Literature DB >> 20678942

Electron cryomicroscopy of membrane proteins: specimen preparation for two-dimensional crystals and single particles.

Ingeborg Schmidt-Krey1, John L Rubinstein.   

Abstract

Membrane protein structure and function can be studied by two powerful and highly complementary electron cryomicroscopy (cryo-EM) methods: electron crystallography of two-dimensional (2D) crystals and single particle analysis of detergent-solubilized protein complexes. To obtain the highest-possible resolution data from membrane proteins, whether prepared as 2D crystals or single particles, cryo-EM samples must be vitrified with great care. Grid preparation for cryo-EM of 2D crystals is possible by back-injection, the carbon sandwich technique, drying in sugars before cooling in the electron microscope, or plunge-freezing. Specimen grids for single particle cryo-EM studies of membrane proteins are usually produced by plunge-freezing protein solutions, supported either by perforated or a continuous carbon film substrate. This review outlines the different techniques available and the suitability of each method for particular samples and studies. Experimental considerations in sample preparation and preservation include the protein itself and the presence of lipid or detergent. The appearance of cryo-EM samples in different conditions is also discussed.
Copyright © 2010 Elsevier Ltd. All rights reserved.

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Year:  2010        PMID: 20678942      PMCID: PMC2995848          DOI: 10.1016/j.micron.2010.07.004

Source DB:  PubMed          Journal:  Micron        ISSN: 0968-4328            Impact factor:   2.251


  80 in total

1.  High-resolution electron crystallography of light-harvesting chlorophyll a/b-protein complex in three different media.

Authors:  D N Wang; W Kühlbrandt
Journal:  J Mol Biol       Date:  1991-02-20       Impact factor: 5.469

2.  Refined structure of the nicotinic acetylcholine receptor at 4A resolution.

Authors:  Nigel Unwin
Journal:  J Mol Biol       Date:  2005-01-25       Impact factor: 5.469

3.  Two-dimensional structure of plant light-harvesting complex at 3.7 A [corrected] resolution by electron crystallography.

Authors:  W Kühlbrandt; K H Downing
Journal:  J Mol Biol       Date:  1989-06-20       Impact factor: 5.469

4.  Electron diffraction of frozen, hydrated protein crystals.

Authors:  K A Taylor; R M Glaeser
Journal:  Science       Date:  1974-12-13       Impact factor: 47.728

5.  Improvement in high resolution image quality of radiation-sensitive specimens achieved with reduced spot size of the electron beam.

Authors:  K H Downing; R M Glaeser
Journal:  Ultramicroscopy       Date:  1986       Impact factor: 2.689

6.  Structure of the rotor ring of F-Type Na+-ATPase from Ilyobacter tartaricus.

Authors:  Thomas Meier; Patrick Polzer; Kay Diederichs; Wolfram Welte; Peter Dimroth
Journal:  Science       Date:  2005-04-29       Impact factor: 47.728

7.  Following the formation of supported lipid bilayers on mica: a study combining AFM, QCM-D, and ellipsometry.

Authors:  Ralf P Richter; Alain R Brisson
Journal:  Biophys J       Date:  2005-02-24       Impact factor: 4.033

8.  Application of nonionic polyoxyethylene detergents in studies of phosphatidylinositol kinase.

Authors:  B R Ganong; C M Lu
Journal:  Anal Biochem       Date:  1989-05-15       Impact factor: 3.365

9.  Model for the structure of bacteriorhodopsin based on high-resolution electron cryo-microscopy.

Authors:  R Henderson; J M Baldwin; T A Ceska; F Zemlin; E Beckmann; K H Downing
Journal:  J Mol Biol       Date:  1990-06-20       Impact factor: 5.469

10.  Two-dimensional crystallization technique for imaging macromolecules, with application to antigen--antibody--complement complexes.

Authors:  E E Uzgiris; R D Kornberg
Journal:  Nature       Date:  1983-01-13       Impact factor: 49.962

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  11 in total

1.  Assessing two-dimensional crystallization trials of small membrane proteins for structural biology studies by electron crystallography.

Authors:  Matthew C Johnson; Frederik Rudolph; Tina M Dreaden; Gengxiang Zhao; Bridgette A Barry; Ingeborg Schmidt-Krey
Journal:  J Vis Exp       Date:  2010-10-29       Impact factor: 1.355

Review 2.  Lipid environment of membrane proteins in cryo-EM based structural analysis.

Authors:  Kazuhiro Mio; Chikara Sato
Journal:  Biophys Rev       Date:  2017-12-18

Review 3.  Sensitivity of peripheral membrane proteins to the membrane context: A case study of phosphatidylserine and the TIM proteins.

Authors:  Daniel Kerr; Gregory T Tietjen; Zhiliang Gong; Emad Tajkhorshid; Erin J Adams; Ka Yee C Lee
Journal:  Biochim Biophys Acta Biomembr       Date:  2018-06-18       Impact factor: 3.747

Review 4.  Membrane mimetic systems in CryoEM: keeping membrane proteins in their native environment.

Authors:  Henriette E Autzen; David Julius; Yifan Cheng
Journal:  Curr Opin Struct Biol       Date:  2019-07-03       Impact factor: 6.809

Review 5.  Emerging methodologies to investigate lipid-protein interactions.

Authors:  Jordan L Scott; Catherine A Musselman; Emmanuel Adu-Gyamfi; Tatiana G Kutateladze; Robert V Stahelin
Journal:  Integr Biol (Camb)       Date:  2012-02-10       Impact factor: 2.192

6.  Transport and trapping of nanosheets via hydrodynamic forces and curvature-induced capillary quadrupolar interactions.

Authors:  Timothy J Lee; Colby F Lewallen; Daniel J Bumbarger; Peter J Yunker; R Clay Reid; Craig R Forest
Journal:  J Colloid Interface Sci       Date:  2018-07-18       Impact factor: 8.128

7.  Cryo-EM grid optimization for membrane proteins.

Authors:  Domen Kampjut; Julia Steiner; Leonid A Sazanov
Journal:  iScience       Date:  2021-02-05

Review 8.  Fake It 'Till You Make It-The Pursuit of Suitable Membrane Mimetics for Membrane Protein Biophysics.

Authors:  Johannes Thoma; Björn M Burmann
Journal:  Int J Mol Sci       Date:  2020-12-23       Impact factor: 5.923

Review 9.  Two-Dimensional Crystallization Procedure, from Protein Expression to Sample Preparation.

Authors:  Qie Kuang; Pasi Purhonen; Hans Hebert
Journal:  Biomed Res Int       Date:  2015-08-27       Impact factor: 3.411

Review 10.  Cryo-EM studies of the rotary H+-ATPase/synthase from Thermus thermophilus.

Authors:  Atsuko Nakanishi; Jun-Ichi Kishikawa; Kaoru Mitsuoka; Ken Yokoyama
Journal:  Biophys Physicobiol       Date:  2019-09-03
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