide future designs for heme-based gas sensors.
Copyright © 2020 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Gas sensor/binding hemoproteins; Gaseous ligand selectivity; Sliding scale rule; Soluble guanylate cyclase

Mesh:

Substances:

Year:  2020        PMID: 33099233      PMCID: PMC7719063          DOI: 10.1016/j.jinorgbio.2020.111267

Source DB:  PubMed          Journal:  J Inorg Biochem        ISSN: 0162-0134            Impact factor:   4.155


  80 in total

1.  Oxidation and loss of heme in soluble guanylyl cyclase from Manduca sexta.

Authors:  Bradley G Fritz; Xiaohui Hu; Jacqueline L Brailey; Robert E Berry; F Ann Walker; William R Montfort
Journal:  Biochemistry       Date:  2011-06-10       Impact factor: 3.162

2.  Dynamic ligand exchange in soluble guanylyl cyclase (sGC): implications for sGC regulation and desensitization.

Authors:  Ah-Lim Tsai; Vladimir Berka; Iraida Sharina; Emil Martin
Journal:  J Biol Chem       Date:  2011-10-18       Impact factor: 5.157

3.  Motion of proximal histidine and structural allosteric transition in soluble guanylate cyclase.

Authors:  Byung-Kuk Yoo; Isabelle Lamarre; Jean-Louis Martin; Fabrice Rappaport; Michel Negrerie
Journal:  Proc Natl Acad Sci U S A       Date:  2015-03-23       Impact factor: 11.205

Review 4.  Nitric oxide-sensing H-NOX proteins govern bacterial communal behavior.

Authors:  Lars Plate; Michael A Marletta
Journal:  Trends Biochem Sci       Date:  2013-10-07       Impact factor: 13.807

5.  Nitric oxide: an endogenous modulator of leukocyte adhesion.

Authors:  P Kubes; M Suzuki; D N Granger
Journal:  Proc Natl Acad Sci U S A       Date:  1991-06-01       Impact factor: 11.205

6.  A molecular basis for NO selectivity in soluble guanylate cyclase.

Authors:  Elizabeth M Boon; Shirley H Huang; Michael A Marletta
Journal:  Nat Chem Biol       Date:  2005-05-24       Impact factor: 15.040

7.  Characterization of recombinant soybean leghemoglobin a and apolar distal histidine mutants.

Authors:  M S Hargrove; J K Barry; E A Brucker; M B Berry; G N Phillips; J S Olson; R Arredondo-Peter; J M Dean; R V Klucas; G Sarath
Journal:  J Mol Biol       Date:  1997-03-14       Impact factor: 5.469

8.  Tunnels modulate ligand flux in a heme nitric oxide/oxygen binding (H-NOX) domain.

Authors:  Michael B Winter; Mark A Herzik; John Kuriyan; Michael A Marletta
Journal:  Proc Natl Acad Sci U S A       Date:  2011-10-12       Impact factor: 11.205

9.  The leghemoglobin proximal heme pocket directs oxygen dissociation and stabilizes bound heme.

Authors:  Suman Kundu; Barry Snyder; Kaustuv Das; Pramit Chowdhury; Jaehun Park; Jacob W Petrich; Mark S Hargrove
Journal:  Proteins       Date:  2002-02-15

10.  Allosteric activation of the nitric oxide receptor soluble guanylate cyclase mapped by cryo-electron microscopy.

Authors:  Benjamin G Horst; Adam L Yokom; Daniel J Rosenberg; Kyle L Morris; Michal Hammel; James H Hurley; Michael A Marletta
Journal:  Elife       Date:  2019-09-30       Impact factor: 8.140

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  3 in total

1.  The Mechanism of Biochemical NO-Sensing: Insights from Computational Chemistry.

Authors:  Ahmed M Rozza; Marcell Papp; Neil R McFarlane; Jeremy N Harvey; Julianna Oláh
Journal:  Chemistry       Date:  2022-07-11       Impact factor: 5.020

2.  Endogenous Hemoprotein-Dependent Signaling Pathways of Nitric Oxide and Nitrite.

Authors:  Matthew R Dent; Anthony W DeMartino; Jesús Tejero; Mark T Gladwin
Journal:  Inorg Chem       Date:  2021-07-27       Impact factor: 5.436

Review 3.  Heme Oxygenase-1: An Anti-Inflammatory Effector in Cardiovascular, Lung, and Related Metabolic Disorders.

Authors:  Stefan W Ryter
Journal:  Antioxidants (Basel)       Date:  2022-03-15
  3 in total

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