Literature DB >> 28947871

HFPRM: Hierarchical Functional Principal Regression Model for Diffusion Tensor Image Bundle Statistics.

Jingwen Zhang1, Chao Huang1, Joseph G Ibrahim1, Shaili Jha2, Rebecca C Knickmeyer3, John H Gilmore3, Martin Styner3, Hongtu Zhu1,4.   

Abstract

Diffusion-weighted magnetic resonance imaging (MRI) provides a unique approach to understand the geometric structure of brain fiber bundles and to delineate the diffusion properties across subjects and time. It can be used to identify structural connectivity abnormalities and helps to diagnose brain-related disorders. The aim of this paper is to develop a novel, robust, and efficient dimensional reduction and regression framework, called hierarchical functional principal regression model (HFPRM), to effectively correlate high-dimensional fiber bundle statistics with a set of predictors of interest, such as age, diagnosis status, and genetic markers. The three key novelties of HFPRM include the simultaneous analysis of a large number of fiber bundles, the disentanglement of global and individual latent factors that characterizes between-tract correlation patterns, and a bi-level analysis on the predictor effects. Simulations are conducted to evaluate the finite sample performance of HFPRM. We have also applied HFPRM to a genome-wide association study to explore important genetic variants in neonatal white matter development.

Entities:  

Keywords:  Factor Analysis; Fiber Bundle Statistics; Functional Principal Component Analysis; Imaging Genetics; Varying Coefficient Model

Mesh:

Year:  2017        PMID: 28947871      PMCID: PMC5609856          DOI: 10.1007/978-3-319-59050-9_38

Source DB:  PubMed          Journal:  Inf Process Med Imaging        ISSN: 1011-2499


  23 in total

1.  Principal components analysis corrects for stratification in genome-wide association studies.

Authors:  Alkes L Price; Nick J Patterson; Robert M Plenge; Michael E Weinblatt; Nancy A Shadick; David Reich
Journal:  Nat Genet       Date:  2006-07-23       Impact factor: 38.330

Review 2.  Advances in functional and structural MR image analysis and implementation as FSL.

Authors:  Stephen M Smith; Mark Jenkinson; Mark W Woolrich; Christian F Beckmann; Timothy E J Behrens; Heidi Johansen-Berg; Peter R Bannister; Marilena De Luca; Ivana Drobnjak; David E Flitney; Rami K Niazy; James Saunders; John Vickers; Yongyue Zhang; Nicola De Stefano; J Michael Brady; Paul M Matthews
Journal:  Neuroimage       Date:  2004       Impact factor: 6.556

3.  Structure-specific statistical mapping of white matter tracts.

Authors:  Paul A Yushkevich; Hui Zhang; Tony J Simon; James C Gee
Journal:  Neuroimage       Date:  2008-01-26       Impact factor: 6.556

4.  Assessment of the early organization and maturation of infants' cerebral white matter fiber bundles: a feasibility study using quantitative diffusion tensor imaging and tractography.

Authors:  J Dubois; L Hertz-Pannier; G Dehaene-Lambertz; Y Cointepas; D Le Bihan
Journal:  Neuroimage       Date:  2006-01-18       Impact factor: 6.556

5.  Methodological considerations on tract-based spatial statistics (TBSS).

Authors:  Michael Bach; Frederik B Laun; Alexander Leemans; Chantal M W Tax; Geert J Biessels; Bram Stieltjes; Klaus H Maier-Hein
Journal:  Neuroimage       Date:  2014-06-16       Impact factor: 6.556

6.  The geometric structure of the brain fiber pathways.

Authors:  Van J Wedeen; Douglas L Rosene; Ruopeng Wang; Guangping Dai; Farzad Mortazavi; Patric Hagmann; Jon H Kaas; Wen-Yih I Tseng
Journal:  Science       Date:  2012-03-30       Impact factor: 47.728

7.  FADTTS: functional analysis of diffusion tensor tract statistics.

Authors:  Hongtu Zhu; Linglong Kong; Runze Li; Martin Styner; Guido Gerig; Weili Lin; John H Gilmore
Journal:  Neuroimage       Date:  2011-02-16       Impact factor: 6.556

8.  Tract-based morphometry for white matter group analysis.

Authors:  Lauren J O'Donnell; Carl-Fredrik Westin; Alexandra J Golby
Journal:  Neuroimage       Date:  2008-12-25       Impact factor: 6.556

Review 9.  FSL.

Authors:  Mark Jenkinson; Christian F Beckmann; Timothy E J Behrens; Mark W Woolrich; Stephen M Smith
Journal:  Neuroimage       Date:  2011-09-16       Impact factor: 6.556

10.  An integrated map of genetic variation from 1,092 human genomes.

Authors:  Goncalo R Abecasis; Adam Auton; Lisa D Brooks; Mark A DePristo; Richard M Durbin; Robert E Handsaker; Hyun Min Kang; Gabor T Marth; Gil A McVean
Journal:  Nature       Date:  2012-11-01       Impact factor: 49.962

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  1 in total

1.  Genome-Wide Association Analysis of Neonatal White Matter Microstructure.

Authors:  J Zhang; K Xia; M Ahn; S C Jha; R Blanchett; J J Crowley; J P Szatkiewicz; F Zou; H Zhu; M Styner; J H Gilmore; R C Knickmeyer
Journal:  Cereb Cortex       Date:  2021-01-05       Impact factor: 5.357

  1 in total

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