Literature DB >> 21392573

The Naegleria genome: a free-living microbial eukaryote lends unique insights into core eukaryotic cell biology.

Lillian K Fritz-Laylin1, Michael L Ginger, Charles Walsh, Scott C Dawson, Chandler Fulton.   

Abstract

Naegleria gruberi, a free-living protist, has long been treasured as a model for basal body and flagellar assembly due to its ability to differentiate from crawling amoebae into swimming flagellates. The full genome sequence of Naegleria gruberi has recently been used to estimate gene families ancestral to all eukaryotes and to identify novel aspects of Naegleria biology, including likely facultative anaerobic metabolism, extensive signaling cascades, and evidence for sexuality. Distinctive features of the Naegleria genome and nuclear biology provide unique perspectives for comparative cell biology, including cell division, RNA processing and nucleolar assembly. We highlight here exciting new and novel aspects of Naegleria biology identified through genomic analysis.
Copyright © 2011 Institut Pasteur. Published by Elsevier SAS. All rights reserved.

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Year:  2011        PMID: 21392573      PMCID: PMC4929615          DOI: 10.1016/j.resmic.2011.03.003

Source DB:  PubMed          Journal:  Res Microbiol        ISSN: 0923-2508            Impact factor:   3.992


  81 in total

1.  Sawyeria marylandensis (Heterolobosea) has a hydrogenosome with novel metabolic properties.

Authors:  Maria José Barberà; Iñaki Ruiz-Trillo; Julia Y A Tufts; Amandine Bery; Jeffrey D Silberman; Andrew J Roger
Journal:  Eukaryot Cell       Date:  2010-10-29

2.  Unusual mitochondrial genome structures throughout the Euglenozoa.

Authors:  Joannie Roy; Drahomíra Faktorová; Julius Lukes; Gertraud Burger
Journal:  Protist       Date:  2007-05-11

Review 3.  Organization and expression of organellar genomes.

Authors:  Adrian C Barbrook; Christopher J Howe; Davy P Kurniawan; Sarah J Tarr
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-03-12       Impact factor: 6.237

4.  RNA editing and mitochondrial genomic organization in the cryptobiid kinetoplastid protozoan Trypanoplasma borreli.

Authors:  D A Maslov; L Simpson
Journal:  Mol Cell Biol       Date:  1994-12       Impact factor: 4.272

5.  Programmed appearance of translatable flagellar tubulin mRNA during cell differentiation in Naegleria.

Authors:  E Y Lai; C Walsh; D Wardell; C Fulton
Journal:  Cell       Date:  1979-08       Impact factor: 41.582

Review 6.  Pathogenic and opportunistic free-living amoebae: Acanthamoeba spp., Balamuthia mandrillaris, Naegleria fowleri, and Sappinia diploidea.

Authors:  Govinda S Visvesvara; Hercules Moura; Frederick L Schuster
Journal:  FEMS Immunol Med Microbiol       Date:  2007-04-11

7.  I-NjaI, a nuclear intron-encoded homing endonuclease from Naegleria, generates a pentanucleotide 3' cleavage-overhang within a 19 base-pair partially symmetric DNA recognition site.

Authors:  M Elde; P Haugen; N P Willassen; S Johansen
Journal:  Eur J Biochem       Date:  1999-01

8.  Trypanosoma cruzi mitochondrial maxicircles display species- and strain-specific variation and a conserved element in the non-coding region.

Authors:  Scott J Westenberger; Gustavo C Cerqueira; Najib M El-Sayed; Bianca Zingales; David A Campbell; Nancy R Sturm
Journal:  BMC Genomics       Date:  2006-03-22       Impact factor: 3.969

9.  Basal bodies, but not centrioles, in Naegleria.

Authors:  C Fulton; A D Dingle
Journal:  J Cell Biol       Date:  1971-12       Impact factor: 10.539

10.  Broadly sampled multigene trees of eukaryotes.

Authors:  Hwan Su Yoon; Jessica Grant; Yonas I Tekle; Min Wu; Benjamin C Chaon; Jeffrey C Cole; John M Logsdon; David J Patterson; Debashish Bhattacharya; Laura A Katz
Journal:  BMC Evol Biol       Date:  2008-01-18       Impact factor: 3.260

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  20 in total

Review 1.  K₂p channels in plants and animals.

