Literature DB >> 20713007

Asymmetry as the key to clathrin cage assembly.

Wouter K den Otter1, Marten R Renes, W J Briels.   

Abstract

The self-assembly of clathrin proteins into polyhedral cages is simulated for the first time (to our knowledge) by introducing a coarse-grain triskelion particle modeled after clathrin's characteristic shape. The simulations indicate that neither this shape, nor the antiparallel binding of four legs along the lattice edges, is sufficient to induce cage formation from a random solution. Asymmetric intersegmental interactions, which probably result from a patchy distribution of interactions along the legs' surfaces, prove to be crucial for the efficient self-assembly of cages. 2010 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2010        PMID: 20713007      PMCID: PMC2920741          DOI: 10.1016/j.bpj.2010.06.011

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  25 in total

1.  Clathrin self-assembly is mediated by a tandemly repeated superhelix.

Authors:  J A Ybe; F M Brodsky; K Hofmann; K Lin; S H Liu; L Chen; T N Earnest; R J Fletterick; P K Hwang
Journal:  Nature       Date:  1999-05-27       Impact factor: 49.962

Review 2.  New faces of the familiar clathrin lattice.

Authors:  Jeremy D Wilbur; Peter K Hwang; Frances M Brodsky
Journal:  Traffic       Date:  2005-04       Impact factor: 6.215

3.  Molecular model for a complete clathrin lattice from electron cryomicroscopy.

Authors:  Alexander Fotin; Yifan Cheng; Piotr Sliz; Nikolaus Grigorieff; Stephen C Harrison; Tomas Kirchhausen; Thomas Walz
Journal:  Nature       Date:  2004-10-24       Impact factor: 49.962

4.  Conformation of a clathrin triskelion in solution.

Authors:  Matthew L Ferguson; Kondury Prasad; Dan L Sackett; Hacène Boukari; Eileen M Lafer; Ralph Nossal
Journal:  Biochemistry       Date:  2006-05-09       Impact factor: 3.162

5.  Cryo-electron tomography of clathrin-coated vesicles: structural implications for coat assembly.

Authors:  Yifan Cheng; Werner Boll; Tomas Kirchhausen; Stephen C Harrison; Thomas Walz
Journal:  J Mol Biol       Date:  2006-10-14       Impact factor: 5.469

Review 6.  Life of a clathrin coat: insights from clathrin and AP structures.

Authors:  Melissa A Edeling; Corinne Smith; David Owen
Journal:  Nat Rev Mol Cell Biol       Date:  2006-01       Impact factor: 94.444

7.  Clathrin coats at 21 A resolution: a cellular assembly designed to recycle multiple membrane receptors.

Authors:  C J Smith; N Grigorieff; B M Pearse
Journal:  EMBO J       Date:  1998-09-01       Impact factor: 11.598

8.  Differential control of clathrin subunit dynamics measured with EW-FRAP microscopy.

Authors:  Dinah Loerke; Martin Wienisch; Olexiy Kochubey; Jurgen Klingauf
Journal:  Traffic       Date:  2005-10       Impact factor: 6.215

Review 9.  The cellular functions of clathrin.

Authors:  S J Royle
Journal:  Cell Mol Life Sci       Date:  2006-08       Impact factor: 9.261

10.  Coupling between clathrin-coated-pit invagination, cortactin recruitment, and membrane scission observed in live cells.

Authors:  Christien J Merrifield; David Perrais; David Zenisek
Journal:  Cell       Date:  2005-05-20       Impact factor: 41.582

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  9 in total

1.  Micellization model for the polymerization of clathrin baskets.

Authors:  M Muthukumar; Ralph Nossal
Journal:  J Chem Phys       Date:  2013-09-28       Impact factor: 3.488

2.  DNA-Origami-Based Fluorescence Brightness Standards for Convenient and Fast Protein Counting in Live Cells.

Authors:  Nathan D Williams; Ane Landajuela; Ravi Kiran Kasula; Wenjiao Zhou; John T Powell; Zhiqun Xi; Farren J Isaacs; Julien Berro; Derek Toomre; Erdem Karatekin; Chenxiang Lin
Journal:  Nano Lett       Date:  2020-11-09       Impact factor: 11.189

3.  Membrane fluctuations destabilize clathrin protein lattice order.

Authors:  Nicholas Cordella; Thomas J Lampo; Shafigh Mehraeen; Andrew J Spakowitz
Journal:  Biophys J       Date:  2014-04-01       Impact factor: 4.033

4.  Clathrin Assembly Regulated by Adaptor Proteins in Coarse-Grained Models.

Authors:  Matteo Giani; Wouter K den Otter; Wim J Briels
Journal:  Biophys J       Date:  2016-07-12       Impact factor: 4.033

5.  NERDSS: A Nonequilibrium Simulator for Multibody Self-Assembly at the Cellular Scale.

Authors:  Matthew J Varga; Yiben Fu; Spencer Loggia; Osman N Yogurtcu; Margaret E Johnson
Journal:  Biophys J       Date:  2020-05-16       Impact factor: 4.033

6.  Unraveling protein-protein interactions in clathrin assemblies via atomic force spectroscopy.

Authors:  Albert J Jin; Eileen M Lafer; Jennifer Q Peng; Paul D Smith; Ralph Nossal
Journal:  Methods       Date:  2012-12-25       Impact factor: 3.608

Review 7.  Getting in touch with the clathrin terminal domain.

Authors:  Sandra K Lemmon; Linton M Traub
Journal:  Traffic       Date:  2012-01-13       Impact factor: 6.215

8.  Large self-assembled clathrin lattices spontaneously disassemble without sufficient adaptor proteins.

Authors:  Si-Kao Guo; Alexander J Sodt; Margaret E Johnson
Journal:  PLoS Comput Biol       Date:  2022-03-21       Impact factor: 4.475

9.  Rule-based modelling provides an extendable framework for comparing candidate mechanisms underpinning clathrin polymerisation.

Authors:  Anatoly Sorokin; Katharina F Heil; J Douglas Armstrong; Oksana Sorokina
Journal:  Sci Rep       Date:  2018-04-04       Impact factor: 4.379

  9 in total

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