Literature DB >> 22160707

Drosophila Piwi functions downstream of piRNA production mediating a chromatin-based transposon silencing mechanism in female germ line.

Sidney H Wang1, Sarah C R Elgin.   

Abstract

Transposon control is a critical process during reproduction. The PIWI family proteins can play a key role, using a piRNA-mediated slicing mechanism to suppress transposon activity posttranscriptionally. In Drosophila melanogaster, Piwi is predominantly localized in the nucleus and has been implicated in heterochromatin formation. Here, we use female germ-line-specific depletion to study Piwi function. This depletion of Piwi leads to infertility and to axis specification defects in the developing egg chambers; correspondingly, widespread loss of transposon silencing is observed. Germ-line Piwi does not appear to be required for piRNA production. Instead, Piwi requires Aubergine (and presumably secondary piRNA) for proper localization. A subset of transposons that show significant overexpression in germ-line Piwi-depleted ovaries exhibit a corresponding loss of HP1a and H3K9me2. Germ-line HP1a depletion also leads to a loss of transposon silencing, demonstrating the functional requirement for HP1a enrichment at these loci. Considering our results and those of others, we infer that germ-line Piwi functions downstream of piRNA production to promote silencing of some transposons via recruitment of HP1a. Thus, in addition to its better-known function in posttranscriptional silencing, piRNA also appears to function in a targeting mechanism for heterochromatin formation mediated by Piwi.

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Year:  2011        PMID: 22160707      PMCID: PMC3248523          DOI: 10.1073/pnas.1107892109

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  50 in total

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Authors:  J C Eissenberg; S C Elgin
Journal:  Curr Opin Genet Dev       Date:  2000-04       Impact factor: 5.578

2.  Quantitative analysis of gene function in the Drosophila embryo.

Authors:  W D Tracey; X Ning; M Klingler; S G Kramer; J P Gergen
Journal:  Genetics       Date:  2000-01       Impact factor: 4.562

3.  Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method.

Authors:  K J Livak; T D Schmittgen
Journal:  Methods       Date:  2001-12       Impact factor: 3.608

4.  piRNA-mediated nuclear accumulation of retrotransposon transcripts in the Drosophila female germline.

Authors:  Séverine Chambeyron; Anna Popkova; Geneviève Payen-Groschêne; Christine Brun; Dorsaf Laouini; Alain Pelisson; Alain Bucheton
Journal:  Proc Natl Acad Sci U S A       Date:  2008-09-22       Impact factor: 11.205

5.  Methylation of histone H3 lysine 9 creates a binding site for HP1 proteins.

Authors:  M Lachner; D O'Carroll; S Rea; K Mechtler; T Jenuwein
Journal:  Nature       Date:  2001-03-01       Impact factor: 49.962

6.  Central role of Drosophila SU(VAR)3-9 in histone H3-K9 methylation and heterochromatic gene silencing.

Authors:  Gunnar Schotta; Anja Ebert; Veiko Krauss; Andreas Fischer; Jan Hoffmann; Stephen Rea; Thomas Jenuwein; Rainer Dorn; Gunter Reuter
Journal:  EMBO J       Date:  2002-03-01       Impact factor: 11.598

7.  ARGONAUTE1 is required for efficient RNA interference in Drosophila embryos.

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Journal:  Proc Natl Acad Sci U S A       Date:  2002-05-14       Impact factor: 11.205

8.  Heterochromatic silencing and HP1 localization in Drosophila are dependent on the RNAi machinery.

Authors:  Manika Pal-Bhadra; Boris A Leibovitch; Sumit G Gandhi; Madhusudana Rao Chikka; Madhusudana Rao; Utpal Bhadra; James A Birchler; Sarah C R Elgin
Journal:  Science       Date:  2004-01-30       Impact factor: 47.728

9.  Regulation of heterochromatic silencing and histone H3 lysine-9 methylation by RNAi.

Authors:  Thomas A Volpe; Catherine Kidner; Ira M Hall; Grace Teng; Shiv I S Grewal; Robert A Martienssen
Journal:  Science       Date:  2002-08-22       Impact factor: 47.728

10.  RNAi-mediated targeting of heterochromatin by the RITS complex.

Authors:  André Verdel; Songtao Jia; Scott Gerber; Tomoyasu Sugiyama; Steven Gygi; Shiv I S Grewal; Danesh Moazed
Journal:  Science       Date:  2004-01-02       Impact factor: 47.728

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  112 in total

1.  shutdown is a component of the Drosophila piRNA biogenesis machinery.

Authors:  Jonathan B Preall; Benjamin Czech; Paloma M Guzzardo; Felix Muerdter; Gregory J Hannon
Journal:  RNA       Date:  2012-07-02       Impact factor: 4.942

2.  Targeting of P-Element Reporters to Heterochromatic Domains by Transposable Element 1360 in Drosophila melanogaster.

Authors:  Kathryn L Huisinga; Nicole C Riddle; Wilson Leung; Shachar Shimonovich; Stephen McDaniel; Alejandra Figueroa-Clarevega; Sarah C R Elgin
Journal:  Genetics       Date:  2015-12-17       Impact factor: 4.562

Review 3.  Nuclear Noncoding RNAs and Genome Stability.

Authors:  Jasbeer S Khanduja; Isabel A Calvo; Richard I Joh; Ian T Hill; Mo Motamedi
Journal:  Mol Cell       Date:  2016-07-07       Impact factor: 17.970

Review 4.  Position-effect variegation, heterochromatin formation, and gene silencing in Drosophila.

Authors:  Sarah C R Elgin; Gunter Reuter
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-08-01       Impact factor: 10.005

5.  Cis- and Trans-regulatory Effects on Gene Expression in a Natural Population of Drosophila melanogaster.

Authors:  Naoki Osada; Ryutaro Miyagi; Aya Takahashi
Journal:  Genetics       Date:  2017-06-14       Impact factor: 4.562

6.  Heterochromatic histone modifications at transposons in Xenopus tropicalis embryos.

Authors:  Ila van Kruijsbergen; Saartje Hontelez; Dei M Elurbe; Simon J van Heeringen; Martijn A Huynen; Gert Jan C Veenstra
Journal:  Dev Biol       Date:  2016-09-14       Impact factor: 3.582

7.  Nuclear RNA export factor variant initiates piRNA-guided co-transcriptional silencing.

Authors:  Kensaku Murano; Yuka W Iwasaki; Hirotsugu Ishizu; Akane Mashiko; Aoi Shibuya; Shu Kondo; Shungo Adachi; Saori Suzuki; Kuniaki Saito; Tohru Natsume; Mikiko C Siomi; Haruhiko Siomi
Journal:  EMBO J       Date:  2019-08-01       Impact factor: 11.598

Review 8.  RNA interference in the nucleus: roles for small RNAs in transcription, epigenetics and beyond.

Authors:  Stephane E Castel; Robert A Martienssen
Journal:  Nat Rev Genet       Date:  2013-02       Impact factor: 53.242

Review 9.  HP1a: a structural chromosomal protein regulating transcription.

Authors:  Joel C Eissenberg; Sarah C R Elgin
Journal:  Trends Genet       Date:  2014-02-17       Impact factor: 11.639

Review 10.  Untangling the web: the diverse functions of the PIWI/piRNA pathway.

Authors:  Sneha Ramesh Mani; Celina E Juliano
Journal:  Mol Reprod Dev       Date:  2013-06-27       Impact factor: 2.609

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