Literature DB >> 19812547

A regulatory circuit for piwi by the large Maf gene traffic jam in Drosophila.

Kuniaki Saito1, Sachi Inagaki, Toutai Mituyama, Yoshinori Kawamura, Yukiteru Ono, Eri Sakota, Hazuki Kotani, Kiyoshi Asai, Haruhiko Siomi, Mikiko C Siomi.   

Abstract

PIWI-interacting RNAs (piRNAs) silence retrotransposons in Drosophila germ lines by associating with the PIWI proteins Argonaute 3 (AGO3), Aubergine (Aub) and Piwi. piRNAs in Drosophila are produced from intergenic repetitive genes and piRNA clusters by two systems: the primary processing pathway and the amplification loop. The amplification loop occurs in a Dicer-independent, PIWI-Slicer-dependent manner. However, primary piRNA processing remains elusive. Here we analysed piRNA processing in a Drosophila ovarian somatic cell line where Piwi, but not Aub or AGO3, is expressed; thus, only the primary piRNAs exist. In addition to flamenco, a Piwi-specific piRNA cluster, traffic jam (tj), a large Maf gene, was determined as a new piRNA cluster. piRNAs arising from tj correspond to the untranslated regions of tj messenger RNA and are sense-oriented. piRNA loading on to Piwi may occur in the cytoplasm. zucchini, a gene encoding a putative cytoplasmic nuclease, is required for tj-derived piRNA production. In tj and piwi mutant ovaries, somatic cells fail to intermingle with germ cells and Fasciclin III is overexpressed. Loss of tj abolishes Piwi expression in gonadal somatic cells. Thus, in gonadal somatic cells, tj gives rise simultaneously to two different molecules: the TJ protein, which activates Piwi expression, and piRNAs, which define the Piwi targets for silencing.

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Year:  2009        PMID: 19812547     DOI: 10.1038/nature08501

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  30 in total

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Authors:  Gregory C Rogers; Stephen L Rogers; Tamara A Schwimmer; Stephanie C Ems-McClung; Claire E Walczak; Ronald D Vale; Jonathan M Scholey; David J Sharp
Journal:  Nature       Date:  2003-12-14       Impact factor: 49.962

2.  zucchini and squash encode two putative nucleases required for rasiRNA production in the Drosophila germline.

Authors:  Attilio Pane; Kristina Wehr; Trudi Schüpbach
Journal:  Dev Cell       Date:  2007-06       Impact factor: 12.270

Review 3.  On the road to reading the RNA-interference code.

Authors:  Haruhiko Siomi; Mikiko C Siomi
Journal:  Nature       Date:  2009-01-22       Impact factor: 49.962

4.  A slicer-mediated mechanism for repeat-associated siRNA 5' end formation in Drosophila.

Authors:  Lalith S Gunawardane; Kuniaki Saito; Kazumichi M Nishida; Keita Miyoshi; Yoshinori Kawamura; Tomoko Nagami; Haruhiko Siomi; Mikiko C Siomi
Journal:  Science       Date:  2007-02-22       Impact factor: 47.728

5.  Specialized piRNA pathways act in germline and somatic tissues of the Drosophila ovary.

Authors:  Colin D Malone; Julius Brennecke; Monica Dus; Alexander Stark; W Richard McCombie; Ravi Sachidanandam; Gregory J Hannon
Journal:  Cell       Date:  2009-04-23       Impact factor: 41.582

Review 6.  Multiple mechanisms and functions of maf transcription factors in the regulation of tissue-specific genes.

Authors:  Kohsuke Kataoka
Journal:  J Biochem       Date:  2007-06       Impact factor: 3.387

7.  An endogenous small interfering RNA pathway in Drosophila.

Authors:  Benjamin Czech; Colin D Malone; Rui Zhou; Alexander Stark; Catherine Schlingeheyde; Monica Dus; Norbert Perrimon; Manolis Kellis; James A Wohlschlegel; Ravi Sachidanandam; Gregory J Hannon; Julius Brennecke
Journal:  Nature       Date:  2008-05-07       Impact factor: 49.962

8.  Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila.

