Literature DB >> 20934870

Simplicity and complexity in the cyanobacterial circadian clock mechanism.

Guogang Dong1, Yong-Ick Kim, Susan S Golden.   

Abstract

The circadian clock of the cyanobacterium Synechococcus elongatus PCC 7942 is built on a three-protein central oscillator that can be reconstituted in vitro, a redox-sensitive input for synchronization with the environment, and a bacterial two-component signal transduction pathway for global transcriptional regulation. This review covers the most recent progress in our understanding of the biological and biochemical mechanism of this bacterial clock, such as the discovery of a quinone-binding activity of the oscillator protein KaiA, the molecular mechanism of circadian control of cell division, and the global control of gene expression via modulation of DNA topology.
Copyright © 2010 Elsevier Ltd. All rights reserved.

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Year:  2010        PMID: 20934870      PMCID: PMC2982900          DOI: 10.1016/j.gde.2010.09.002

Source DB:  PubMed          Journal:  Curr Opin Genet Dev        ISSN: 0959-437X            Impact factor:   5.578


  59 in total

1.  Visualizing a circadian clock protein: crystal structure of KaiC and functional insights.

Authors:  Rekha Pattanayek; Jimin Wang; Tetsuya Mori; Yao Xu; Carl Hirschie Johnson; Martin Egli
Journal:  Mol Cell       Date:  2004-08-13       Impact factor: 17.970

2.  LdpA: a component of the circadian clock senses redox state of the cell.

Authors:  Natalia B Ivleva; Matthew R Bramlett; Paul A Lindahl; Susan S Golden
Journal:  EMBO J       Date:  2005-03-10       Impact factor: 11.598

3.  Circadian Rhythm of the Prokaryote Synechococcus sp. RF-1.

Authors:  T C Huang; J Tu; T J Chow; T H Chen
Journal:  Plant Physiol       Date:  1990-02       Impact factor: 8.340

4.  A sequential program of dual phosphorylation of KaiC as a basis for circadian rhythm in cyanobacteria.

Authors:  Taeko Nishiwaki; Yoshinori Satomi; Yohko Kitayama; Kazuki Terauchi; Reiko Kiyohara; Toshifumi Takao; Takao Kondo
Journal:  EMBO J       Date:  2007-08-23       Impact factor: 11.598

5.  Three major output pathways from the KaiABC-based oscillator cooperate to generate robust circadian kaiBC expression in cyanobacteria.

Authors:  Yasuhito Taniguchi; Naoki Takai; Mitsunori Katayama; Takao Kondo; Tokitaka Oyama
Journal:  Proc Natl Acad Sci U S A       Date:  2010-01-28       Impact factor: 11.205

6.  A period-extender gene, pex, that extends the period of the circadian clock in the cyanobacterium Synechococcus sp. strain PCC 7942.

Authors:  S Kutsuna; T Kondo; S Aoki; M Ishiura
Journal:  J Bacteriol       Date:  1998-04       Impact factor: 3.490

7.  Circadian expression of the dnaK gene in the cyanobacterium Synechocystis sp. strain PCC 6803.

Authors:  S Aoki; T Kondo; M Ishiura
Journal:  J Bacteriol       Date:  1995-10       Impact factor: 3.490

8.  Identification of phosphorylation sites in the repetitive carboxyl-terminal domain of the mouse RNA polymerase II largest subunit.

Authors:  J Zhang; J L Corden
Journal:  J Biol Chem       Date:  1991-02-05       Impact factor: 5.157

9.  Effect of continuous light on diurnal rhythms in Cyanothece sp. ATCC 51142.

Authors:  Thanura Elvitigala; Jana Stöckel; Bijoy K Ghosh; Himadri B Pakrasi
Journal:  BMC Genomics       Date:  2009-05-15       Impact factor: 3.969

10.  Intramolecular regulation of phosphorylation status of the circadian clock protein KaiC.

Authors:  Yao Xu; Tetsuya Mori; Ximing Qin; Heping Yan; Martin Egli; Carl Hirschie Johnson
Journal:  PLoS One       Date:  2009-11-25       Impact factor: 3.240

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  17 in total

Review 1.  Circadian mRNA expression: insights from modeling and transcriptomics.

Authors:  Sarah Lück; Pål O Westermark
Journal:  Cell Mol Life Sci       Date:  2015-10-26       Impact factor: 9.261

2.  Time-based patterning in development: The role of oscillating gene expression.

Authors:  Miguel A Moreno-Risueno; Philip N Benfey
Journal:  Transcription       Date:  2011-05

Review 3.  Temporal and spatial oscillations in bacteria.

Authors:  Peter Lenz; Lotte Søgaard-Andersen
Journal:  Nat Rev Microbiol       Date:  2011-08-15       Impact factor: 60.633

4.  The circadian oscillator in Synechococcus elongatus controls metabolite partitioning during diurnal growth.

Authors:  Spencer Diamond; Darae Jun; Benjamin E Rubin; Susan S Golden
Journal:  Proc Natl Acad Sci U S A       Date:  2015-03-30       Impact factor: 11.205

5.  Sequence determinants of circadian gene expression phase in cyanobacteria.

Authors:  Vikram Vijayan; Erin K O'Shea
Journal:  J Bacteriol       Date:  2012-11-30       Impact factor: 3.490

6.  Insight into cyanobacterial circadian timing from structural details of the KaiB-KaiC interaction.

Authors:  Joost Snijder; Rebecca J Burnley; Anika Wiegard; Adrien S J Melquiond; Alexandre M J J Bonvin; Ilka M Axmann; Albert J R Heck
Journal:  Proc Natl Acad Sci U S A       Date:  2014-01-13       Impact factor: 11.205

Review 7.  Breast cancer and circadian disruption from electric lighting in the modern world.

Authors:  Richard G Stevens; George C Brainard; David E Blask; Steven W Lockley; Mario E Motta
Journal:  CA Cancer J Clin       Date:  2013-12-24       Impact factor: 508.702

8.  Circadian rhythms. A protein fold switch joins the circadian oscillator to clock output in cyanobacteria.

Authors:  Yong-Gang Chang; Susan E Cohen; Connie Phong; William K Myers; Yong-Ick Kim; Roger Tseng; Jenny Lin; Li Zhang; Joseph S Boyd; Yvonne Lee; Shannon Kang; David Lee; Sheng Li; R David Britt; Michael J Rust; Susan S Golden; Andy LiWang
Journal:  Science       Date:  2015-06-25       Impact factor: 47.728

9.  Intrinsic negative feedback governs activation surge in two-component regulatory systems.

Authors:  Won-Sik Yeo; Igor Zwir; Henry V Huang; Dongwoo Shin; Akinori Kato; Eduardo A Groisman
Journal:  Mol Cell       Date:  2012-02-10       Impact factor: 17.970

10.  Quantifying the rhythm of KaiB-C interaction for in vitro cyanobacterial circadian clock.

Authors:  Lan Ma; Rama Ranganathan
Journal:  PLoS One       Date:  2012-08-10       Impact factor: 3.240

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