Literature DB >> 17388314

Structure and energetics of the hydronium hydration shells.

Omer Markovitch1, Noam Agmon.   

Abstract

Proton solvation and proton mobility are both subjects of great interest in chemistry and biology. Here we have studied the hydration shells of H3O+ at temperatures ranging from 260 to 340 K using the multistate empirical valence-bond methodology (MS-EVB2). We have calculated the radial distribution functions for the protonium and its solvation shells. Furthermore, we have determined the Gibbs energy and the enthalpy for hydrogen bonds donated or accepted by the first two solvation shells, in comparison to bulk water. We find systematic bond-energy differences that appear to agree with a recent IR study on proton hydration. Implications of our results to various proton mobility mechanisms are discussed.

Entities:  

Year:  2007        PMID: 17388314     DOI: 10.1021/jp068960g

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  30 in total

1.  On the question of hydronium binding to ATP-synthase membrane rotors.

Authors:  Vanessa Leone; Alexander Krah; José D Faraldo-Gómez
Journal:  Biophys J       Date:  2010-10-06       Impact factor: 4.033

Review 2.  Proton-coupled electron transfer.

Authors:  My Hang V Huynh; Thomas J Meyer
Journal:  Chem Rev       Date:  2007-11       Impact factor: 60.622

3.  Many-body energies during proton transfer in an aqueous system.

Authors:  Ajay Chaudhari; Gul Afroz Meraj; Shyi-Long Lee
Journal:  J Mol Model       Date:  2010-02-27       Impact factor: 1.810

4.  A 'clusters-in-liquid' method for calculating infrared spectra identifies the proton-transfer mode in acidic aqueous solutions.

Authors:  Waldemar Kulig; Noam Agmon
Journal:  Nat Chem       Date:  2012-11-25       Impact factor: 24.427

5.  A computational investigation of the nitrogen-boron interaction in o-(N,N-dialkylaminomethyl)arylboronate systems.

Authors:  Joseph D Larkin; John S Fossey; Tony D James; Bernard R Brooks; Charles W Bock
Journal:  J Phys Chem A       Date:  2010-11-05       Impact factor: 2.781

6.  A quantitative model for oxygen uptake and release in a family of hemeproteins.

Authors:  Juan P Bustamante; María E Szretter; Mariela Sued; Marcelo A Martí; Darío A Estrin; Leonardo Boechi
Journal:  Bioinformatics       Date:  2016-02-15       Impact factor: 6.937

7.  Infrared spectroscopy: The acid test for water structure.

Authors:  Noam Agmon
Journal:  Nat Chem       Date:  2016-03       Impact factor: 24.427

8.  The Goldilocks surface.

Authors:  Erwin A Vogler
Journal:  Biomaterials       Date:  2011-06-17       Impact factor: 12.479

9.  Single-file water in nanopores.

Authors:  Jürgen Köfinger; Gerhard Hummer; Christoph Dellago
Journal:  Phys Chem Chem Phys       Date:  2011-07-21       Impact factor: 3.676

10.  A Conspectus of Cellular Mechanisms of Nitrosothiol Formation from Nitric Oxide.

Authors:  Qian Li; Jack R Lancaster
Journal:  For Immunopathol Dis Therap       Date:  2012
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