Literature DB >> 20976122

Synchrotron Radiation Provides a Plausible Explanation for the Generation of a Free Radical Adduct of Thioxolone in Mutant Carbonic Anhydrase II.

Katherine H Sippel1, Caroli Genis, Lakshmanan Govindasamy, Mavis Agbandje-McKenna, James J Kiddle, Brian C Tripp, Robert McKenna.   

Abstract

Thioxolone acts as a prodrug in the presence of carbonic anhydrase II (CA II), whereby the molecule is cleaved by thioester hydrolysis to the carbonic anhydrase inhibitor, 4-mercaptobenzene-1,3-diol (TH0). Thioxolone was soaked into the proton transfer mutant H64A of CA II in an effort to capture a reaction intermediate via X-ray crystallography. Structure determination of the 1.2 Å resolution data revealed the TH0 had been modified to a 4,4'-disulfanediyldibenzene-1,3-diol, a product of crystallization conditions, and a zinc ligated 2,4-dihydroxybenzenesulfenic acid, most likely induced by radiation damage. Neither ligand was likely a result of an enzymatic mechanism.

Entities:  

Year:  2010        PMID: 20976122      PMCID: PMC2957018          DOI: 10.1021/jz100954h

Source DB:  PubMed          Journal:  J Phys Chem Lett        ISSN: 1948-7185            Impact factor:   6.475


  24 in total

1.  The 'fingerprint' that X-rays can leave on structures.

Authors:  R B Ravelli; S M McSweeney
Journal:  Structure       Date:  2000-03-15       Impact factor: 5.006

Review 2.  Physical and chemical considerations of damage induced in protein crystals by synchrotron radiation: a radiation chemical perspective.

Authors:  Peter O'Neill; David L Stevens; Elspeth F Garman
Journal:  J Synchrotron Radiat       Date:  2002-11-01       Impact factor: 2.616

3.  Evidence for the formation of disulfide radicals in protein crystals upon X-ray irradiation.

Authors:  Martin Weik; Jacqueline Bergès; Maria L Raves; Piet Gros; Sean McSweeney; Israel Silman; Joel L Sussman; Chantal Houée-Levin; Raimond B G Ravelli
Journal:  J Synchrotron Radiat       Date:  2002-11-01       Impact factor: 2.616

4.  PHENIX: building new software for automated crystallographic structure determination.

Authors:  Paul D Adams; Ralf W Grosse-Kunstleve; Li Wei Hung; Thomas R Ioerger; Airlie J McCoy; Nigel W Moriarty; Randy J Read; James C Sacchettini; Nicholas K Sauter; Thomas C Terwilliger
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2002-10-21

5.  Specific chemical and structural damage to proteins produced by synchrotron radiation.

Authors:  M Weik; R B Ravelli; G Kryger; S McSweeney; M L Raves; M Harel; P Gros; I Silman; J Kroon; J L Sussman
Journal:  Proc Natl Acad Sci U S A       Date:  2000-01-18       Impact factor: 11.205

6.  Structural and kinetic analysis of the chemical rescue of the proton transfer function of carbonic anhydrase II.

Authors:  D Duda; C Tu; M Qian; P Laipis; M Agbandje-McKenna; D N Silverman; R McKenna
Journal:  Biochemistry       Date:  2001-02-13       Impact factor: 3.162

7.  Inhibition profiling of human carbonic anhydrase II by high-throughput screening of structurally diverse, biologically active compounds.

Authors:  Rema Iyer; Albert A Barrese; Shilpa Parakh; Christian N Parker; Brian C Tripp
Journal:  J Biomol Screen       Date:  2006-07-20

8.  Crystal structure of RNA 3'-terminal phosphate cyclase, a ubiquitous enzyme with unusual topology.

Authors:  G J Palm; E Billy; W Filipowicz; A Wlodawer
Journal:  Structure       Date:  2000-01-15       Impact factor: 5.006

9.  Allosteric disulfide bonds.

Authors:  Bryan Schmidt; Lorraine Ho; Philip J Hogg
Journal:  Biochemistry       Date:  2006-06-20       Impact factor: 3.162

10.  Photoionization studies of sulfur radicals and products of their reactions.

Authors:  B M Cheng; E P Chew; W C Hung; J Eberhard; Y P Lee
Journal:  J Synchrotron Radiat       Date:  1998-05-01       Impact factor: 2.616

View more
  1 in total

1.  Structural and kinetic effects on changes in the CO(2) binding pocket of human carbonic anhydrase II.

Authors:  Dayne West; Chae Un Kim; Chingkuang Tu; Arthur H Robbins; Sol M Gruner; David N Silverman; Robert McKenna
Journal:  Biochemistry       Date:  2012-11-02       Impact factor: 3.162

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.