Literature DB >> 20889125

Histone methyl transferases and demethylases; can they link metabolism and transcription?

Raffaele Teperino1, Kristina Schoonjans1, Johan Auwerx2.   

Abstract

Heritable changes to the transcriptome that are independent to changes in the genome are defined as epigenetics. DNA methylation and posttranslational modifications of histones, such as acetylation/deacetylation and methylation/demethylation of lysine residues, underlie these epigenetic phenomena, which impact on many physiological processes. This perspective focuses on the emerging biology of histone methylation and demethylation, highlighting how these reactions depend on metabolic coenzymes like S-adenosylmethionine, flavin adenine dinucleotide, and α-ketoglutarate. Furthermore, we illustrate that methyltranferases and demethylases affect many metabolic pathways. Despite the preliminary evidence that methyltranferases and demethylases could link metabolic signals to chromatin and alter transcription, further research is indispensable to consolidate these enticing observations.
Copyright © 2010 Elsevier Inc. All rights reserved.

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Year:  2010        PMID: 20889125      PMCID: PMC3642811          DOI: 10.1016/j.cmet.2010.09.004

Source DB:  PubMed          Journal:  Cell Metab        ISSN: 1550-4131            Impact factor:   27.287


  55 in total

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Journal:  Genes Dev       Date:  2006-06-01       Impact factor: 11.361

Review 2.  Rheostat control of gene expression by metabolites.

Authors:  Andreas G Ladurner
Journal:  Mol Cell       Date:  2006-10-06       Impact factor: 17.970

3.  Activation of nuclear receptor coactivator PGC-1alpha by arginine methylation.

Authors:  Catherine Teyssier; Han Ma; Roger Emter; Anastasia Kralli; Michael R Stallcup
Journal:  Genes Dev       Date:  2005-06-15       Impact factor: 11.361

4.  Histone demethylation by a family of JmjC domain-containing proteins.

Authors:  Yu-ichi Tsukada; Jia Fang; Hediye Erdjument-Bromage; Maria E Warren; Christoph H Borchers; Paul Tempst; Yi Zhang
Journal:  Nature       Date:  2005-12-18       Impact factor: 49.962

5.  G9a and Glp methylate lysine 373 in the tumor suppressor p53.

Authors:  Jing Huang; Jean Dorsey; Sergei Chuikov; Laura Pérez-Burgos; Xinyue Zhang; Thomas Jenuwein; Danny Reinberg; Shelley L Berger
Journal:  J Biol Chem       Date:  2010-01-29       Impact factor: 5.157

Review 6.  Mixed lineage leukemia: roles in gene expression, hormone signaling and mRNA processing.

Authors:  Khairul I Ansari; Subhrangsu S Mandal
Journal:  FEBS J       Date:  2010-03-04       Impact factor: 5.542

Review 7.  The mammalian epigenome.

Authors:  Bradley E Bernstein; Alexander Meissner; Eric S Lander
Journal:  Cell       Date:  2007-02-23       Impact factor: 41.582

8.  Histone demethylation mediated by the nuclear amine oxidase homolog LSD1.

Authors:  Yujiang Shi; Fei Lan; Caitlin Matson; Peter Mulligan; Johnathan R Whetstine; Philip A Cole; Robert A Casero; Yang Shi
Journal:  Cell       Date:  2004-12-29       Impact factor: 41.582

9.  LSD1 demethylates repressive histone marks to promote androgen-receptor-dependent transcription.

Authors:  Eric Metzger; Melanie Wissmann; Na Yin; Judith M Müller; Robert Schneider; Antoine H F M Peters; Thomas Günther; Reinhard Buettner; Roland Schüle
Journal:  Nature       Date:  2005-08-03       Impact factor: 49.962

10.  Histone H3 lysine 9 methylation and HP1gamma are associated with transcription elongation through mammalian chromatin.

Authors:  Christopher R Vakoc; Sean A Mandat; Benjamin A Olenchock; Gerd A Blobel
Journal:  Mol Cell       Date:  2005-08-05       Impact factor: 17.970

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  118 in total

Review 1.  Sirtuins mediate mammalian metabolic responses to nutrient availability.

Authors:  Angeliki Chalkiadaki; Leonard Guarente
Journal:  Nat Rev Endocrinol       Date:  2012-01-17       Impact factor: 43.330

Review 2.  Metabolism strikes back: metabolic flux regulates cell signaling.

Authors:  Christian M Metallo; Matthew G Vander Heiden
Journal:  Genes Dev       Date:  2010-12-15       Impact factor: 11.361

Review 3.  Role of epigenetic aberrations in the development and progression of human hepatocellular carcinoma.

Authors:  Igor P Pogribny; Ivan Rusyn
Journal:  Cancer Lett       Date:  2012-02-02       Impact factor: 8.679

4.  Tissue nonautonomous effects of fat body methionine metabolism on imaginal disc repair in Drosophila.

Authors:  Soshiro Kashio; Fumiaki Obata; Liu Zhang; Tomonori Katsuyama; Takahiro Chihara; Masayuki Miura
Journal:  Proc Natl Acad Sci U S A       Date:  2016-02-01       Impact factor: 11.205

Review 5.  Nutritional models of foetal programming and nutrigenomic and epigenomic dysregulations of fatty acid metabolism in the liver and heart.

Authors:  Jean-Louis Guéant; Rania Elakoum; Olivier Ziegler; David Coelho; Eva Feigerlova; Jean-Luc Daval; Rosa-Maria Guéant-Rodriguez
Journal:  Pflugers Arch       Date:  2013-09-03       Impact factor: 3.657

6.  Histone methylation has dynamics distinct from those of histone acetylation in cell cycle reentry from quiescence.

Authors:  Philipp Mews; Barry M Zee; Sherry Liu; Greg Donahue; Benjamin A Garcia; Shelley L Berger
Journal:  Mol Cell Biol       Date:  2014-08-25       Impact factor: 4.272

7.  mTOR trains heightened macrophage responses.

Authors:  Tiffany Horng
Journal:  Trends Immunol       Date:  2014-12-02       Impact factor: 16.687

8.  Epigenetic modification of Sod2 in the development of diabetic retinopathy and in the metabolic memory: role of histone methylation.

Authors:  Qing Zhong; Renu A Kowluru
Journal:  Invest Ophthalmol Vis Sci       Date:  2013-01-14       Impact factor: 4.799

9.  Alpha ketoglutarate levels, regulated by p53 and OGDH, determine autophagy and cell fate/apoptosis in response to Nutlin-3a.

Authors:  Lei Duan; Ricardo E Perez; Carl G Maki
Journal:  Cancer Biol Ther       Date:  2018-10-05       Impact factor: 4.742

Review 10.  Metabolic Signaling to Chromatin.

Authors:  Shelley L Berger; Paolo Sassone-Corsi
Journal:  Cold Spring Harb Perspect Biol       Date:  2016-11-01       Impact factor: 10.005

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