Literature DB >> 22894423

Illustration of the obstacles in computerized lung segmentation using examples.

Xin Meng1, Yongqian Qiang, Shaocheng Zhu, Carl Fuhrman, Jill M Siegfried, Jiantao Pu.   

Abstract

PURPOSE: Automated lung volume segmentation is often a preprocessing step in quantitative lung computed tomography (CT) image analysis. The objective of this study is to identify the obstacles in computerized lung volume segmentation and illustrate those explicitly using real examples. Awareness of these "difficult" cases may be helpful for the development of a robust and consistent lung segmentation algorithm.
METHODS: We collected a large diverse dataset consisting of 2768 chest CT examinations acquired on 2292 subjects from various sources. These examinations cover a wide range of diseases, including lung cancer, chronic obstructive pulmonary disease, human immunodeficiency virus, pulmonary embolism, pneumonia, asthma, and interstitial lung disease (ILD). The CT acquisition protocols, including dose, scanners, and reconstruction kernels, vary significantly. After the application of a "neutral" thresholding-based approach to the collected CT examinations in a batch manner, the failed cases were subjectively identified and classified into different subgroups.
RESULTS: Totally, 121 failed examinations are identified, corresponding to a failure ratio of 4.4%. These failed cases are summarized as 11 different subgroups, which is further classified into 3 broad categories: (1) failure caused by diseases, (2) failure caused by anatomy variability, and (3) failure caused by external factors. The failure percentages in these categories are 62.0%, 32.2%, and 5.8%, respectively.
CONCLUSIONS: The presence of specific lung diseases (e.g., pulmonary nodules, ILD, and pneumonia) is the primary issue in computerized lung segmentation. The segmentation failures caused by external factors and anatomy variety are relatively low but unavoidable in practice. It is desirable to develop robust schemes to handle these issues in a single pass when a large number of CT examinations need to be analyzed.

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Mesh:

Year:  2012        PMID: 22894423      PMCID: PMC3416879          DOI: 10.1118/1.4737023

Source DB:  PubMed          Journal:  Med Phys        ISSN: 0094-2405            Impact factor:   4.071


  23 in total

1.  Computerized detection of pulmonary nodules on CT scans.

Authors:  S G Armato; M L Giger; C J Moran; J T Blackburn; K Doi; H MacMahon
Journal:  Radiographics       Date:  1999 Sep-Oct       Impact factor: 5.333

2.  Automatic lung segmentation for accurate quantitation of volumetric X-ray CT images.

Authors:  S Hu; E A Hoffman; J M Reinhardt
Journal:  IEEE Trans Med Imaging       Date:  2001-06       Impact factor: 10.048

Review 3.  Computer analysis of computed tomography scans of the lung: a survey.

Authors:  Ingrid Sluimer; Arnold Schilham; Mathias Prokop; Bram van Ginneken
Journal:  IEEE Trans Med Imaging       Date:  2006-04       Impact factor: 10.048

4.  The Lung Image Database Consortium (LIDC): an evaluation of radiologist variability in the identification of lung nodules on CT scans.

Authors:  Samuel G Armato; Michael F McNitt-Gray; Anthony P Reeves; Charles R Meyer; Geoffrey McLennan; Denise R Aberle; Ella A Kazerooni; Heber MacMahon; Edwin J R van Beek; David Yankelevitz; Eric A Hoffman; Claudia I Henschke; Rachael Y Roberts; Matthew S Brown; Roger M Engelmann; Richard C Pais; Christopher W Piker; David Qing; Masha Kocherginsky; Barbara Y Croft; Laurence P Clarke
Journal:  Acad Radiol       Date:  2007-11       Impact factor: 3.173

5.  Automatic segmentation of lung parenchyma in the presence of diseases based on curvature of ribs.

Authors:  Mithun N Prasad; Matthew S Brown; Shama Ahmad; Fereidoun Abtin; Jared Allen; Irene da Costa; Hyun J Kim; Michael F McNitt-Gray; Jonathan G Goldin
Journal:  Acad Radiol       Date:  2008-09       Impact factor: 3.173

Review 6.  CT based computerized identification and analysis of human airways: a review.

Authors:  Jiantao Pu; Suicheng Gu; Shusen Liu; Shaocheng Zhu; David Wilson; Jill M Siegfried; David Gur
Journal:  Med Phys       Date:  2012-05       Impact factor: 4.071

7.  Adaptive border marching algorithm: automatic lung segmentation on chest CT images.

Authors:  Jiantao Pu; Justus Roos; Chin A Yi; Sandy Napel; Geoffrey D Rubin; David S Paik
Journal:  Comput Med Imaging Graph       Date:  2008-06-02       Impact factor: 4.790

8.  Automatic lung segmentation from thoracic computed tomography scans using a hybrid approach with error detection.

Authors:  Eva M van Rikxoort; Bartjan de Hoop; Max A Viergever; Mathias Prokop; Bram van Ginneken
Journal:  Med Phys       Date:  2009-07       Impact factor: 4.071

9.  Method for segmenting chest CT image data using an anatomical model: preliminary results.

Authors:  M S Brown; M F McNitt-Gray; N J Mankovich; J G Goldin; J Hiller; L S Wilson; D R Aberle
Journal:  IEEE Trans Med Imaging       Date:  1997-12       Impact factor: 10.048

10.  An automated CT based lung nodule detection scheme using geometric analysis of signed distance field.

Authors:  Jiantao Pu; Bin Zheng; Joseph Ken Leader; Xiao-Hui Wang; David Gur
Journal:  Med Phys       Date:  2008-08       Impact factor: 4.071

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