Literature DB >> 20851792

A differential geometric approach to automated segmentation of human airway tree.

Jiantao Pu1, Carl Fuhrman, Walter F Good, Frank C Sciurba, David Gur.   

Abstract

Airway diseases are frequently associated with morphological changes that may affect the physiology of the lungs. Accurate characterization of airways may be useful for quantitatively assessing prognosis and for monitoring therapeutic efficacy. The information gained may also provide insight into the underlying mechanisms of various lung diseases. We developed a computerized scheme to automatically segment the 3-D human airway tree depicted on computed tomography (CT) images. The method takes advantage of both principal curvatures and principal directions in differentiating airways from other tissues in geometric space. A "puzzle game" procedure is used to identify false negative regions and reduce false positive regions that do not meet the shape analysis criteria. The negative impact of partial volume effects on small airway detection is partially alleviated by repeating the developed differential geometric analysis on lung anatomical structures modeled at multiple iso-values (thresholds). In addition to having advantages, such as full automation, easy implementation and relative insensitivity to image noise and/or artifacts, this scheme has virtually no leakage issues and can be easily extended to the extraction or the segmentation of other tubular type structures (e.g., vascular tree). The performance of this scheme was assessed quantitatively using 75 chest CT examinations acquired on 45 subjects with different slice thicknesses and using 20 publicly available test cases that were originally designed for evaluating the performance of different airway tree segmentation algorithms.

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Year:  2010        PMID: 20851792      PMCID: PMC3271357          DOI: 10.1109/TMI.2010.2076300

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  23 in total

1.  Computerized detection of pulmonary nodules on CT scans.

Authors:  S G Armato; M L Giger; C J Moran; J T Blackburn; K Doi; H MacMahon
Journal:  Radiographics       Date:  1999 Sep-Oct       Impact factor: 5.333

2.  Computer-aided diagnostic scheme for lung nodule detection in digital chest radiographs by use of a multiple-template matching technique.

Authors:  Q Li; S Katsuragawa; K Doi
Journal:  Med Phys       Date:  2001-10       Impact factor: 4.071

3.  Three-dimensional human airway segmentation methods for clinical virtual bronchoscopy.

Authors:  Atilla P Kiraly; William E Higgins; Geoffrey McLennan; Eric A Hoffman; Joseph M Reinhardt
Journal:  Acad Radiol       Date:  2002-10       Impact factor: 3.173

4.  Segmentation and analysis of the human airway tree from three-dimensional X-ray CT images.

Authors:  Deniz Aykac; Eric A Hoffman; Geoffrey McLennan; Joseph M Reinhardt
Journal:  IEEE Trans Med Imaging       Date:  2003-08       Impact factor: 10.048

5.  Robust 3-D airway tree segmentation for image-guided peripheral bronchoscopy.

Authors:  Michael W Graham; Jason D Gibbs; Duane C Cornish; William E Higgins
Journal:  IEEE Trans Med Imaging       Date:  2010-03-22       Impact factor: 10.048

6.  Robust segmentation and anatomical labeling of the airway tree from thoracic CT scans.

Authors:  Bram van Ginneken; Wouter Baggerman; Eva M van Rikxoort
Journal:  Med Image Comput Comput Assist Interv       Date:  2008

7.  Selective enhancement filters for nodules, vessels, and airway walls in two- and three-dimensional CT scans.

Authors:  Qiang Li; Shusuke Sone; Kunio Doi
Journal:  Med Phys       Date:  2003-08       Impact factor: 4.071

8.  Computer-aided diagnosis: the emerging of three CAD systems induced by Japanese health care needs.

Authors:  Hiroshi Fujita; Yoshikazu Uchiyama; Toshiaki Nakagawa; Daisuke Fukuoka; Yuji Hatanaka; Takeshi Hara; Gobert N Lee; Yoshinori Hayashi; Yuji Ikedo; Xin Gao; Xiangrong Zhou
Journal:  Comput Methods Programs Biomed       Date:  2008-06-02       Impact factor: 5.428

