Literature DB >> 27410749

Clathrin Assembly Regulated by Adaptor Proteins in Coarse-Grained Models.

Matteo Giani1, Wouter K den Otter2, Wim J Briels3.   

Abstract

The assembly of clathrin triskelia into polyhedral cages during endocytosis is regulated by adaptor proteins (APs). We explore how APs achieve this by developing coarse-grained models for clathrin and AP2, employing a Monte Carlo click interaction, to simulate their collective aggregation behavior. The phase diagrams indicate that a crucial role is played by the mechanical properties of the disordered linker segment of AP. We also present a statistical-mechanical theory for the assembly behavior of clathrin, yielding good agreement with our simulations and experimental data from the literature. Adaptor proteins are found to regulate the formation of clathrin coats under certain conditions, but can also suppress the formation of cages.
Copyright © 2016 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2016        PMID: 27410749      PMCID: PMC4944722          DOI: 10.1016/j.bpj.2016.06.003

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  47 in total

Review 1.  Clathrin coat construction in endocytosis.

Authors:  B M Pearse; C J Smith; D J Owen
Journal:  Curr Opin Struct Biol       Date:  2000-04       Impact factor: 6.809

2.  Complete reconstitution of clathrin basket formation with recombinant protein fragments: adaptor control of clathrin self-assembly.

Authors:  B Greene; S H Liu; A Wilde; F M Brodsky
Journal:  Traffic       Date:  2000-01       Impact factor: 6.215

Review 3.  Biological basket weaving: formation and function of clathrin-coated vesicles.

Authors:  F M Brodsky; C Y Chen; C Knuehl; M C Towler; D E Wakeham
Journal:  Annu Rev Cell Dev Biol       Date:  2001       Impact factor: 13.827

4.  Nonuniversal critical dynamics in Monte Carlo simulations.

Authors: 
Journal:  Phys Rev Lett       Date:  1987-01-12       Impact factor: 9.161

Review 5.  Cargo recognition in clathrin-mediated endocytosis.

Authors:  Linton M Traub; Juan S Bonifacino
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-11-01       Impact factor: 10.005

6.  The generation of curved clathrin coats from flat plaques.

Authors:  Wouter K den Otter; Wim J Briels
Journal:  Traffic       Date:  2011-07-24       Impact factor: 6.215

7.  Key interactions for clathrin coat stability.

Authors:  Till Böcking; François Aguet; Iris Rapoport; Manuel Banzhaf; Anan Yu; Jean Christophe Zeeh; Tom Kirchhausen
Journal:  Structure       Date:  2014-05-08       Impact factor: 5.006

Review 8.  Focusing on clathrin-mediated endocytosis.

Authors:  Joshua Z Rappoport
Journal:  Biochem J       Date:  2008-06-15       Impact factor: 3.857

Review 9.  Clathrin adaptors really adapt.

Authors:  Tom Kirchhausen
Journal:  Cell       Date:  2002-05-17       Impact factor: 41.582

10.  Assembly polypeptides from coated vesicles mediate reassembly of unique clathrin coats.

Authors:  S Zaremba; J H Keen
Journal:  J Cell Biol       Date:  1983-11       Impact factor: 10.539

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  5 in total

1.  Entry modes of ellipsoidal nanoparticles on a membrane during clathrin-mediated endocytosis.

Authors:  Hua Deng; Prashanta Dutta; Jin Liu
Journal:  Soft Matter       Date:  2019-06-26       Impact factor: 3.679

Review 2.  Dynamic interplay between cell membrane tension and clathrin-mediated endocytosis.

Authors:  Umidahan Djakbarova; Yasaman Madraki; Emily T Chan; Cömert Kural
Journal:  Biol Cell       Date:  2021-04-28       Impact factor: 4.458

3.  Shape selection and mis-assembly in viral capsid formation by elastic frustration.

Authors:  Carlos I Mendoza; David Reguera
Journal:  Elife       Date:  2020-04-21       Impact factor: 8.140

4.  Large self-assembled clathrin lattices spontaneously disassemble without sufficient adaptor proteins.

Authors:  Si-Kao Guo; Alexander J Sodt; Margaret E Johnson
Journal:  PLoS Comput Biol       Date:  2022-03-21       Impact factor: 4.475

5.  A Novel Sequence in AP180 and CALM Promotes Efficient Clathrin Binding and Assembly.

Authors:  Lia Moshkanbaryans; Jing Xue; Jesse Ray Wark; Phillip James Robinson; Mark Evan Graham
Journal:  PLoS One       Date:  2016-08-30       Impact factor: 3.240

  5 in total

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