Literature DB >> 20843958

PedMerge: merging pedigrees to facilitate family-based genetic statistical analyses.

Rosemarie Plaetke1, Federico Balbi.   

Abstract

SUMMARY: PedMerge allows users to accurately and efficiently merge separately ascertained pedigrees that belong to the same extended family. In addition to validation checks of pedigree structure, the software provides files in LINKAGE or PEDSYS format that easily allow to be used by a variety of genetic statistical software packages including LINKAGE, SOLAR, SLINK or can be further manipulated with Mega2. AVAILABILITY: http://sites.google.com/site/rosemarieplaetke/home/s/pedmerge

Mesh：

Year:  2010        PMID： 20843958      PMCID： PMC2981498          DOI： 10.1093/bioinformatics/btq523

Source DB:  PubMed          Journal:  Bioinformatics        ISSN： 1367-4803            Impact factor:   6.937


  5 in total

1.  Mega2: data-handling for facilitating genetic linkage and association analyses.

Authors:  Nandita Mukhopadhyay; Lee Almasy; Mark Schroeder; William P Mulvihill; Daniel E Weeks
Journal:  Bioinformatics       Date:  2005-03-03       Impact factor: 6.937

2.  Building a community-based participatory research center to investigate obesity and diabetes in Alaska Natives.

Authors:  Bert B Boyer; Gerald V Mohatt; Cecile Lardon; Rosemarie Plaetke; Bret R Luick; Scarlett H Hutchison; Gabriela Antunez de Mayolo; Elizabeth Ruppert; Andrea Bersamin
Journal:  Int J Circumpolar Health       Date:  2005-06       Impact factor: 1.228

Review 3.  Wild pedigrees: the way forward.

Authors:  J M Pemberton
Journal:  Proc Biol Sci       Date:  2008-03-22       Impact factor: 5.349

4.  Multipoint quantitative-trait linkage analysis in general pedigrees.

Authors:  L Almasy; J Blangero
Journal:  Am J Hum Genet       Date:  1998-05       Impact factor: 11.025

Review 5.  Finding genes underlying human disease.

Authors:  C M Stein; R C Elston
Journal:  Clin Genet       Date:  2009-02       Impact factor: 4.438
  5 in total
  4 in total

1.  Genetic polymorphisms in carnitine palmitoyltransferase 1A gene are associated with variation in body composition and fasting lipid traits in Yup'ik Eskimos.

Authors:  Dominick J Lemas; Howard W Wiener; Diane M O'Brien; Scarlett Hopkins; Kimber L Stanhope; Peter J Havel; David B Allison; Jose R Fernandez; Hemant K Tiwari; Bert B Boyer
Journal:  J Lipid Res       Date:  2011-11-01       Impact factor: 5.922

2.  Evidence for novel genetic loci associated with metabolic traits in Yup'ik people.

Authors:  Stella Aslibekyan; Laura Kelly Vaughan; Howard W Wiener; Dominick J Lemas; Yann C Klimentidis; Peter J Havel; Kimber L Stanhope; Diane M O'brien; Scarlett E Hopkins; Bert B Boyer; Hemant K Tiwari
Journal:  Am J Hum Biol       Date:  2013-08-01       Impact factor: 1.937

3.  Obesity polymorphisms identified in genome-wide association studies interact with n-3 polyunsaturated fatty acid intake and modify the genetic association with adiposity phenotypes in Yup'ik people.

Authors:  Dominick J Lemas; Yann C Klimentidis; Howard H Wiener; Diane M O'Brien; Scarlett E Hopkins; David B Allison; Jose R Fernandez; Hemant K Tiwari; Bert B Boyer
Journal:  Genes Nutr       Date:  2013-03-23       Impact factor: 5.523

4.  Genetic ME-a visualization application for merging and editing pedigrees for genetic studies.

Authors:  Diem K Bui; Yingda Jiang; Xin Wei; Maria C Ortube; Daniel E Weeks; Yvette P Conley; Michael B Gorin
Journal:  BMC Res Notes       Date:  2015-06-16
  4 in total

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