Literature DB >> 20835982

The lung physiome: merging imaging-based measures with predictive computational models.

Merryn H Tawhai1, Eric A Hoffman2, Ching-Long Lin3.   

Abstract

Global measurements of the lung provided by standard pulmonary function tests do not give insight into the regional basis of lung function and lung disease. Advances in imaging methodologies, computer technologies, and subject-specific simulations are creating new opportunities to study structure-function relationships in the lung through multidisciplinary research. The digital Human Lung Atlas is an image-based resource compiled from male and female subjects spanning several decades of age. The Atlas comprises both structural and functional measures, and includes computational models derived to match individual subjects for personalized prediction of function. The computational models in the Atlas form part of the Lung Physiome project, which is an international effort to develop integrative models of lung function at all levels of biological organization. The computational models provide mechanistic interpretation of imaging measures; the Atlas provides structural data on which to base model geometry, and functional data against which to test hypotheses. The example of simulating airflow on a subject-specific basis is considered. Methods for deriving multiscale models of the airway geometry for individual subjects in the Atlas are outlined, and methods for modeling turbulent flows in the airway are reviewed.

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Year:  2009        PMID: 20835982      PMCID: PMC2943868          DOI: 10.1002/wsbm.17

Source DB:  PubMed          Journal:  Wiley Interdiscip Rev Syst Biol Med        ISSN: 1939-005X


  63 in total

1.  Computational predictions of pulmonary blood flow gradients: gravity versus structure.

Authors:  Kelly S Burrowes; Merryn H Tawhai
Journal:  Respir Physiol Neurobiol       Date:  2005-12-28       Impact factor: 1.931

2.  Effects of mesh style and grid convergence on particle deposition in bifurcating airway models with comparisons to experimental data.

Authors:  P Worth Longest; Samir Vinchurkar
Journal:  Med Eng Phys       Date:  2006-06-30       Impact factor: 2.242

3.  Flow and particle deposition patterns in a realistic human double bifurcation airway model.

Authors:  L T Choi; J Y Tu; H F Li; F Thien
Journal:  Inhal Toxicol       Date:  2007-02       Impact factor: 2.724

4.  Characterization of regional and local deposition of inhaled aerosol drugs in the respiratory system by computational fluid and particle dynamics methods.

Authors:  Arpád Farkas; Imre Balásházy; Katalin Szocs
Journal:  J Aerosol Med       Date:  2006

5.  Characteristics of the turbulent laryngeal jet and its effect on airflow in the human intra-thoracic airways.

Authors:  Ching-Long Lin; Merryn H Tawhai; Geoffrey McLennan; Eric A Hoffman
Journal:  Respir Physiol Neurobiol       Date:  2007-02-14       Impact factor: 1.931

6.  Comparison of particle tracking algorithms in commercial CFD packages: sedimentation and diffusion.

Authors:  Risa J Robinson; Pam Snyder; Michael J Oldham
Journal:  Inhal Toxicol       Date:  2007-05       Impact factor: 2.724

7.  Respiratory flow in obstructed airways.

Authors:  X L Yang; Yang Liu; H Y Luo
Journal:  J Biomech       Date:  2005-11-21       Impact factor: 2.712

8.  Effect of low-xenon and krypton supplementation on signal/noise of regional CT-based ventilation measurements.

Authors:  Deokiee Chon; Kenneth C Beck; Brett A Simon; Hidenori Shikata; Osama I Saba; Eric A Hoffman
Journal:  J Appl Physiol (1985)       Date:  2006-11-22

9.  In vitro validation of computational fluid dynamic simulation in human proximal airways with hyperpolarized 3He magnetic resonance phase-contrast velocimetry.

Authors:  Ludovic de Rochefort; Laurence Vial; Redouane Fodil; Xavier Maître; Bruno Louis; Daniel Isabey; Georges Caillibotte; Marc Thiriet; Jacques Bittoun; Emmanuel Durand; Gabriela Sbirlea-Apiou
Journal:  J Appl Physiol (1985)       Date:  2007-02-08

10.  In vivo He-3 MR images of guinea pig lungs.

Authors:  R D Black; H L Middleton; G D Cates; G P Cofer; B Driehuys; W Happer; L W Hedlund; G A Johnson; M D Shattuck; J C Swartz
Journal:  Radiology       Date:  1996-06       Impact factor: 11.105

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  18 in total

1.  Phase-contrast MRI and CFD modeling of apparent ³He gas flow in rat pulmonary airways.

Authors:  Kevin R Minard; Andrew P Kuprat; Senthil Kabilan; Richard E Jacob; Daniel R Einstein; James P Carson; Richard A Corley
Journal:  J Magn Reson       Date:  2012-05-23       Impact factor: 2.229

2.  Numerical simulations of aerosol delivery to the human lung with an idealized laryngeal model, image-based airway model, and automatic meshing algorithm.

Authors:  Shinjiro Miyawaki; Eric A Hoffman; Ching-Long Lin
Journal:  Comput Fluids       Date:  2017-02-10       Impact factor: 3.013

Review 3.  Space physiology IV: mathematical modeling of the cardiovascular system in space exploration.

Authors:  M Keith Sharp; Jerry Joseph Batzel; Jean-Pierre Montani
Journal:  Eur J Appl Physiol       Date:  2013-03-29       Impact factor: 3.078

4.  Intratidal Overdistention and Derecruitment in the Injured Lung: A Simulation Study.

Authors:  Reza Amini; Jacob Herrmann; David W Kaczka
Journal:  IEEE Trans Biomed Eng       Date:  2016-05-24       Impact factor: 4.538

5.  Metrics of lung tissue heterogeneity depend on BMI but not age.

Authors:  K Subramaniam; A R Clark; E A Hoffman; M H Tawhai
Journal:  J Appl Physiol (1985)       Date:  2018-02-22

6.  Automatic construction of subject-specific human airway geometry including trifurcations based on a CT-segmented airway skeleton and surface.

Authors:  Shinjiro Miyawaki; Merryn H Tawhai; Eric A Hoffman; Sally E Wenzel; Ching-Long Lin
Journal:  Biomech Model Mechanobiol       Date:  2016-10-04

7.  Systems biology and physiome projects.

Authors:  Aleksander S Popel; Peter J Hunter
Journal:  Wiley Interdiscip Rev Syst Biol Med       Date:  2009 Sep-Oct

Review 8.  Image-based modeling of lung structure and function.

Authors:  Merryn H Tawhai; Ching-Long Lin
Journal:  J Magn Reson Imaging       Date:  2010-12       Impact factor: 4.813

9.  Quantification of tissue-engineered trachea performance with computational fluid dynamics.

Authors:  Lauren Eichaker; Chengyu Li; Nakesha King; Victoria Pepper; Cameron Best; Ekene Onwuka; Eric Heuer; Kai Zhao; Jonathan Grischkan; Christopher Breuer; Jed Johnson; Tendy Chiang
Journal:  Laryngoscope       Date:  2018-05-14       Impact factor: 3.325

Review 10.  Lung Structure and the Intrinsic Challenges of Gas Exchange.

Authors:  Connie C W Hsia; Dallas M Hyde; Ewald R Weibel
Journal:  Compr Physiol       Date:  2016-03-15       Impact factor: 9.090

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