Literature DB >> 21041483

UMI, a novel RNF168 ubiquitin binding domain involved in the DNA damage signaling pathway.

Sabrina Pinato1, Marco Gatti, Cristina Scandiuzzi, Stefano Confalonieri, Lorenza Penengo.   

Abstract

Ubiquitination regulates important cellular processes, including the DNA damage response (DDR) and DNA repair. The complexity of the ubiquitin-mediated signals is decoded by ubiquitin receptors, which contain protein modules named ubiquitin binding domains (UBDs). We previously identified a new ubiquitin ligase, RNF168, involved in DDR and endowed with two UBDs named MIU (motif interacting with ubiquitin). Here we have provided the identification of a novel UBD, the UMI (UIM- and MIU-related UBD), present in RNF168, and characterized the interaction surface with ubiquitin, centered on two Leu residues. We have demonstrated that integrity of the UMI, in addition to the MIUs, is necessary for the proper localization of RNF168 and for ubiquitination of nuclear proteins, including histone H2A. Finally, we have shown that simultaneous inactivation of UMI and MIUs prevents the recruitment to DDR foci of the crucial downstream mediator 53BP1.

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Year:  2010        PMID: 21041483      PMCID: PMC3019843          DOI: 10.1128/MCB.00818-10

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  30 in total

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Authors:  Jason M Winget; Thibault Mayor
Journal:  Mol Cell       Date:  2010-06-11       Impact factor: 17.970

2.  Molecular mechanisms of coupled monoubiquitination.

Authors:  Tanja Woelk; Barbara Oldrini; Elena Maspero; Stefano Confalonieri; Elena Cavallaro; Pier Paolo Di Fiore; Simona Polo
Journal:  Nat Cell Biol       Date:  2006-10-01       Impact factor: 28.824

Review 3.  The DNA damage response: ten years after.

Authors:  J Wade Harper; Stephen J Elledge
Journal:  Mol Cell       Date:  2007-12-14       Impact factor: 17.970

Review 4.  Principles of ubiquitin and SUMO modifications in DNA repair.

Authors:  Steven Bergink; Stefan Jentsch
Journal:  Nature       Date:  2009-03-26       Impact factor: 49.962

Review 5.  Ubiquitin in trafficking: the network at work.

Authors:  Filippo Acconcia; Sara Sigismund; Simona Polo
Journal:  Exp Cell Res       Date:  2008-10-28       Impact factor: 3.905

Review 6.  The emerging complexity of protein ubiquitination.

Authors:  David Komander
Journal:  Biochem Soc Trans       Date:  2009-10       Impact factor: 5.407

Review 7.  Ubiquitin-binding domains.

Authors:  James H Hurley; Sangho Lee; Gali Prag
Journal:  Biochem J       Date:  2006-11-01       Impact factor: 3.857

8.  RAP80 targets BRCA1 to specific ubiquitin structures at DNA damage sites.

Authors:  Bijan Sobhian; Genze Shao; Dana R Lilli; Aedín C Culhane; Lisa A Moreau; Bing Xia; David M Livingston; Roger A Greenberg
Journal:  Science       Date:  2007-05-25       Impact factor: 47.728

9.  Ubiquitin-binding protein RAP80 mediates BRCA1-dependent DNA damage response.

Authors:  Hongtae Kim; Junjie Chen; Xiaochun Yu
Journal:  Science       Date:  2007-05-25       Impact factor: 47.728

10.  Megabase chromatin domains involved in DNA double-strand breaks in vivo.

Authors:  E P Rogakou; C Boon; C Redon; W M Bonner
Journal:  J Cell Biol       Date:  1999-09-06       Impact factor: 10.539

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  37 in total

1.  A new non-catalytic role for ubiquitin ligase RNF8 in unfolding higher-order chromatin structure.

Authors:  Martijn S Luijsterburg; Klara Acs; Leena Ackermann; Wouter W Wiegant; Simon Bekker-Jensen; Dorthe H Larsen; Kum Kum Khanna; Haico van Attikum; Niels Mailand; Nico P Dantuma
Journal:  EMBO J       Date:  2012-04-24       Impact factor: 11.598

2.  Ring finger protein RNF169 antagonizes the ubiquitin-dependent signaling cascade at sites of DNA damage.

Authors:  Jie Chen; Wanjuan Feng; Jun Jiang; Yiqun Deng; Michael S Y Huen
Journal:  J Biol Chem       Date:  2012-06-25       Impact factor: 5.157

3.  H1 provides the missing link.

Authors:  Michael S Y Huen; Junjie Chen
Journal:  Cell Res       Date:  2015-11-24       Impact factor: 25.617

4.  The deubiquitylating enzyme USP44 counteracts the DNA double-strand break response mediated by the RNF8 and RNF168 ubiquitin ligases.

Authors:  Anna Mosbech; Claudia Lukas; Simon Bekker-Jensen; Niels Mailand
Journal:  J Biol Chem       Date:  2013-04-24       Impact factor: 5.157

Review 5.  The spatial and temporal organization of ubiquitin networks.

Authors:  Caroline Grabbe; Koraljka Husnjak; Ivan Dikic
Journal:  Nat Rev Mol Cell Biol       Date:  2011-03-30       Impact factor: 94.444

Review 6.  Histone ubiquitylation and its roles in transcription and DNA damage response.

Authors:  Rithy Meas; Peng Mao
Journal:  DNA Repair (Amst)       Date:  2015-09-16

7.  An E2-guided E3 Screen Identifies the RNF17-UBE2U Pair as Regulator of the Radiosensitivity, Immunodeficiency, Dysmorphic Features, and Learning Difficulties (RIDDLE) Syndrome Protein RNF168.

Authors:  Yingying Guo; Liwei An; Hoi-Man Ng; Shirley M H Sy; Michael S Y Huen
Journal:  J Biol Chem       Date:  2016-11-30       Impact factor: 5.157

Review 8.  Molecular Basis for K63-Linked Ubiquitination Processes in Double-Strand DNA Break Repair: A Focus on Kinetics and Dynamics.

Authors:  Brian L Lee; Anamika Singh; J N Mark Glover; Michael J Hendzel; Leo Spyracopoulos
Journal:  J Mol Biol       Date:  2017-06-03       Impact factor: 5.469

9.  Effect of surfactant hydrophobicity on the pathway for unfolding of ubiquitin.

Authors:  Bryan F Shaw; Grégory F Schneider; George M Whitesides
Journal:  J Am Chem Soc       Date:  2012-10-31       Impact factor: 15.419

Review 10.  Structural mechanisms underlying signaling in the cellular response to DNA double strand breaks.

Authors:  Inbal Mermershtain; J N Mark Glover
Journal:  Mutat Res       Date:  2013-07-27       Impact factor: 2.433

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