Literature DB >> 20668032

Characterization of EMU, the Arabidopsis homolog of the yeast THO complex member HPR1.

Chihiro Furumizu1, Hirokazu Tsukaya, Yoshibumi Komeda.   

Abstract

Diverse and precise control is essential for eukaryotic gene expression. This is accomplished through the recruitment of a myriad of proteins to a nascent messenger RNA (mRNA) to mediate modifications, such as capping, splicing, 3'-end processing, and export. Despite being important for every cell, however, the mechanism by which the formation of diverse messenger ribonucleoprotein (mRNP) particles contributes to maintaining intricate systems in the multicellular organism remains incompletely defined. We identified and characterized a mutant gene named erecta mRNA under-expressed (emu) that leads to the defective mRNA accumulation of ERECTA, a developmental regulator in the model plant Arabidopsis thaliana. EMU encodes a protein homologous to a component of the THO complex that is required for the generation of functional mRNPs. Further analysis suggested that EMU is genetically associated with SERRATE, HYPONASTIC LEAVES1, and ARGONAUTE1, which are required for proper RNA maturation or action. Furthermore, mutations in another THO-related gene led to embryonic lethality. These findings support the presence and importance of the THO-related complex in plants as well as yeast and vertebrates.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 20668032      PMCID: PMC2924540          DOI: 10.1261/rna.2265710

Source DB:  PubMed          Journal:  RNA        ISSN: 1355-8382            Impact factor:   4.942


  69 in total

1.  MicroRNA genes are transcribed by RNA polymerase II.

Authors:  Yoontae Lee; Minju Kim; Jinju Han; Kyu-Hyun Yeom; Sanghyuk Lee; Sung Hee Baek; V Narry Kim
Journal:  EMBO J       Date:  2004-09-16       Impact factor: 11.598

2.  SERRATE: a new player on the plant microRNA scene.

Authors:  Dajana Lobbes; Ghanasyam Rallapalli; Dominik D Schmidt; Cathie Martin; Jonathan Clarke
Journal:  EMBO Rep       Date:  2006-09-15       Impact factor: 8.807

3.  Alternative splicing of pre-mRNAs of Arabidopsis serine/arginine-rich proteins: regulation by hormones and stresses.

Authors:  Saiprasad Goud Palusa; Gul Shad Ali; Anireddy S N Reddy
Journal:  Plant J       Date:  2007-02-22       Impact factor: 6.417

4.  Ars2 links the nuclear cap-binding complex to RNA interference and cell proliferation.

Authors:  Joshua J Gruber; D Steven Zatechka; Leah R Sabin; Jeongsik Yong; Julian J Lum; Mei Kong; Wei-Xing Zong; Zhenxi Zhang; Chi-Kong Lau; Jason Rawlings; Sara Cherry; James N Ihle; Gideon Dreyfuss; Craig B Thompson
Journal:  Cell       Date:  2009-07-23       Impact factor: 41.582

5.  HPR1, a novel yeast gene that prevents intrachromosomal excision recombination, shows carboxy-terminal homology to the Saccharomyces cerevisiae TOP1 gene.

Authors:  A Aguilera; H L Klein
Journal:  Mol Cell Biol       Date:  1990-04       Impact factor: 4.272

6.  The nuclear export receptor XPO-1 supports primary miRNA processing in C. elegans and Drosophila.

Authors:  Ingo Büssing; Jr-Shiuan Yang; Eric C Lai; Helge Grosshans
Journal:  EMBO J       Date:  2010-04-30       Impact factor: 11.598

7.  Genome-wide analysis of mRNAs regulated by the THO complex in Drosophila melanogaster.

Authors:  Jan Rehwinkel; Andrea Herold; Kerstin Gari; Thomas Köcher; Michaela Rode; Francesca L Ciccarelli; Matthias Wilm; Elisa Izaurralde
Journal:  Nat Struct Mol Biol       Date:  2004-05-09       Impact factor: 15.369

8.  Genome-wide insertional mutagenesis of Arabidopsis thaliana.

Authors:  José M Alonso; Anna N Stepanova; Thomas J Leisse; Christopher J Kim; Huaming Chen; Paul Shinn; Denise K Stevenson; Justin Zimmerman; Pascual Barajas; Rosa Cheuk; Carmelita Gadrinab; Collen Heller; Albert Jeske; Eric Koesema; Cristina C Meyers; Holly Parker; Lance Prednis; Yasser Ansari; Nathan Choy; Hashim Deen; Michael Geralt; Nisha Hazari; Emily Hom; Meagan Karnes; Celene Mulholland; Ral Ndubaku; Ian Schmidt; Plinio Guzman; Laura Aguilar-Henonin; Markus Schmid; Detlef Weigel; David E Carter; Trudy Marchand; Eddy Risseeuw; Debra Brogden; Albana Zeko; William L Crosby; Charles C Berry; Joseph R Ecker
Journal:  Science       Date:  2003-08-01       Impact factor: 47.728

