Literature DB >> 20862439

Fluorescent nucleoside analogue displays enhanced emission upon pairing with guanine.

Yun Xie1, Tucker Maxson, Yitzhak Tor.   

Abstract

A fluorescent nucleobase analogue, 7-aminoquinazoline-2,4-(1H,3H)-dione, is incorporated into a DNA oligonucleotide and senses mismatched pairing by displaying G-specific fluorescence enhancement.

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Year:  2010        PMID： 20862439      PMCID： PMC3032630          DOI： 10.1039/c0ob00413h

Source DB:  PubMed          Journal:  Org Biomol Chem        ISSN： 1477-0520            Impact factor:   3.876


  31 in total

1.  PRODAN-conjugated DNA: synthesis and photochemical properties.

Authors:  Kazuki Tainaka; Kazuo Tanaka; Shuji Ikeda; Ken-ichiro Nishiza; Tomo Unzai; Yoshimasa Fujiwara; Isao Saito; Akimitsu Okamoto
Journal:  J Am Chem Soc       Date:  2007-03-23       Impact factor: 15.419

2.  Design of a novel G-quenched molecular beacon: a simple and efficient strategy for DNA sequence analysis.

Authors:  Yoshio Saito; Erika Mizuno; Subhendu Sekhar Bag; Isamu Suzuka; Isao Saito
Journal:  Chem Commun (Camb)       Date:  2007-08-29       Impact factor: 6.222

3.  2'-N-(pyren-1-yl)acetyl-2'-amino-alpha-L-LNA: synthesis and detection of single nucleotide mismatches in DNA and RNA targets.

Authors:  T Santhosh Kumar; Jesper Wengel; Patrick J Hrdlicka
Journal:  Chembiochem       Date:  2007-07-09       Impact factor: 3.164

Review 4.  Fluorescent analogs of biomolecular building blocks: design, properties, and applications.

Authors:  Renatus W Sinkeldam; Nicholas J Greco; Yitzhak Tor
Journal:  Chem Rev       Date:  2010-05-12       Impact factor: 60.622

Review 5.  The use of single-nucleotide polymorphism maps in pharmacogenomics.

Authors:  J J McCarthy; R Hilfiker
Journal:  Nat Biotechnol       Date:  2000-05       Impact factor: 54.908

6.  Fluorescein-labeled oligonucleotides for real-time pcr: using the inherent quenching of deoxyguanosine nucleotides.

Authors:  A O Crockett; C T Wittwer
Journal:  Anal Biochem       Date:  2001-03-01       Impact factor: 3.365

7.  Allele specific C-bulge probes with one unique fluorescent molecule discriminate the single nucleotide polymorphism in DNA.

Authors:  Fumie Takei; Hitoshi Suda; Masaki Hagihara; Jinhua Zhang; Akio Kobori; Kazuhiko Nakatani
Journal:  Chemistry       Date:  2007       Impact factor: 5.236

8.  A highly fluorescent nucleoside analog based on thieno[3,4-d]pyrimidine senses mismatched pairing.

Authors:  Seergazhi G Srivatsan; Haim Weizman; Yitzhak Tor
Journal:  Org Biomol Chem       Date:  2008-03-10       Impact factor: 3.876

Review 9.  SNPing in the human genome.

Authors:  C S Carlson; T L Newman; D A Nickerson
Journal:  Curr Opin Chem Biol       Date:  2001-02       Impact factor: 8.822

10.  Fluorescence properties of pyrimidopyrimidoindole nucleoside dC(PPI) incorporated into oligodeoxynucleotides.

Authors:  Masahiro Mizuta; Kohji Seio; Akihiro Ohkubo; Mitsuo Sekine
Journal:  J Phys Chem B       Date:  2009-07-16       Impact factor: 2.991
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  8 in total

1.  Fluorescence Turn-On Sensing of DNA Duplex Formation by a Tricyclic Cytidine Analogue.

Authors:  Dillon D Burns; Kristine L Teppang; Raymond W Lee; Melissa E Lokensgard; Byron W Purse
Journal:  J Am Chem Soc       Date:  2017-01-20       Impact factor: 15.419

2.  Two-photon-induced fluorescence of isomorphic nucleobase analogs.

Authors:  Richard S K Lane; Rosemary Jones; Renatus W Sinkeldam; Yitzhak Tor; Steven W Magennis
Journal:  Chemphyschem       Date:  2014-03-06       Impact factor: 3.102

3.  Oligodeoxynucleotides containing multiple thiophene-modified isomorphic fluorescent nucleosides.

Authors:  Mary S Noé; Renatus W Sinkeldam; Yitzhak Tor
Journal:  J Org Chem       Date:  2013-08-05       Impact factor: 4.354

4.  Synthesis and optical behaviors of 6-seleno-deoxyguanosine.

Authors:  Kaur Manindar; Huang Zhen
Journal:  Sci China Chem       Date:  2014-02-01       Impact factor: 9.445

5.  A highly fluorescent DNA toolkit: synthesis and properties of oligonucleotides containing new Cy3, Cy5 and Cy3B monomers.

Authors:  Lucy M Hall; Marta Gerowska; Tom Brown
Journal:  Nucleic Acids Res       Date:  2012-04-11       Impact factor: 16.971

6.  TEMPO-derived spin labels linked to the nucleobases adenine and cytosine for probing local structural perturbations in DNA by EPR spectroscopy.

Authors:  Dnyaneshwar B Gophane; Snorri Th Sigurdsson
Journal:  Beilstein J Org Chem       Date:  2015-02-09       Impact factor: 2.883

7.  Pentacyclic adenine: a versatile and exceptionally bright fluorescent DNA base analogue.

Authors:  Mattias Bood; Anders F Füchtbauer; Moa S Wranne; Jong Jin Ro; Sangamesh Sarangamath; Afaf H El-Sagheer; Déborah L M Rupert; Rachel S Fisher; Steven W Magennis; Anita C Jones; Fredrik Höök; Tom Brown; Byeang Hyean Kim; Anders Dahlén; L Marcus Wilhelmsson; Morten Grøtli
Journal:  Chem Sci       Date:  2018-03-01       Impact factor: 9.825

Review 8.  Single-Labeled Oligonucleotides Showing Fluorescence Changes Upon Hybridization with Target Nucleic Acids.

Authors:  Gil Tae Hwang
Journal:  Molecules       Date:  2018-01-08       Impact factor: 4.411
  8 in total

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