Warning: Undefined array key "mm" in /www/wwwroot/www.ai-bt.com/si.php on line 10 Deprecated: trim(): Passing null to parameter #1 ($string) of type string is deprecated in /www/wwwroot/www.ai-bt.com/si.php on line 10 Quantitative genetic interaction mapping using the E-MAP approach.

Literature DB >> 20946812

Quantitative genetic interaction mapping using the E-MAP approach.

Sean R Collins¹, Assen Roguev, Nevan J Krogan.

Abstract

Genetic interactions represent the degree to which the presence of one mutation modulates the phenotype of a second mutation. In recent years, approaches for measuring genetic interactions systematically and quantitatively have proven to be effective tools for unbiased characterization of gene function and have provided valuable data for analyses of evolution. Here, we present protocols for systematic measurement of genetic interactions with respect to organismal growth rate for two yeast species.

Entities: Chemical Disease Gene Species

Mesh：

Year: 2010 PMID： 20946812 PMCID： PMC2957675 DOI： 10.1016/S0076-6879(10)70009-4

Source DB: PubMed Journal: Methods Enzymol ISSN： 0076-6879 Impact factor: 1.600

36 in total

1. Global mapping of the yeast genetic interaction network.

Authors: Amy Hin Yan Tong; Guillaume Lesage; Gary D Bader; Huiming Ding; Hong Xu; Xiaofeng Xin; James Young; Gabriel F Berriz; Renee L Brost; Michael Chang; YiQun Chen; Xin Cheng; Gordon Chua; Helena Friesen; Debra S Goldberg; Jennifer Haynes; Christine Humphries; Grace He; Shamiza Hussein; Lizhu Ke; Nevan Krogan; Zhijian Li; Joshua N Levinson; Hong Lu; Patrice Ménard; Christella Munyana; Ainslie B Parsons; Owen Ryan; Raffi Tonikian; Tania Roberts; Anne-Marie Sdicu; Jesse Shapiro; Bilal Sheikh; Bernhard Suter; Sharyl L Wong; Lan V Zhang; Hongwei Zhu; Christopher G Burd; Sean Munro; Chris Sander; Jasper Rine; Jack Greenblatt; Matthias Peter; Anthony Bretscher; Graham Bell; Frederick P Roth; Grant W Brown; Brenda Andrews; Howard Bussey; Charles Boone
Journal: Science Date: 2004-02-06 Impact factor: 47.728

Review 2. Histone chaperones, a supporting role in the limelight.

Authors: Alejandra Loyola; Genevieve Almouzni
Journal: Biochim Biophys Acta Date: 2004-03-15

3. Synthetic genetic array analysis in Saccharomyces cerevisiae.

Authors: Amy Hin Yan Tong; Charles Boone
Journal: Methods Mol Biol Date: 2006

4. Exploration of the function and organization of the yeast early secretory pathway through an epistatic miniarray profile.

Authors: Maya Schuldiner; Sean R Collins; Natalie J Thompson; Vladimir Denic; Arunashree Bhamidipati; Thanuja Punna; Jan Ihmels; Brenda Andrews; Charles Boone; Jack F Greenblatt; Jonathan S Weissman; Nevan J Krogan
Journal: Cell Date: 2005-11-04 Impact factor: 41.582

5. Systematic genetic analysis with ordered arrays of yeast deletion mutants.

Authors: A H Tong; M Evangelista; A B Parsons; H Xu; G D Bader; N Pagé; M Robinson; S Raghibizadeh; C W Hogue; H Bussey; B Andrews; M Tyers; C Boone
Journal: Science Date: 2001-12-14 Impact factor: 47.728

Review 6. Synthetic enhancement in gene interaction: a genetic tool come of age.

Authors: L Guarente
Journal: Trends Genet Date: 1993-10 Impact factor: 11.639

7. Histone H3 methylation by Set2 directs deacetylation of coding regions by Rpd3S to suppress spurious intragenic transcription.

Authors: Michael J Carrozza; Bing Li; Laurence Florens; Tamaki Suganuma; Selene K Swanson; Kenneth K Lee; Wei-Jong Shia; Scott Anderson; John Yates; Michael P Washburn; Jerry L Workman
Journal: Cell Date: 2005-11-18 Impact factor: 41.582

8. A robust toolkit for functional profiling of the yeast genome.

Authors: Xuewen Pan; Daniel S Yuan; Dong Xiang; Xiaoling Wang; Sharon Sookhai-Mahadeo; Joel S Bader; Philip Hieter; Forrest Spencer; Jef D Boeke
Journal: Mol Cell Date: 2004-11-05 Impact factor: 17.970

9. Distinct sets of SEC genes govern transport vesicle formation and fusion early in the secretory pathway.

Authors: C A Kaiser; R Schekman
Journal: Cell Date: 1990-05-18 Impact factor: 41.582

10. An ER-mitochondria tethering complex revealed by a synthetic biology screen.

Authors: Benoît Kornmann; Erin Currie; Sean R Collins; Maya Schuldiner; Jodi Nunnari; Jonathan S Weissman; Peter Walter
Journal: Science Date: 2009-06-25 Impact factor: 47.728

58 in total

1. Key functional regions in the histone variant H2A.Z C-terminal docking domain.

Authors: Alice Y Wang; Maria J Aristizabal; Colm Ryan; Nevan J Krogan; Michael S Kobor
Journal: Mol Cell Biol Date: 2011-07-26 Impact factor: 4.272

Review 2. Single-cell and multivariate approaches in genetic perturbation screens.

Authors: Prisca Liberali; Berend Snijder; Lucas Pelkmans
Journal: Nat Rev Genet Date: 2014-12-02 Impact factor: 53.242

Review 3. Systems genetics in "-omics" era: current and future development.

Authors: Hong Li
Journal: Theory Biosci Date: 2012-11-09 Impact factor: 1.919

4. Set5 and Set1 cooperate to repress gene expression at telomeres and retrotransposons.

Authors: Glòria Mas Martín; Devin A King; Erin M Green; Pablo E Garcia-Nieto; Richard Alexander; Sean R Collins; Nevan J Krogan; Or P Gozani; Ashby J Morrison
Journal: Epigenetics Date: 2014-01-17 Impact factor: 4.528

5. Combined Action of Histone Reader Modules Regulates NuA4 Local Acetyltransferase Function but Not Its Recruitment on the Genome.

Authors: Anne-Lise Steunou; Myriam Cramet; Dorine Rossetto; Maria J Aristizabal; Nicolas Lacoste; Simon Drouin; Valérie Côté; Eric Paquet; Rhea T Utley; Nevan Krogan; François Robert; Michael S Kobor; Jacques Côté
Journal: Mol Cell Biol Date: 2016-10-28 Impact factor: 4.272