Literature DB >> 20798312

Atomic structure of human adenovirus by cryo-EM reveals interactions among protein networks.

Hongrong Liu1, Lei Jin, Sok Boon S Koh, Ivo Atanasov, Stan Schein, Lily Wu, Z Hong Zhou.   

Abstract

Construction of a complex virus may involve a hierarchy of assembly elements. Here, we report the structure of the whole human adenovirus virion at 3.6 angstroms resolution by cryo-electron microscopy (cryo-EM), revealing in situ atomic models of three minor capsid proteins (IIIa, VIII, and IX), extensions of the (penton base and hexon) major capsid proteins, and interactions within three protein-protein networks. One network is mediated by protein IIIa at the vertices, within group-of-six (GOS) tiles--a penton base and its five surrounding hexons. Another is mediated by ropes (protein IX) that lash hexons together to form group-of-nine (GON) tiles and bind GONs to GONs. The third, mediated by IIIa and VIII, binds each GOS to five surrounding GONs. Optimization of adenovirus for cancer and gene therapy could target these networks.

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Year:  2010        PMID: 20798312      PMCID: PMC3412078          DOI: 10.1126/science.1187433

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  39 in total

1.  Optimal determination of particle orientation, absolute hand, and contrast loss in single-particle electron cryomicroscopy.

Authors:  Peter B Rosenthal; Richard Henderson
Journal:  J Mol Biol       Date:  2003-10-31       Impact factor: 5.469

2.  Development of a size-restricted pIX-deleted helper virus for amplification of helper-dependent adenovirus vectors.

Authors:  K L Sargent; P Ng; C Evelegh; F L Graham; R J Parks
Journal:  Gene Ther       Date:  2004-03       Impact factor: 5.250

3.  Insights into assembly from structural analysis of bacteriophage PRD1.

Authors:  Nicola G A Abrescia; Joseph J B Cockburn; Jonathan M Grimes; Geoffrey C Sutton; Jonathan M Diprose; Sarah J Butcher; Stephen D Fuller; Carmen San Martín; Roger M Burnett; David I Stuart; Dennis H Bamford; Jaana K H Bamford
Journal:  Nature       Date:  2004-11-04       Impact factor: 49.962

4.  Control of adenovirus packaging.

Authors:  Philomena Ostapchuk; Patrick Hearing
Journal:  J Cell Biochem       Date:  2005-09-01       Impact factor: 4.429

5.  Hexon-chimaeric adenovirus serotype 5 vectors circumvent pre-existing anti-vector immunity.

Authors:  Diane M Roberts; Anjali Nanda; Menzo J E Havenga; Peter Abbink; Diana M Lynch; Bonnie A Ewald; Jinyan Liu; Anna R Thorner; Patricia E Swanson; Darci A Gorgone; Michelle A Lifton; Angelique A C Lemckert; Lennart Holterman; Bing Chen; Athmanundh Dilraj; Angela Carville; Keith G Mansfield; Jaap Goudsmit; Dan H Barouch
Journal:  Nature       Date:  2006-04-16       Impact factor: 49.962

Review 6.  Adenoviruses: update on structure and function.

Authors:  W C Russell
Journal:  J Gen Virol       Date:  2009-01       Impact factor: 3.891

7.  Direct visualization of the putative portal in the Kaposi's sarcoma-associated herpesvirus capsid by cryoelectron tomography.

Authors:  Binbin Deng; Christine M O'Connor; Dean H Kedes; Z Hong Zhou
Journal:  J Virol       Date:  2007-01-10       Impact factor: 5.103

8.  Structure of epsilon15 bacteriophage reveals genome organization and DNA packaging/injection apparatus.

Authors:  Wen Jiang; Juan Chang; Joanita Jakana; Peter Weigele; Jonathan King; Wah Chiu
Journal:  Nature       Date:  2006-02-02       Impact factor: 49.962

9.  Reversed-phase high-performance liquid chromatographic assay for the adenovirus type 5 proteome.

Authors:  E Lehmberg; J A Traina; J A Chakel; R J Chang; M Parkman; M T McCaman; P K Murakami; V Lahidji; J W Nelson; W S Hancock; E Nestaas; E Pungor
Journal:  J Chromatogr B Biomed Sci Appl       Date:  1999-09-24

10.  The structure of the adenovirus capsid. II. The packing symmetry of hexon and its implications for viral architecture.

Authors:  R M Burnett
Journal:  J Mol Biol       Date:  1985-09-05       Impact factor: 5.469

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  164 in total

1.  Adenovirus serotype 5-specific neutralizing antibodies target multiple hexon hypervariable regions.

Authors:  Ritu R Bradley; Lori F Maxfield; Diana M Lynch; Mark J Iampietro; Erica N Borducchi; Dan H Barouch
Journal:  J Virol       Date:  2011-11-09       Impact factor: 5.103

2.  Androgen-independent molecular imaging vectors to detect castration-resistant and metastatic prostate cancer.

Authors:  Ziyue Karen Jiang; Makoto Sato; Liu H Wei; Chinghai Kao; Lily Wu
Journal:  Cancer Res       Date:  2011-09-20       Impact factor: 12.701

3.  Initial evaluation of a direct detection device detector for single particle cryo-electron microscopy.

Authors:  Anna-Clare Milazzo; Anchi Cheng; Arne Moeller; Dmitry Lyumkis; Erica Jacovetty; James Polukas; Mark H Ellisman; Nguyen-Huu Xuong; Bridget Carragher; Clinton S Potter
Journal:  J Struct Biol       Date:  2011-09-10       Impact factor: 2.867

4.  EM-fold: de novo atomic-detail protein structure determination from medium-resolution density maps.

Authors:  Steffen Lindert; Nathan Alexander; Nils Wötzel; Mert Karakaş; Phoebe L Stewart; Jens Meiler
Journal:  Structure       Date:  2012-03-07       Impact factor: 5.006

5.  Visualizing large RNA molecules in solution.

Authors:  Ajaykumar Gopal; Z Hong Zhou; Charles M Knobler; William M Gelbart
Journal:  RNA       Date:  2011-12-21       Impact factor: 4.942

6.  Ab initio protein modeling into CryoEM density maps using EM-Fold.

Authors:  Steffen Lindert; Tommy Hofmann; Nils Wötzel; Mert Karakaş; Phoebe L Stewart; Jens Meiler
Journal:  Biopolymers       Date:  2012-02-03       Impact factor: 2.505

7.  Functional genetic and biophysical analyses of membrane disruption by human adenovirus.

Authors:  Crystal L Moyer; Christopher M Wiethoff; Oana Maier; Jason G Smith; Glen R Nemerow
Journal:  J Virol       Date:  2011-01-05       Impact factor: 5.103

8.  The Role of Hexon Protein as a Molecular Mold in Patterning the Protein IX Organization in Human Adenoviruses.

Authors:  Vijay S Reddy
Journal:  J Mol Biol       Date:  2017-07-18       Impact factor: 5.469

Review 9.  Optimized negative-staining electron microscopy for lipoprotein studies.

Authors:  Lei Zhang; Huimin Tong; Mark Garewal; Gang Ren
Journal:  Biochim Biophys Acta       Date:  2012-09-29

10.  AAA ATPase p97/VCP is essential for TRIM21-mediated virus neutralization.

Authors:  Felix Hauler; Donna L Mallery; William A McEwan; Susanna R Bidgood; Leo C James
Journal:  Proc Natl Acad Sci U S A       Date:  2012-10-22       Impact factor: 11.205

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