9.  The RNA-binding proteins HYL1 and SE promote accurate in vitro processing of pri-miRNA by DCL1.

Authors:  Zhicheng Dong; Meng-Hsuan Han; Nina Fedoroff
Journal:  Proc Natl Acad Sci U S A       Date:  2008-07-16       Impact factor: 11.205

10.  Lesions in the mRNA cap-binding gene ABA HYPERSENSITIVE 1 suppress FRIGIDA-mediated delayed flowering in Arabidopsis.

Authors:  Isabel C Bezerra; Scott D Michaels; Fritz M Schomburg; Richard M Amasino
Journal:  Plant J       Date:  2004-10       Impact factor: 6.417

View more
  25 in total

1.  The Arabidopsis nuclear pore and nuclear envelope.

Authors:  Iris Meier; Jelena Brkljacic
Journal:  Arabidopsis Book       Date:  2010-10-07

2.  The THO ribonucleoprotein complex is required for stem cell homeostasis in the adult mouse small intestine.

Authors:  Laura Pitzonka; Xiaoling Wang; Sumana Ullas; David W Wolff; Yanqing Wang; David W Goodrich
Journal:  Mol Cell Biol       Date:  2013-07-01       Impact factor: 4.272

3.  The presence of multiple introns is essential for ERECTA expression in Arabidopsis.

Authors:  Rucha Karve; Wusheng Liu; Spencer G Willet; Keiko U Torii; Elena D Shpak
Journal:  RNA       Date:  2011-08-31       Impact factor: 4.942

Review 4.  Regulation of pri-MIRNA processing: mechanistic insights into the miRNA homeostasis in plant.

Authors:  Jayanti Jodder
Journal:  Plant Cell Rep       Date:  2021-01-16       Impact factor: 4.570

5.  New Arabidopsis thaliana cytochrome c partners: a look into the elusive role of cytochrome c in programmed cell death in plants.

Authors:  Jonathan Martínez-Fábregas; Irene Díaz-Moreno; Katiuska González-Arzola; Simon Janocha; José A Navarro; Manuel Hervás; Rita Bernhardt; Antonio Díaz-Quintana; Miguel Á De la Rosa
Journal:  Mol Cell Proteomics       Date:  2013-09-09       Impact factor: 5.911

6.  The THO/TREX Complex Active in miRNA Biogenesis Negatively Regulates Root-Associated Acid Phosphatase Activity Induced by Phosphate Starvation.

Authors:  Sibo Tao; Ye Zhang; Xiaoyue Wang; Le Xu; Xiaofeng Fang; Zhi John Lu; Dong Liu
Journal:  Plant Physiol       Date:  2016-06-21       Impact factor: 8.340

7.  The Arabidopsis MOS4-Associated Complex Promotes MicroRNA Biogenesis and Precursor Messenger RNA Splicing.

Authors:  Tianran Jia; Bailong Zhang; Chenjiang You; Yong Zhang; Liping Zeng; Shengjun Li; Kaeli C M Johnson; Bin Yu; Xin Li; Xuemei Chen
Journal:  Plant Cell       Date:  2017-09-25       Impact factor: 11.277

Review 8.  The 'how' and 'where' of plant microRNAs.

Authors:  Yu Yu; Tianran Jia; Xuemei Chen
Journal:  New Phytol       Date:  2017-10-19       Impact factor: 10.151

9.  LSM proteins provide accurate splicing and decay of selected transcripts to ensure normal Arabidopsis development.

Authors:  Carlos Perea-Resa; Tamara Hernández-Verdeja; Rosa López-Cobollo; María del Mar Castellano; Julio Salinas
Journal:  Plant Cell       Date:  2012-12-07       Impact factor: 11.277

10.  Arabidopsis proline-rich protein important for development and abiotic stress tolerance is involved in microRNA biogenesis.

Authors:  Xiangqiang Zhan; Bangshing Wang; Hongjiang Li; Renyi Liu; Rajwant K Kalia; Jian-Kang Zhu; Viswanathan Chinnusamy
Journal:  Proc Natl Acad Sci U S A       Date:  2012-10-15       Impact factor: 11.205

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.