Literature DB >> 20965259

Robust clustering of massive tractography datasets.

P Guevara1, C Poupon, D Rivière, Y Cointepas, M Descoteaux, B Thirion, J-F Mangin.   

Abstract

This paper presents a clustering method that detects the fiber bundles embedded in any MR-diffusion based tractography dataset. Our method can be seen as a compressing operation, capturing the most meaningful information enclosed in the fiber dataset. For the sake of efficiency, part of the analysis is based on clustering the white matter (WM) voxels rather than the fibers. The resulting regions of interest are used to define subset of fibers that are subdivided further into consistent bundles using a clustering of the fiber extremities. The dataset is reduced from more than one million fiber tracts to about two thousand fiber bundles. Validations are provided using simulated data and a physical phantom. We see our approach as a crucial preprocessing step before further analysis of huge fiber datasets. An important application will be the inference of detailed models of the subdivisions of white matter pathways and the mapping of the main U-fiber bundles.
Copyright © 2010 Elsevier Inc. All rights reserved.

Mesh:

Year:  2010        PMID: 20965259     DOI: 10.1016/j.neuroimage.2010.10.028

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  36 in total

1.  Multinomial probabilistic fiber representation for connectivity driven clustering.

Authors:  Birkan Tunç; Alex R Smith; Demian Wasserman; Xavier Pennec; William M Wells; Ragini Verma; Kilian M Pohl
Journal:  Inf Process Med Imaging       Date:  2013

2.  Fast Automatic Segmentation of White Matter Streamlines Based on a Multi-Subject Bundle Atlas.

Authors:  Nicole Labra; Pamela Guevara; Delphine Duclap; Josselin Houenou; Cyril Poupon; Jean-François Mangin; Miguel Figueroa
Journal:  Neuroinformatics       Date:  2017-01

3.  A hierarchical method for whole-brain connectivity-based parcellation.

Authors:  David Moreno-Dominguez; Alfred Anwander; Thomas R Knösche
Journal:  Hum Brain Mapp       Date:  2014-04-17       Impact factor: 5.038

4.  Framework for shape analysis of white matter fiber bundles.

Authors:  Tanya Glozman; Lisa Bruckert; Franco Pestilli; Derek W Yecies; Leonidas J Guibas; Kristen W Yeom
Journal:  Neuroimage       Date:  2017-12-02       Impact factor: 6.556

5.  HFPRM: Hierarchical Functional Principal Regression Model for Diffusion Tensor Image Bundle Statistics.

Authors:  Jingwen Zhang; Chao Huang; Joseph G Ibrahim; Shaili Jha; Rebecca C Knickmeyer; John H Gilmore; Martin Styner; Hongtu Zhu
Journal:  Inf Process Med Imaging       Date:  2017-05-23

6.  A volumetric conformal mapping approach for clustering white matter fibers in the brain.

Authors:  Vikash Gupta; Gautam Prasad; Paul Thompson
Journal:  Spectr Shape Anal Med Imaging (2016)       Date:  2016-12-11

7.  Degree-based statistic and center persistency for brain connectivity analysis.

Authors:  Kwangsun Yoo; Peter Lee; Moo K Chung; William S Sohn; Sun Ju Chung; Duk L Na; Daheen Ju; Yong Jeong
Journal:  Hum Brain Mapp       Date:  2016-09-04       Impact factor: 5.038

8.  A comparison of three fiber tract delineation methods and their impact on white matter analysis.

Authors:  Valerie J Sydnor; Ana María Rivas-Grajales; Amanda E Lyall; Fan Zhang; Sylvain Bouix; Sarina Karmacharya; Martha E Shenton; Carl-Fredrik Westin; Nikos Makris; Demian Wassermann; Lauren J O'Donnell; Marek Kubicki
Journal:  Neuroimage       Date:  2018-05-19       Impact factor: 6.556

9.  Mapping population-based structural connectomes.

Authors:  Zhengwu Zhang; Maxime Descoteaux; Jingwen Zhang; Gabriel Girard; Maxime Chamberland; David Dunson; Anuj Srivastava; Hongtu Zhu
Journal:  Neuroimage       Date:  2018-02-03       Impact factor: 6.556

10.  Automatic clustering and population analysis of white matter tracts using maximum density paths.

Authors:  Gautam Prasad; Shantanu H Joshi; Neda Jahanshad; Julio Villalon-Reina; Iman Aganj; Christophe Lenglet; Guillermo Sapiro; Katie L McMahon; Greig I de Zubicaray; Nicholas G Martin; Margaret J Wright; Arthur W Toga; Paul M Thompson
Journal:  Neuroimage       Date:  2014-04-18       Impact factor: 6.556

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.