Authors:  Wendy González; Braulio Valdebenito; Julio Caballero; Gonzalo Riadi; Janin Riedelsberger; Gonzalo Martínez; David Ramírez; Leandro Zúñiga; Francisco V Sepúlveda; Ingo Dreyer; Michael Janta; Dirk Becker
Journal:  Pflugers Arch       Date:  2014-11-06       Impact factor: 3.657

2.  A new piece of the eukaryotic puzzle.

Authors:  Alejandro Sanchez-Flores
Journal:  Nat Rev Microbiol       Date:  2011-10-14       Impact factor: 60.633

3.  Ubiquitin-like Atg8 protein is expressed during autophagy and the encystation process in Naegleria gruberi.

Authors:  Roberto Cárdenas-Zúñiga; Virginia Sánchez-Monroy; Rosa María Bermúdez-Cruz; Mario Alberto Rodríguez; Jesús Serrano-Luna; Mineko Shibayama
Journal:  Parasitol Res       Date:  2016-10-28       Impact factor: 2.289

4.  Nf-GH, a glycosidase secreted by Naegleria fowleri, causes mucin degradation: an in vitro and in vivo study.

Authors:  Moisés Martínez-Castillo; Rosa Elena Cárdenas-Guerra; Rossana Arroyo; Anjan Debnath; Mario Alberto Rodríguez; Myrna Sabanero; Fernando Flores-Sánchez; Fernando Navarro-Garcia; Jesús Serrano-Luna; Mineko Shibayama
Journal:  Future Microbiol       Date:  2017-06-13       Impact factor: 3.165

5.  The mitochondrial genome and a 60-kb nuclear DNA segment from Naegleria fowleri, the causative agent of primary amoebic meningoencephalitis.

Authors:  Emily K Herman; Alexander L Greninger; Govinda S Visvesvara; Francine Marciano-Cabral; Joel B Dacks; Charles Y Chiu
Journal:  J Eukaryot Microbiol       Date:  2013-01-29       Impact factor: 3.346

6.  Naegleria fowleri after 50 years: is it a neglected pathogen?

Authors:  Moisés Martínez-Castillo; Roberto Cárdenas-Zúñiga; Daniel Coronado-Velázquez; Anjan Debnath; Jesús Serrano-Luna; Mineko Shibayama
Journal:  J Med Microbiol       Date:  2016-07-04       Impact factor: 2.472

Review 7.  Evolution: functional evolution of nuclear structure.

Authors:  Katherine L Wilson; Scott C Dawson
Journal:  J Cell Biol       Date:  2011-10-17       Impact factor: 10.539

8.  Gene content evolution in Discobid mitochondria deduced from the phylogenetic position and complete mitochondrial genome of Tsukubamonas globosa.

Authors:  Ryoma Kamikawa; Martin Kolisko; Yuki Nishimura; Akinori Yabuki; Matthew W Brown; Sohta A Ishikawa; Ken-ichiro Ishida; Andrew J Roger; Tetsuo Hashimoto; Yuji Inagaki
Journal:  Genome Biol Evol       Date:  2014-02       Impact factor: 3.416

9.  A nonmitochondrial hydrogen production in Naegleria gruberi.

Authors:  Anastasios D Tsaousis; Eva Nyvltová; Robert Sutak; Ivan Hrdy; Jan Tachezy
Journal:  Genome Biol Evol       Date:  2014-04       Impact factor: 3.416

Review 10.  Evolution of glutamatergic signaling and synapses.

Authors:  Leonid L Moroz; Mikhail A Nikitin; Pavlin G Poličar; Andrea B Kohn; Daria Y Romanova
Journal:  Neuropharmacology       Date:  2021-07-31       Impact factor: 5.273

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