Literature DB >> 22531782

A new non-catalytic role for ubiquitin ligase RNF8 in unfolding higher-order chromatin structure.

Martijn S Luijsterburg1, Klara Acs, Leena Ackermann, Wouter W Wiegant, Simon Bekker-Jensen, Dorthe H Larsen, Kum Kum Khanna, Haico van Attikum, Niels Mailand, Nico P Dantuma.   

Abstract

The ubiquitin ligases RNF8 and RNF168 orchestrate DNA damage signalling through the ubiquitylation of histone H2A and the recruitment of downstream repair factors. Here, we demonstrate that RNF8, but not RNF168 or the canonical H2A ubiquitin ligase RNF2, mediates extensive chromatin decondensation. Our data show that CHD4, the catalytic subunit of the NuRD complex, interacts with RNF8 and is essential for RNF8-mediated chromatin unfolding. The chromatin remodelling activity of CHD4 promotes efficient ubiquitin conjugation and assembly of RNF168 and BRCA1 at DNA double-strand breaks. Interestingly, RNF8-mediated recruitment of CHD4 and subsequent chromatin remodelling were independent of the ubiquitin-ligase activity of RNF8, but involved a non-canonical interaction with the forkhead-associated (FHA) domain. Our study reveals a new mechanism of chromatin remodelling-assisted ubiquitylation, which involves the cooperation between CHD4 and RNF8 to create a local chromatin environment that is permissive to the assembly of checkpoint and repair machineries at DNA lesions.

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Year:  2012        PMID: 22531782      PMCID: PMC3365417          DOI: 10.1038/emboj.2012.104

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  57 in total

1.  The ACF1 complex is required for DNA double-strand break repair in human cells.

Authors:  Li Lan; Ayako Ui; Satoshi Nakajima; Kotomi Hatakeyama; Mikiko Hoshi; Reiko Watanabe; Susan M Janicki; Hideaki Ogiwara; Takashi Kohno; Shin-Ichiro Kanno; Akira Yasui
Journal:  Mol Cell       Date:  2010-12-22       Impact factor: 17.970

2.  Positional stability of single double-strand breaks in mammalian cells.

Authors:  Evi Soutoglou; Jonas F Dorn; Kundan Sengupta; Maria Jasin; Andre Nussenzweig; Thomas Ried; Gaudenz Danuser; Tom Misteli
Journal:  Nat Cell Biol       Date:  2007-05-07       Impact factor: 28.824

Review 3.  The human Mi-2/NuRD complex and gene regulation.

Authors:  S A Denslow; P A Wade
Journal:  Oncogene       Date:  2007-08-13       Impact factor: 9.867

4.  UMI, a novel RNF168 ubiquitin binding domain involved in the DNA damage signaling pathway.

Authors:  Sabrina Pinato; Marco Gatti; Cristina Scandiuzzi; Stefano Confalonieri; Lorenza Penengo
Journal:  Mol Cell Biol       Date:  2010-11-01       Impact factor: 4.272

5.  HERC2 coordinates ubiquitin-dependent assembly of DNA repair factors on damaged chromosomes.

Authors:  Simon Bekker-Jensen; Jannie Rendtlew Danielsen; Kasper Fugger; Irina Gromova; Annika Nerstedt; Claudia Lukas; Jiri Bartek; Jiri Lukas; Niels Mailand
Journal:  Nat Cell Biol       Date:  2009-12-20       Impact factor: 28.824

6.  ATP-dependent chromatin remodeling facilitates nucleotide excision repair of UV-induced DNA lesions in synthetic dinucleosomes.

Authors:  K Ura; M Araki; H Saeki; C Masutani; T Ito; S Iwai; T Mizukoshi; Y Kaneda; F Hanaoka
Journal:  EMBO J       Date:  2001-04-17       Impact factor: 11.598

Review 7.  Assembly of checkpoint and repair machineries at DNA damage sites.

Authors:  Michael S Y Huen; Junjie Chen
Journal:  Trends Biochem Sci       Date:  2009-10-28       Impact factor: 13.807

8.  ATM mediated phosphorylation of CHD4 contributes to genome maintenance.

Authors:  Aaron J Urquhart; Magtouf Gatei; Derek J Richard; Kum Kum Khanna
Journal:  Genome Integr       Date:  2011-01-10

9.  In vivo localization of DNA sequences and visualization of large-scale chromatin organization using lac operator/repressor recognition.

