Literature DB >> 23896398

Structural mechanisms underlying signaling in the cellular response to DNA double strand breaks.

Inbal Mermershtain1, J N Mark Glover.   

Abstract

DNA double strand breaks (DSBs) constitute one of the most dangerous forms of DNA damage. In actively replicating cells, these breaks are first recognized by specialized proteins that initiate a signal transduction cascade that modulates the cell cycle and results in the repair of the breaks by homologous recombination (HR). Protein signaling in response to double strand breaks involves phosphorylation and ubiquitination of chromatin and a variety of associated proteins. Here we review the emerging structural principles that underlie how post-translational protein modifications control protein signaling that emanates from these DNA lesions.
Copyright © 2013 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  BRCA1 C-terminal domain; BRCT; BRCT domains; DSB; Double-strand break signaling; FHA domains; FHAf; HR; MRN; Mre11–Rad50–NBS1; OTUB; Phosphorylation signaling; RIDDLE syndrome; UIM; Ubc13; Ubiquitin; double strand break; homologous recombination; orkhead-associated domain.; otubain or ovarian tumor domain protein; radiosensitivity, immunodeficiency, dysmorphic features and learning difficulties; ubiquitin interaction motif

Mesh:

Substances:

Year:  2013        PMID: 23896398      PMCID: PMC3818410          DOI: 10.1016/j.mrfmmm.2013.07.004

Source DB:  PubMed          Journal:  Mutat Res        ISSN: 0027-5107            Impact factor:   2.433


  111 in total

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Authors:  Maria Rodriguez; Xiaochun Yu; Junjie Chen; Zhou Songyang
Journal:  J Biol Chem       Date:  2003-10-24       Impact factor: 5.157

2.  Molecular basis of BACH1/FANCJ recognition by TopBP1 in DNA replication checkpoint control.

Authors:  Charles Chung Yun Leung; Zihua Gong; Junjie Chen; J N Mark Glover
Journal:  J Biol Chem       Date:  2010-12-02       Impact factor: 5.157

3.  MDC1 directly binds phosphorylated histone H2AX to regulate cellular responses to DNA double-strand breaks.

Authors:  Manuel Stucki; Julie A Clapperton; Duaa Mohammad; Michael B Yaffe; Stephen J Smerdon; Stephen P Jackson
Journal:  Cell       Date:  2005-12-29       Impact factor: 41.582

4.  The FHA domain: a putative nuclear signalling domain found in protein kinases and transcription factors.

Authors:  K Hofmann; P Bucher
Journal:  Trends Biochem Sci       Date:  1995-09       Impact factor: 13.807

5.  Noncanonical MMS2-encoded ubiquitin-conjugating enzyme functions in assembly of novel polyubiquitin chains for DNA repair.

Authors:  R M Hofmann; C M Pickart
Journal:  Cell       Date:  1999-03-05       Impact factor: 41.582

6.  Structural basis for role of ring finger protein RNF168 RING domain.

Authors:  Xiaoqin Zhang; Jie Chen; Minhao Wu; Huakai Wu; Aloysius Wilfred Arokiaraj; Chengliang Wang; Weichang Zhang; Yue Tao; Michael S Y Huen; Jianye Zang
Journal:  Cell Cycle       Date:  2012-01-15       Impact factor: 4.534

7.  Structure of a second BRCT domain identified in the nijmegen breakage syndrome protein Nbs1 and its function in an MDC1-dependent localization of Nbs1 to DNA damage sites.