9.  Patient-specific models for lung nodule detection and surveillance in CT images.

Authors:  M S Brown; M F McNitt-Gray; J G Goldin; R D Suh; J W Sayre; D R Aberle
Journal:  IEEE Trans Med Imaging       Date:  2001-12       Impact factor: 10.048

10.  Airflow limitation and airway dimensions in chronic obstructive pulmonary disease.

Authors:  Masaru Hasegawa; Yasuyuki Nasuhara; Yuya Onodera; Hironi Makita; Katsura Nagai; Satoshi Fuke; Yoko Ito; Tomoko Betsuyaku; Masaharu Nishimura
Journal:  Am J Respir Crit Care Med       Date:  2006-03-23       Impact factor: 21.405

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  20 in total

Review 1.  CT based computerized identification and analysis of human airways: a review.

Authors:  Jiantao Pu; Suicheng Gu; Shusen Liu; Shaocheng Zhu; David Wilson; Jill M Siegfried; David Gur
Journal:  Med Phys       Date:  2012-05       Impact factor: 4.071

2.  Illustration of the obstacles in computerized lung segmentation using examples.

Authors:  Xin Meng; Yongqian Qiang; Shaocheng Zhu; Carl Fuhrman; Jill M Siegfried; Jiantao Pu
Journal:  Med Phys       Date:  2012-08       Impact factor: 4.071

3.  Imaging Features of Chronic Bronchitis with Preserved Ratio and Impaired Spirometry (PRISm).

Authors:  Xia Wei; Qi Ding; Nan Yu; Jiuyun Mi; Jingting Ren; Jie Li; Shudi Xu; Yanzhong Gao; Youmin Guo
Journal:  Lung       Date:  2018-09-14       Impact factor: 2.584

4.  A "loop" shape descriptor and its application to automated segmentation of airways from CT scans.

Authors:  Jiantao Pu; Chenwang Jin; Nan Yu; Yongqiang Qian; Xiaohua Wang; Xin Meng; Youmin Guo
Journal:  Med Phys       Date:  2015-06       Impact factor: 4.071

5.  Graph-Based Airway Tree Reconstruction From Chest CT Scans: Evaluation of Different Features on Five Cohorts.

Authors:  Christian Bauer; Michael Eberlein; Reinhard R Beichel
Journal:  IEEE Trans Med Imaging       Date:  2014-11-25       Impact factor: 10.048

6.  Vasculature surrounding a nodule: A novel lung cancer biomarker.

Authors:  Xiaohua Wang; Joseph K Leader; Renwei Wang; David Wilson; James Herman; Jian-Min Yuan; Jiantao Pu
Journal:  Lung Cancer       Date:  2017-10-27       Impact factor: 5.705

7.  Computer-aided quantitative MSCT measurements may be useful for congenital lung malformations surgical approach selection.

Authors:  Weili Yang; Cong Shen; Nan Yu; Youmin Guo; Weikang Pan; Peng Li; Ya Gao; Xin Chen; Jiwen Cheng
Journal:  Pediatr Surg Int       Date:  2021-07-02       Impact factor: 1.827

8.  Three-dimensional airway tree architecture and pulmonary function.

Authors:  Jiantao Pu; Joseph K Leader; Xin Meng; Bruce Whiting; David Wilson; Frank C Sciurba; John J Reilly; William L Bigbee; Jill Siegfried; David Gur
Journal:  Acad Radiol       Date:  2012-08-11       Impact factor: 3.173

Review 9.  Detection of Lung Contour with Closed Principal Curve and Machine Learning.

Authors:  Tao Peng; Yihuai Wang; Thomas Canhao Xu; Lianmin Shi; Jianwu Jiang; Shilang Zhu
Journal:  J Digit Imaging       Date:  2018-08       Impact factor: 4.056

10.  Computerized identification of airway wall in CT examinations using a 3D active surface evolution approach.

Authors:  Suicheng Gu; Carl Fuhrman; Xin Meng; Jill M Siegfried; David Gur; Joseph K Leader; Frank C Sciurba; Jiantao Pu
Journal:  Med Image Anal       Date:  2012-11-29       Impact factor: 8.545

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