Literature DB >> 24089740

Micellization model for the polymerization of clathrin baskets.

M Muthukumar1, Ralph Nossal.   

Abstract

A thermodynamic model is used to investigate the conditions under which clathrin triskelions form polyhedral baskets. The analysis, which is similar to classical methods used to study micelle formation, relates clathrin basket energetics to system parameters linked to triskelial rigidity, the natural curvature of an isolated triskelion, and interactions between triskelial legs in the assembled polyhedra. Mathematical theory predicts that a minimal ("critical") clathrin concentration, C(C), needs to be surpassed in order for basket polymerization to occur, and indicates how C(C), and the amount of polymerized material, depend on the chosen parameters. Analytical expressions are obtained to indicate how changes in the parameters affect the sizes of the polyhedra which arise when the total clathrin concentration exceeds C(C). A continuum analytic approximation then is used to produce numerical results that illustrate the derived dependences.

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Year:  2013        PMID: 24089740      PMCID: PMC3785534          DOI: 10.1063/1.4816634

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  41 in total

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Journal:  Traffic       Date:  2002-08       Impact factor: 6.215

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Journal:  Biochem J       Date:  2004-01-01       Impact factor: 3.857

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Journal:  Proc Natl Acad Sci U S A       Date:  2004-03-08       Impact factor: 11.205

Review 7.  Diversity of clathrin function: new tricks for an old protein.

Authors:  Frances M Brodsky
Journal:  Annu Rev Cell Dev Biol       Date:  2012-07-23       Impact factor: 13.827

8.  Energetics of clathrin basket assembly.

Authors:  R Nossal
Journal:  Traffic       Date:  2001-02       Impact factor: 6.215

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Authors:  A J Jin; R Nossal
Journal:  Biophys J       Date:  2000-03       Impact factor: 4.033

10.  Clathrin exchange during clathrin-mediated endocytosis.

Authors:  X Wu; X Zhao; L Baylor; S Kaushal; E Eisenberg; L E Greene
Journal:  J Cell Biol       Date:  2001-10-15       Impact factor: 10.539

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  5 in total

1.  Perspective: Reaches of chemical physics in biology.

Authors:  Martin Gruebele; D Thirumalai
Journal:  J Chem Phys       Date:  2013-09-28       Impact factor: 3.488

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Journal:  Biophys J       Date:  2014-04-01       Impact factor: 4.033

3.  Clathrin Assembly Regulated by Adaptor Proteins in Coarse-Grained Models.

Authors:  Matteo Giani; Wouter K den Otter; Wim J Briels
Journal:  Biophys J       Date:  2016-07-12       Impact factor: 4.033

4.  Large self-assembled clathrin lattices spontaneously disassemble without sufficient adaptor proteins.

Authors:  Si-Kao Guo; Alexander J Sodt; Margaret E Johnson
Journal:  PLoS Comput Biol       Date:  2022-03-21       Impact factor: 4.475

5.  Rule-based modelling provides an extendable framework for comparing candidate mechanisms underpinning clathrin polymerisation.

Authors:  Anatoly Sorokin; Katharina F Heil; J Douglas Armstrong; Oksana Sorokina
Journal:  Sci Rep       Date:  2018-04-04       Impact factor: 4.379

  5 in total

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