Authors:  Chao Xu; Liming Wu; Gaofeng Cui; Maria Victoria Botuyan; Junjie Chen; Georges Mer
Journal:  J Mol Biol       Date:  2008-06-14       Impact factor: 5.469

8.  CCDC98 targets BRCA1 to DNA damage sites.

Authors:  Zixing Liu; Jiaxue Wu; Xiaochun Yu
Journal:  Nat Struct Mol Biol       Date:  2007-07-22       Impact factor: 15.369

9.  E2 interaction and dimerization in the crystal structure of TRAF6.

Authors:  Qian Yin; Su-Chang Lin; Betty Lamothe; Miao Lu; Yu-Chih Lo; Gregory Hura; Lixin Zheng; Rebecca L Rich; Alejandro D Campos; David G Myszka; Michael J Lenardo; Bryant G Darnay; Hao Wu
Journal:  Nat Struct Mol Biol       Date:  2009-05-24       Impact factor: 15.369

10.  The mechanism of OTUB1-mediated inhibition of ubiquitination.

Authors:  Reuven Wiener; Xiangbin Zhang; Tao Wang; Cynthia Wolberger
Journal:  Nature       Date:  2012-02-22       Impact factor: 49.962

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  12 in total

Review 1.  DNA repair in ischemic acute kidney injury.

Authors:  Jeffrey D Pressly; Frank Park
Journal:  Am J Physiol Renal Physiol       Date:  2016-12-07

Review 2.  Two-way communications between ubiquitin-like modifiers and DNA.

Authors:  Helle D Ulrich
Journal:  Nat Struct Mol Biol       Date:  2014-04       Impact factor: 15.369

3.  Dimerization Mediated by a Divergent Forkhead-associated Domain Is Essential for the DNA Damage and Spindle Functions of Fission Yeast Mdb1.

Authors:  Shukun Luo; Xiaoran Xin; Li-Lin Du; Keqiong Ye; Yi Wei
Journal:  J Biol Chem       Date:  2015-07-09       Impact factor: 5.157

4.  Peptide library approach to uncover phosphomimetic inhibitors of the BRCA1 C-terminal domain.

Authors:  E Railey White; Luxin Sun; Zhong Ma; Jason M Beckta; Brittany A Danzig; David E Hacker; Melissa Huie; David C Williams; Ross A Edwards; Kristoffer Valerie; J N Mark Glover; Matthew C T Hartman
Journal:  ACS Chem Biol       Date:  2015-02-05       Impact factor: 5.100

5.  Increased DNA damage and repair deficiency in granulosa cells are associated with ovarian aging in rhesus monkey.

Authors:  Dongdong Zhang; Xiaoqian Zhang; Ming Zeng; Jihong Yuan; Mengyuan Liu; Yu Yin; Xueqing Wu; David L Keefe; Lin Liu
Journal:  J Assist Reprod Genet       Date:  2015-05-10       Impact factor: 3.412

Review 6.  PALB2: the hub of a network of tumor suppressors involved in DNA damage responses.

Authors:  Jung-Young Park; Fan Zhang; Paul R Andreassen
Journal:  Biochim Biophys Acta       Date:  2014-07-03

7.  Binding of the Fkh1 Forkhead Associated Domain to a Phosphopeptide within the Mph1 DNA Helicase Regulates Mating-Type Switching in Budding Yeast.

Authors:  Antoinette M Dummer; Zhangli Su; Rachel Cherney; Koyi Choi; John Denu; Xiaolan Zhao; Catherine A Fox
Journal:  PLoS Genet       Date:  2016-06-03       Impact factor: 5.917

Review 8.  The Knowns Unknowns: Exploring the Homologous Recombination Repair Pathway in Toxoplasma gondii.

Authors:  Ignacio M Fenoy; Silvina S Bogado; Susana M Contreras; Vanesa Gottifredi; Sergio O Angel
Journal:  Front Microbiol       Date:  2016-05-03       Impact factor: 5.640

Review 9.  C1D family proteins in coordinating RNA processing, chromosome condensation and DNA damage response.

Authors:  Rebecca A Jackson; Jocelyn Shumei Wu; Ee Sin Chen
Journal:  Cell Div       Date:  2016-03-09       Impact factor: 5.130

Review 10.  Writers, Readers, and Erasers of Histone Ubiquitylation in DNA Double-Strand Break Repair.

Authors:  Godelieve Smeenk; Niels Mailand
Journal:  Front Genet       Date:  2016-06-28       Impact factor: 4.599

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