Literature DB >> 20705899

Fast live simultaneous multiwavelength four-dimensional optical microscopy.

Peter M Carlton1, Jérôme Boulanger, Charles Kervrann, Jean-Baptiste Sibarita, Jean Salamero, Susannah Gordon-Messer, Debra Bressan, James E Haber, Sebastian Haase, Lin Shao, Lukman Winoto, Atsushi Matsuda, Peter Kner, Satoru Uzawa, Mats Gustafsson, Zvi Kam, David A Agard, John W Sedat.   

Abstract

Live fluorescence microscopy has the unique capability to probe dynamic processes, linking molecular components and their localization with function. A key goal of microscopy is to increase spatial and temporal resolution while simultaneously permitting identification of multiple specific components. We demonstrate a new microscope platform, OMX, that enables subsecond, multicolor four-dimensional data acquisition and also provides access to subdiffraction structured illumination imaging. Using this platform to image chromosome movement during a complete yeast cell cycle at one 3D image stack per second reveals an unexpected degree of photosensitivity of fluorophore-containing cells. To avoid perturbation of cell division, excitation levels had to be attenuated between 100 and 10,000× below the level normally used for imaging. We show that an image denoising algorithm that exploits redundancy in the image sequence over space and time allows recovery of biological information from the low light level noisy images while maintaining full cell viability with no fading.

Entities:  

Mesh:

Year:  2010        PMID: 20705899      PMCID: PMC2941331          DOI: 10.1073/pnas.1004037107

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  11 in total

Review 1.  A guide to choosing fluorescent proteins.

Authors:  Nathan C Shaner; Paul A Steinbach; Roger Y Tsien
Journal:  Nat Methods       Date:  2005-12       Impact factor: 28.547

2.  Space-time adaptation for patch-based image sequence restoration.

Authors:  Jérôme Boulanger; Charles Kervrann; Patrick Bouthemy
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2007-06       Impact factor: 6.226

3.  Patch-based nonlocal functional for denoising fluorescence microscopy image sequences.

Authors:  Jérôme Boulanger; Charles Kervrann; Patrick Bouthemy; Peter Elbau; Jean-Baptiste Sibarita; Jean Salamero
Journal:  IEEE Trans Med Imaging       Date:  2009-11-06       Impact factor: 10.048

4.  Spatial dynamics of GFP-tagged proteins investigated by local fluorescence enhancement.

Authors:  H Yokoe; T Meyer
Journal:  Nat Biotechnol       Date:  1996-10       Impact factor: 54.908

5.  GFP tagging of budding yeast chromosomes reveals that protein-protein interactions can mediate sister chromatid cohesion.

Authors:  A F Straight; A S Belmont; C C Robinett; A W Murray
Journal:  Curr Biol       Date:  1996-12-01       Impact factor: 10.834

6.  Phosphatidylinositol(3)-phosphate signaling mediated by specific binding to RING FYVE domains.

Authors:  C G Burd; S D Emr
Journal:  Mol Cell       Date:  1998-07       Impact factor: 17.970

Review 7.  Oxidative stress responses of the yeast Saccharomyces cerevisiae.

Authors:  D J Jamieson
Journal:  Yeast       Date:  1998-12       Impact factor: 3.239

8.  The RAD9 gene controls the cell cycle response to DNA damage in Saccharomyces cerevisiae.

Authors:  T A Weinert; L H Hartwell
Journal:  Science       Date:  1988-07-15       Impact factor: 47.728

9.  The C. elegans hook protein, ZYG-12, mediates the essential attachment between the centrosome and nucleus.

Authors:  Christian J Malone; Lisa Misner; Nathalie Le Bot; Miao-Chih Tsai; Jay M Campbell; Julie Ahringer; John G White
Journal:  Cell       Date:  2003-12-26       Impact factor: 41.582

10.  Molecular characterization of the male-specific lethal-3 gene and investigations of the regulation of dosage compensation in Drosophila.

Authors:  M Gorman; A Franke; B S Baker
Journal:  Development       Date:  1995-02       Impact factor: 6.868

View more
  64 in total

1.  A CANDLE for a deeper in vivo insight.

Authors:  Pierrick Coupé; Martin Munz; Jose V Manjón; Edward S Ruthazer; D Louis Collins
Journal:  Med Image Anal       Date:  2012-01-18       Impact factor: 8.545

2.  Advanced hardware and software tools for fast multidimensional imaging of living cells.

Authors:  Jason R Swedlow
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-31       Impact factor: 11.205

3.  Seeing more with less.

Authors:  Monya Baker
Journal:  Nat Methods       Date:  2010-10       Impact factor: 28.547

4.  High-resolution restoration of 3D structures from widefield images with extreme low signal-to-noise-ratio.

Authors:  Muthuvel Arigovindan; Jennifer C Fung; Daniel Elnatan; Vito Mennella; Yee-Hung Mark Chan; Michael Pollard; Eric Branlund; John W Sedat; David A Agard
Journal:  Proc Natl Acad Sci U S A       Date:  2013-10-08       Impact factor: 11.205

5.  Imaging Polarization in Budding Yeast.

Authors:  Allison W McClure; Chi-Fang Wu; Sam A Johnson; Daniel J Lew
Journal:  Methods Mol Biol       Date:  2016

6.  The conserved GTPase Gem1 regulates endoplasmic reticulum-mitochondria connections.

Authors:  Benoît Kornmann; Christof Osman; Peter Walter
Journal:  Proc Natl Acad Sci U S A       Date:  2011-08-08       Impact factor: 11.205

7.  Single-Molecule Tracking and Its Application in Biomolecular Binding Detection.

Authors:  Cong Liu; Yen-Liang Liu; Evan P Perillo; Andrew K Dunn; Hsin-Chih Yeh
Journal:  IEEE J Sel Top Quantum Electron       Date:  2016-05-17       Impact factor: 4.544

8.  Joint volumetric extraction and enhancement of vasculature from low-SNR 3-D fluorescence microscopy images.

Authors:  Sepideh Almasi; Ayal Ben-Zvi; Baptiste Lacoste; Chenghua Gu; Eric L Miller; Xiaoyin Xu
Journal:  Pattern Recognit       Date:  2016-09-22       Impact factor: 7.740

Review 9.  Faster fluorescence microscopy: advances in high speed biological imaging.

Authors:  Peter W Winter; Hari Shroff
Journal:  Curr Opin Chem Biol       Date:  2014-05-09       Impact factor: 8.822

10.  Comparing phototoxicity during the development of a zebrafish craniofacial bone using confocal and light sheet fluorescence microscopy techniques.

Authors:  Matthew Jemielita; Michael J Taormina; April Delaurier; Charles B Kimmel; Raghuveer Parthasarathy
Journal:  J Biophotonics       Date:  2012-12-14       Impact factor: 3.207

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.