Literature DB >> 26413041

Synthesis and optical behaviors of 6-seleno-deoxyguanosine.

Kaur Manindar1, Huang Zhen1.   

Abstract

We have developed a simple method to synthesize 6-seleno-2'-deoxyguanosine (SedG) by selectively replacing the 6-oxygen atom with selenium. This selenium-atom-specific modification (SAM) alters the optical properties of the naturally occurring 2'-deoxyguanosine (dG). Unlike the native dG, the UVabsorption of SedG is significantly influenced by the pH of the aqueous solution. Moreover, SedG is fluorescent at the physiological pH and exhibits pH-dependent fluorescence in aqueous solutions. Furthermore, SedG has noticeable fluorescence in non-aqueous solutions, indicating its sensitivity to environmental changes. This is the first time a fluorescent nucleoside by single-atom alteration has been observed. Fluorescent nucleosides modified by a single atom have great potential as molecular probes with minimal perturbations to investigate nucleoside interactions with proteins, such as membrane-transporter proteins.

Entities:  

Keywords:  RNA; fluorescent DNA; nucleic acid probes; nucleoside with single-atom modification; selenium derivatization and fluorescence

Year:  2014        PMID: 26413041      PMCID: PMC4581536          DOI: 10.1007/s11426-013-5038-y

Source DB:  PubMed          Journal:  Sci China Chem        ISSN: 1869-1870            Impact factor:   9.445


  36 in total

1.  The ultraviolet fluorescence of proteins in neutral solution.

Authors:  F W TEALE
Journal:  Biochem J       Date:  1960-08       Impact factor: 3.857

2.  Engineering de novo membrane-mediated protein-protein communication networks.

Authors:  Kalypso Charalambous; Paula J Booth; Rudiger Woscholski; John M Seddon; Richard H Templer; Robert V Law; Laura M C Barter; Oscar Ces
Journal:  J Am Chem Soc       Date:  2012-03-26       Impact factor: 15.419

3.  Synthesis and antitumor activity of alpha-and beta-2'-deoxy-6-selenoguanosine and certain related derivatives.

Authors:  G H Milne; L B Townsend
Journal:  J Med Chem       Date:  1974-03       Impact factor: 7.446

Review 4.  Selenium derivatization of nucleic acids for X-ray crystal-structure and function studies.

Authors:  Jia Sheng; Zhen Huang
Journal:  Chem Biodivers       Date:  2010-04       Impact factor: 2.408

5.  Conformational analysis of membrane proteins in phospholipid bilayer nanodiscs by hydrogen exchange mass spectrometry.

Authors:  Christine M Hebling; Christopher R Morgan; Darrel W Stafford; James W Jorgenson; Kasper D Rand; John R Engen
Journal:  Anal Chem       Date:  2010-07-01       Impact factor: 6.986

6.  Synthesis and crystallographic analysis of 5-Se-thymidine DNAs.

Authors:  Abdalla E A Hassan; Jia Sheng; Jiansheng Jiang; Wen Zhang; Zhen Huang
Journal:  Org Lett       Date:  2009-06-18       Impact factor: 6.005

Review 7.  Visualizing functional motions of membrane transporters with molecular dynamics simulations.

Authors:  Saher A Shaikh; Jing Li; Giray Enkavi; Po-Chao Wen; Zhijian Huang; Emad Tajkhorshid
Journal:  Biochemistry       Date:  2013-01-17       Impact factor: 3.162

8.  8-vinyl-deoxyadenosine, an alternative fluorescent nucleoside analog to 2'-deoxyribosyl-2-aminopurine with improved properties.

Authors:  Nouha Ben Gaied; Nicole Glasser; Nick Ramalanjaona; Hervé Beltz; Philippe Wolff; Roland Marquet; Alain Burger; Yves Mély
Journal:  Nucleic Acids Res       Date:  2005-02-17       Impact factor: 16.971

9.  2-Selenouridine triphosphate synthesis and Se-RNA transcription.

Authors:  Huiyan Sun; Sibo Jiang; Julianne Caton-Williams; Hehua Liu; Zhen Huang
Journal:  RNA       Date:  2013-07-25       Impact factor: 4.942

10.  Structural insights of non-canonical U*U pair and Hoogsteen interaction probed with Se atom.

Authors:  Jia Sheng; Jianhua Gan; Alexei S Soares; Jozef Salon; Zhen Huang
Journal:  Nucleic Acids Res       Date:  2013-09-05       Impact factor: 16.971

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