Literature DB >> 12893945

Genome-wide insertional mutagenesis of Arabidopsis thaliana.

José M Alonso1, Anna N Stepanova, Thomas J Leisse, Christopher J Kim, Huaming Chen, Paul Shinn, Denise K Stevenson, Justin Zimmerman, Pascual Barajas, Rosa Cheuk, Carmelita Gadrinab, Collen Heller, Albert Jeske, Eric Koesema, Cristina C Meyers, Holly Parker, Lance Prednis, Yasser Ansari, Nathan Choy, Hashim Deen, Michael Geralt, Nisha Hazari, Emily Hom, Meagan Karnes, Celene Mulholland, Ral Ndubaku, Ian Schmidt, Plinio Guzman, Laura Aguilar-Henonin, Markus Schmid, Detlef Weigel, David E Carter, Trudy Marchand, Eddy Risseeuw, Debra Brogden, Albana Zeko, William L Crosby, Charles C Berry, Joseph R Ecker.   

Abstract

Over 225,000 independent Agrobacterium transferred DNA (T-DNA) insertion events in the genome of the reference plant Arabidopsis thaliana have been created that represent near saturation of the gene space. The precise locations were determined for more than 88,000 T-DNA insertions, which resulted in the identification of mutations in more than 21,700 of the approximately 29,454 predicted Arabidopsis genes. Genome-wide analysis of the distribution of integration events revealed the existence of a large integration site bias at both the chromosome and gene levels. Insertion mutations were identified in genes that are regulated in response to the plant hormone ethylene.

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Year:  2003        PMID: 12893945     DOI: 10.1126/science.1086391

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  2000 in total

1.  Characterization of filament-forming CTP synthases from Arabidopsis thaliana.

Authors:  Manuel Daumann; Daniel Hickl; David Zimmer; Rachael A DeTar; Hans-Henning Kunz; Torsten Möhlmann
Journal:  Plant J       Date:  2018-08-31       Impact factor: 6.417

2.  A bifunctional locus (BIO3-BIO1) required for biotin biosynthesis in Arabidopsis.

Authors:  Rosanna Muralla; Elve Chen; Colleen Sweeney; Jennifer A Gray; Allan Dickerman; Basil J Nikolau; David Meinke
Journal:  Plant Physiol       Date:  2007-11-09       Impact factor: 8.340

3.  Subcellular co-localization of Arabidopsis RTE1 and ETR1 supports a regulatory role for RTE1 in ETR1 ethylene signaling.

Authors:  Chun-Hai Dong; Maximo Rivarola; Josephine S Resnick; Benjamin D Maggin; Caren Chang
Journal:  Plant J       Date:  2007-11-12       Impact factor: 6.417

4.  A versatile transposon-based activation tag vector system for functional genomics in cereals and other monocot plants.

Authors:  Shaohong Qu; Aparna Desai; Rod Wing; Venkatesan Sundaresan
Journal:  Plant Physiol       Date:  2007-11-09       Impact factor: 8.340

5.  ABA-insensitive3, ABA-insensitive5, and DELLAs Interact to activate the expression of SOMNUS and other high-temperature-inducible genes in imbibed seeds in Arabidopsis.

Authors:  Soohwan Lim; Jeongmoo Park; Nayoung Lee; Jinkil Jeong; Shigeo Toh; Asuka Watanabe; Junghyun Kim; Hyojin Kang; Dong Hwan Kim; Naoto Kawakami; Giltsu Choi
Journal:  Plant Cell       Date:  2013-12-10       Impact factor: 11.277

6.  APETALA2 negatively regulates multiple floral organ identity genes in Arabidopsis by recruiting the co-repressor TOPLESS and the histone deacetylase HDA19.

Authors:  Naden T Krogan; Kendra Hogan; Jeff A Long
Journal:  Development       Date:  2012-10-03       Impact factor: 6.868

7.  AtPRD1 is required for meiotic double strand break formation in Arabidopsis thaliana.

Authors:  Arnaud De Muyt; Daniel Vezon; Ghislaine Gendrot; Jean-Luc Gallois; Rebecca Stevens; Mathilde Grelon
Journal:  EMBO J       Date:  2007-08-30       Impact factor: 11.598

8.  The low-oxygen-induced NAC domain transcription factor ANAC102 affects viability of Arabidopsis seeds following low-oxygen treatment.

Authors:  Jed A Christianson; Iain W Wilson; Danny J Llewellyn; Elizabeth S Dennis
Journal:  Plant Physiol       Date:  2009-01-28       Impact factor: 8.340

9.  Nitrate efflux at the root plasma membrane: identification of an Arabidopsis excretion transporter.

Authors:  Cécile Segonzac; Jean-Christophe Boyer; Emilie Ipotesi; Wojciech Szponarski; Pascal Tillard; Brigitte Touraine; Nicolas Sommerer; Michel Rossignol; Rémy Gibrat
Journal:  Plant Cell       Date:  2007-11-09       Impact factor: 11.277

10.  Arabidopsis FIERY1, XRN2, and XRN3 are endogenous RNA silencing suppressors.

Authors:  Isabelle Gy; Virginie Gasciolli; Dominique Lauressergues; Jean-Benoit Morel; Julie Gombert; Florence Proux; Caroline Proux; Hervé Vaucheret; Allison C Mallory
Journal:  Plant Cell       Date:  2007-11-09       Impact factor: 11.277

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