Authors:  Julius Brennecke; Alexei A Aravin; Alexander Stark; Monica Dus; Manolis Kellis; Ravi Sachidanandam; Gregory J Hannon
Journal:  Cell       Date:  2007-03-08       Impact factor: 41.582

9.  Aubergine encodes a Drosophila polar granule component required for pole cell formation and related to eIF2C.

Authors:  A N Harris; P M Macdonald
Journal:  Development       Date:  2001-07       Impact factor: 6.868

10.  The Functional RNA Database 3.0: databases to support mining and annotation of functional RNAs.

Authors:  Toutai Mituyama; Kouichirou Yamada; Emi Hattori; Hiroaki Okida; Yukiteru Ono; Goro Terai; Aya Yoshizawa; Takashi Komori; Kiyoshi Asai
Journal:  Nucleic Acids Res       Date:  2008-10-23       Impact factor: 16.971

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  221 in total

Review 1.  Molecular evolution of piRNA and transposon control pathways in Drosophila.

Authors:  C D Malone; G J Hannon
Journal:  Cold Spring Harb Symp Quant Biol       Date:  2010-05-07

2.  Drosophila Piwi functions downstream of piRNA production mediating a chromatin-based transposon silencing mechanism in female germ line.

Authors:  Sidney H Wang; Sarah C R Elgin
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-12       Impact factor: 11.205

3.  A role for transcription from a piRNA cluster in de novo piRNA production.

Authors:  Shinpei Kawaoka; Hiroshi Mitsutake; Takashi Kiuchi; Maki Kobayashi; Mayu Yoshikawa; Yutaka Suzuki; Sumio Sugano; Toru Shimada; Jun Kobayashi; Yukihide Tomari; Susumu Katsuma
Journal:  RNA       Date:  2011-12-22       Impact factor: 4.942

4.  Probing the initiation and effector phases of the somatic piRNA pathway in Drosophila.

Authors:  Astrid D Haase; Silvia Fenoglio; Felix Muerdter; Paloma M Guzzardo; Benjamin Czech; Darryl J Pappin; Caifu Chen; Assaf Gordon; Gregory J Hannon
Journal:  Genes Dev       Date:  2010-10-21       Impact factor: 11.361

5.  Targeting of P-Element Reporters to Heterochromatic Domains by Transposable Element 1360 in Drosophila melanogaster.

Authors:  Kathryn L Huisinga; Nicole C Riddle; Wilson Leung; Shachar Shimonovich; Stephen McDaniel; Alejandra Figueroa-Clarevega; Sarah C R Elgin
Journal:  Genetics       Date:  2015-12-17       Impact factor: 4.562

Review 6.  Roles for the lipid-signaling enzyme MitoPLD in mitochondrial dynamics, piRNA biogenesis, and spermatogenesis.

Authors:  Qun Gao; Michael A Frohman
Journal:  BMB Rep       Date:  2012-01       Impact factor: 4.778

Review 7.  Antiviral Immunity and Virus-Mediated Antagonism in Disease Vector Mosquitoes.

Authors:  Glady Hazitha Samuel; Zach N Adelman; Kevin M Myles
Journal:  Trends Microbiol       Date:  2018-01-31       Impact factor: 17.079

8.  Thawing, Culturing, and Cryopreserving Drosophila Cell Lines.

Authors:  Arthur Luhur; Kristin M Klueg; Johnny Roberts; Andrew C Zelhof
Journal:  J Vis Exp       Date:  2019-04-16       Impact factor: 1.355

Review 9.  Cell lines.

Authors:  Lucy Cherbas; Lei Gong
Journal:  Methods       Date:  2014-01-13       Impact factor: 3.608

10.  Functional involvement of Tudor and dPRMT5 in the piRNA processing pathway in Drosophila germlines.

Authors:  Kazumichi M Nishida; Tomoko N Okada; Takeshi Kawamura; Toutai Mituyama; Yoshinori Kawamura; Sachi Inagaki; Haidong Huang; Dahua Chen; Tatsuhiko Kodama; Haruhiko Siomi; Mikiko C Siomi
Journal:  EMBO J       Date:  2009-12-16       Impact factor: 11.598

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