Authors:  C C Robinett; A Straight; G Li; C Willhelm; G Sudlow; A Murray; A S Belmont
Journal:  J Cell Biol       Date:  1996-12       Impact factor: 10.539

10.  RAD18 transmits DNA damage signalling to elicit homologous recombination repair.

Authors:  Jun Huang; Michael S Y Huen; Hongtae Kim; Charles Chung Yun Leung; J N Mark Glover; Xiaochun Yu; Junjie Chen
Journal:  Nat Cell Biol       Date:  2009-04-26       Impact factor: 28.824

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  60 in total

1.  Ring finger protein RNF169 antagonizes the ubiquitin-dependent signaling cascade at sites of DNA damage.

Authors:  Jie Chen; Wanjuan Feng; Jun Jiang; Yiqun Deng; Michael S Y Huen
Journal:  J Biol Chem       Date:  2012-06-25       Impact factor: 5.157

Review 2.  Spatiotemporal regulation of posttranslational modifications in the DNA damage response.

Authors:  Nico P Dantuma; Haico van Attikum
Journal:  EMBO J       Date:  2015-12-01       Impact factor: 11.598

3.  CHD4 mutations promote endometrial cancer stemness by activating TGF-beta signaling.

Authors:  Yang Li; Qingxin Liu; Daniel J McGrail; Hui Dai; Kaiyi Li; Shiaw-Yih Lin
Journal:  Am J Cancer Res       Date:  2018-05-01       Impact factor: 6.166

Review 4.  Crosstalk between ubiquitin and other post-translational modifications on chromatin during double-strand break repair.

Authors:  Yu Zhao; Joshua R Brickner; Mona C Majid; Nima Mosammaparast
Journal:  Trends Cell Biol       Date:  2014-02-23       Impact factor: 20.808

Review 5.  Customized chemotherapy in metastatic non-small cell lung cancer (NSCLC).

Authors:  Jia Wei; Teresa Moran; Zhengyun Zou; Xiaoping Qian; Lifeng Wang; Carlos Camps; Wenjing Hu; Imane Chaib; Belén Sanchez; Lixia Xu; Niki Karachaliou; María Sanchez-Ronco; Baorui Liu; Rafael Rosell
Journal:  Transl Lung Cancer Res       Date:  2013-06

6.  The Epstein-Barr Virus BMRF1 Protein Activates Transcription and Inhibits the DNA Damage Response by Binding NuRD.

Authors:  Samuel G Salamun; Justine Sitz; Carlos F De La Cruz-Herrera; Jaime Yockteng-Melgar; Edyta Marcon; Jack Greenblatt; Amelie Fradet-Turcotte; Lori Frappier
Journal:  J Virol       Date:  2019-10-29       Impact factor: 5.103

7.  RNF8 regulates active epigenetic modifications and escape gene activation from inactive sex chromosomes in post-meiotic spermatids.

Authors:  Ho-Su Sin; Artem Barski; Fan Zhang; Andrey V Kartashov; Andre Nussenzweig; Junjie Chen; Paul R Andreassen; Satoshi H Namekawa
Journal:  Genes Dev       Date:  2012-12-15       Impact factor: 11.361

8.  Generation of cell-based systems to visualize chromosome damage and translocations in living cells.

Authors:  Vassilis Roukos; Rebecca C Burgess; Tom Misteli
Journal:  Nat Protoc       Date:  2014-09-25       Impact factor: 13.491

Review 9.  Chromatin and the genome integrity network.

Authors:  Manolis Papamichos-Chronakis; Craig L Peterson
Journal:  Nat Rev Genet       Date:  2013-01       Impact factor: 53.242

Review 10.  DNA damage, chromatin, and transcription: the trinity of aging.

Authors:  Rebecca C Burgess; Tom Misteli; Philipp Oberdoerffer
Journal:  Curr Opin Cell Biol       Date:  2012-08-17       Impact factor: 8.382

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