Literature DB >> 21050022

A computational investigation of the nitrogen-boron interaction in o-(N,N-dialkylaminomethyl)arylboronate systems.

Joseph D Larkin1, John S Fossey, Tony D James, Bernard R Brooks, Charles W Bock.   

Abstract

o-(N,N-Dialkylaminomethyl)arylboronate systems are an important class of compounds in diol-sensor development. We report results from a computational investigation of fourteen o-(N,N-dialkylaminomethyl)arylboronates using second-order Møller-Plesset (MP2) perturbation theory. Geometry optimizations were performed at the MP2/cc-pVDZ level and followed by single-point calculations at the MP2/aug-cc-pVDZ(cc-pVTZ) levels. These results are compared to those from density functional theory (DFT) at the PBE1PBE(PBE1PBE-D)/6-311++G(d,p)(aug-cc-pVDZ) levels, as well as to experiment. Results from continuum PCM and CPCM solvation models were employed to assess the effects of a bulk aqueous environment. Although the behavior of o-(N,N-dialkylaminomethyl) free acid and ester proved to be complicated, we were able to extract some important trends from our calculations: (1) for the free acids the intramolecular hydrogen-bonded B-O-H···N seven-membered ring conformers 12 and 16 are found to be slightly lower in energy than the dative-bonded N→B five-membered ring conformers 10 and 14 while conformers 13 and 17, with no direct boron-nitrogen interaction, are significantly higher in energy than 12 and 16; (2) for the esters where no intramolecular B-O-H···N bonded form is possible, the N→B conformers 18 and 21 are significantly lower in energy than the no-interaction forms 20 and 23; (3) H(2)O insertion reactions into the N→B structures 10, 14, 18, and 21 leading to the seven-membered intermolecular hydrogen-bonded B···OH(2)···N ring structures 11, 15, 19, and 22 are all energetically favorable.

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Year:  2010        PMID: 21050022      PMCID: PMC4219545          DOI: 10.1021/jp1087674

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  23 in total

1.  Generalized Gradient Approximation Made Simple.

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Journal:  Phys Rev Lett       Date:  1996-10-28       Impact factor: 9.161

2.  pK(a) values and geometries of secondary and tertiary amines complexed to boronic acids-implications for sensor design.

Authors:  S L Wiskur; J J Lavigne; H Ait-Haddou; V Lynch; Y H Chiu; J W Canary; E V Anslyn
Journal:  Org Lett       Date:  2001-05-03       Impact factor: 6.005

3.  Atoms, molecules, solids, and surfaces: Applications of the generalized gradient approximation for exchange and correlation.

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Journal:  Phys Rev B Condens Matter       Date:  1992-09-15

4.  Hybrid Meta-Generalized Gradient Functional Modeling of Boron-Nitrogen Coordinate Covalent Bonds.

Authors:  Joshua A Plumley; Jeffrey D Evanseck
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5.  An enantioselective fluorescent sensor for sugar acids.

Authors:  Jianzhang Zhao; Matthew G Davidson; Mary F Mahon; Gabriele Kociok-Köhn; Tony D James
Journal:  J Am Chem Soc       Date:  2004-12-15       Impact factor: 15.419

Review 6.  Advances in methods and algorithms in a modern quantum chemistry program package.

Authors:  Yihan Shao; Laszlo Fusti Molnar; Yousung Jung; Jörg Kussmann; Christian Ochsenfeld; Shawn T Brown; Andrew T B Gilbert; Lyudmila V Slipchenko; Sergey V Levchenko; Darragh P O'Neill; Robert A DiStasio; Rohini C Lochan; Tao Wang; Gregory J O Beran; Nicholas A Besley; John M Herbert; Ching Yeh Lin; Troy Van Voorhis; Siu Hung Chien; Alex Sodt; Ryan P Steele; Vitaly A Rassolov; Paul E Maslen; Prakashan P Korambath; Ross D Adamson; Brian Austin; Jon Baker; Edward F C Byrd; Holger Dachsel; Robert J Doerksen; Andreas Dreuw; Barry D Dunietz; Anthony D Dutoi; Thomas R Furlani; Steven R Gwaltney; Andreas Heyden; So Hirata; Chao-Ping Hsu; Gary Kedziora; Rustam Z Khalliulin; Phil Klunzinger; Aaron M Lee; Michael S Lee; Wanzhen Liang; Itay Lotan; Nikhil Nair; Baron Peters; Emil I Proynov; Piotr A Pieniazek; Young Min Rhee; Jim Ritchie; Edina Rosta; C David Sherrill; Andrew C Simmonett; Joseph E Subotnik; H Lee Woodcock; Weimin Zhang; Alexis T Bell; Arup K Chakraborty; Daniel M Chipman; Frerich J Keil; Arieh Warshel; Warren J Hehre; Henry F Schaefer; Jing Kong; Anna I Krylov; Peter M W Gill; Martin Head-Gordon
Journal:  Phys Chem Chem Phys       Date:  2006-06-12       Impact factor: 3.676

7.  Semiempirical GGA-type density functional constructed with a long-range dispersion correction.

Authors:  Stefan Grimme
Journal:  J Comput Chem       Date:  2006-11-30       Impact factor: 3.376

8.  Structure and energetics of the hydronium hydration shells.

Authors:  Omer Markovitch; Noam Agmon
Journal:  J Phys Chem A       Date:  2007-03-03       Impact factor: 2.781

9.  Modular fluorescence sensors for saccharides.

Authors:  S Arimori; M L Bell; C S Oh; K A Frimat; T D James
Journal:  Chem Commun (Camb)       Date:  2001-09-21       Impact factor: 6.222

10.  "Click-fluors": modular fluorescent saccharide sensors based on a 1,2,3-triazole ring.

Authors:  David K Scrafton; James E Taylor; Mary F Mahon; John S Fossey; Tony D James
Journal:  J Org Chem       Date:  2008-03-13       Impact factor: 4.354

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  3 in total

1.  Fluorescent boronic acid polymer grafted on silica particles for affinity separation of saccharides.

Authors:  Zhifeng Xu; Khan Mohammad Ahsan Uddin; Tripta Kamra; Joachim Schnadt; Lei Ye
Journal:  ACS Appl Mater Interfaces       Date:  2014-01-28       Impact factor: 9.229

Review 2.  Recent advances in fluorescent arylboronic acids for glucose sensing.

Authors:  Jon Stefan Hansen; Jørn Bolstad Christensen
Journal:  Biosensors (Basel)       Date:  2013-12-10

Review 3.  Colorimetric Sugar Sensing Using Boronic Acid-Substituted Azobenzenes.

Authors:  Yuya Egawa; Ryotaro Miki; Toshinobu Seki
Journal:  Materials (Basel)       Date:  2014-02-14       Impact factor: 3.623

  3 in total

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