Literature DB >> 20938774

Cloning and functional characterization of a novel endo-β-1,4-glucanase gene from a soil-derived metagenomic library.

Juan Liu1, Wei-Dong Liu, Xiao-Li Zhao, Wen-Jing Shen, Hui Cao, Zhong-Li Cui.   

Abstract

A metagenomic library consisting of 3,024 bacterial artificial chromosome clones was prepared in Escherichia coli DH10B with high-molecular-weight DNA extracted from red soil in South China. A novel cellulase gene with an open reading frame of 1,332 bp, cel5G, encoding an endo-β-1,4-glucanase was cloned using an activity-based screen. The deduced enzyme, Cel5G, belongs to the glycosyl hydrolase family 5 and shares <39% identity with endoglucanases in the GenBank database. cel5G was expressed in E. coli BL21, and the recombinant enzyme Cel5G was purified to homogeneity for enzymatic analysis. Cel5G hydrolyzed a wide range of β-1,4-, β-1,3/β-1,4-, or β-1,3/β-1,6-linked polysaccharides, amorphous cellulose, filter paper, and microcrystalline cellulose. Its highest activity was in 50 mM citrate buffer, pH 4.8, at 50°C. Cel5G is stable over a wide range of pH values (from 2.0 to 10.6) and is thermally stable under 60°C. It is highly tolerant and active in high salt concentrations and is stable in the presence of pepsin and pancreatin. The K (m) and V (max) values of Cel5G for carboxymethyl cellulose are 19.92 mg/ml and 1,941 μmol  min(-1) mg(-1), respectively. These characteristics indicate that Cel5G has potential for industrial use.

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Year:  2010        PMID: 20938774     DOI: 10.1007/s00253-010-2828-4

Source DB:  PubMed          Journal:  Appl Microbiol Biotechnol        ISSN: 0175-7598            Impact factor:   4.813


  18 in total

1.  Identification and characterization of a multidomain hyperthermophilic cellulase from an archaeal enrichment.

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Journal:  Nat Commun       Date:  2011-07-05       Impact factor: 14.919

2.  Direct amplification of new cellulase genes from woodland soil purified DNA.

Authors:  Marco Cucurachi; Matteo Busconi; Mariangela Marudelli; Giovanna Soffritti; Corrado Fogher
Journal:  Mol Biol Rep       Date:  2013-05-05       Impact factor: 2.316

3.  Diversity of Microbial Carbohydrate-Active enZYmes (CAZYmes) Associated with Freshwater and Soil Samples from Caatinga Biome.

Authors:  Ana Camila Andrade; Adriana Fróes; Fabyano Álvares Cardoso Lopes; Fabiano L Thompson; Ricardo Henrique Krüger; Elizabeth Dinsdale; Thiago Bruce
Journal:  Microb Ecol       Date:  2017-01-09       Impact factor: 4.552

4.  Identification and characterization of a halotolerant, cold-active marine endo-β-1,4-glucanase by using functional metagenomics of seaweed-associated microbiota.

Authors:  Marjolaine Martin; Sophie Biver; Sébastien Steels; Tristan Barbeyron; Murielle Jam; Daniel Portetelle; Gurvan Michel; Micheline Vandenbol
Journal:  Appl Environ Microbiol       Date:  2014-06-06       Impact factor: 4.792

5.  Transglycosylation, a new role for multifunctional cellulase in overcoming product inhibition during the cellulose hydrolysis.

Authors:  Xu Wang; Yanbo Wu; Yu Zhou
Journal:  Bioengineered       Date:  2016-07-28       Impact factor: 3.269

6.  Bifunctional recombinant cellulase-xylanase (rBhcell-xyl) from the polyextremophilic bacterium Bacillus halodurans TSLV1 and its utility in valorization of renewable agro-residues.

Authors:  Gurdeep Rattu; Swati Joshi; T Satyanarayana
Journal:  Extremophiles       Date:  2016-08-24       Impact factor: 2.395

7.  CenC, a multidomain thermostable GH9 processive endoglucanase from Clostridium thermocellum: cloning, characterization and saccharification studies.

Authors:  Ikram ul Haq; Fatima Akram; Mahmood Ali Khan; Zahid Hussain; Ali Nawaz; Kaleem Iqbal; Ali Javed Shah
Journal:  World J Microbiol Biotechnol       Date:  2015-08-07       Impact factor: 3.312

8.  Identification and characterization of novel cellulolytic and hemicellulolytic genes and enzymes derived from German grassland soil metagenomes.

Authors:  Heiko Nacke; Martin Engelhaupt; Silja Brady; Christiane Fischer; Janine Tautzt; Rolf Daniel
Journal:  Biotechnol Lett       Date:  2011-12-21       Impact factor: 2.461

Review 9.  Bioprospecting potential of the soil metagenome: novel enzymes and bioactivities.

Authors:  Myung Hwan Lee; Seon-Woo Lee
Journal:  Genomics Inform       Date:  2013-09-30

10.  Streptomyces misionensis PESB-25 produces a thermoacidophilic endoglucanase using sugarcane bagasse and corn steep liquor as the sole organic substrates.

Authors:  Marcella Novaes Franco-Cirigliano; Raquel de Carvalho Rezende; Mônica Pires Gravina-Oliveira; Pedro Henrique Freitas Pereira; Rodrigo Pires do Nascimento; Elba Pinto da Silva Bon; Andrew Macrae; Rosalie Reed Rodrigues Coelho
Journal:  Biomed Res Int       Date:  2013-03-24       Impact factor: 3.411

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