Literature DB >> 20667607

Recent advances in the photochemical control of protein function.

Chad W Riggsbee1, Alexander Deiters.   

Abstract

Biological processes are regulated with a high level of spatial and temporal resolution. To understand and manipulate these processes, scientists need to be able to regulate them with Nature's level of precision. In this context, light is a unique regulatory element because it can be precisely controlled in terms of location, timing and amplitude. Moreover, most biological laboratories have a wide range of light sources as standard equipment. This review article summarizes the most recent advances in light-mediated regulation of protein function and its application in a cellular context. Specifically, the photocaging of small-molecule modulators of protein function and of specific amino acid residues in proteins is discussed. In addition, examples of the photochemical control of protein function through the application of genetically engineered natural-light receptors are presented. Copyright 2010 Elsevier Ltd. All rights reserved.

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Year:  2010        PMID: 20667607      PMCID: PMC2926219          DOI: 10.1016/j.tibtech.2010.06.001

Source DB:  PubMed          Journal:  Trends Biotechnol        ISSN: 0167-7799            Impact factor:   19.536


  57 in total

1.  Light-activated Cre recombinase as a tool for the spatial and temporal control of gene function in mammalian cells.

Authors:  Wesleigh F Edwards; Douglas D Young; Alexander Deiters
Journal:  ACS Chem Biol       Date:  2009-06-19       Impact factor: 5.100

2.  Reversible light switching of cell signalling by genetically encoded protein dimerization.

Authors:  Wesleigh E Georgianna; Alexander Deiters
Journal:  Chembiochem       Date:  2010-02-15       Impact factor: 3.164

3.  A light-activated DNA polymerase.

Authors:  Chungjung Chou; Douglas D Young; Alexander Deiters
Journal:  Angew Chem Int Ed Engl       Date:  2009       Impact factor: 15.336

4.  Differential regulation of protrusion and polarity by PI3K during neutrophil motility in live zebrafish.

Authors:  Sa Kan Yoo; Qing Deng; Peter J Cavnar; Yi I Wu; Klaus M Hahn; Anna Huttenlocher
Journal:  Dev Cell       Date:  2010-02-16       Impact factor: 12.270

Review 5.  Illuminating the chemistry of life: design, synthesis, and applications of "caged" and related photoresponsive compounds.

Authors:  Hsien-Ming Lee; Daniel R Larson; David S Lawrence
Journal:  ACS Chem Biol       Date:  2009-06-19       Impact factor: 5.100

Review 6.  Light activation as a method of regulating and studying gene expression.

Authors:  Alexander Deiters
Journal:  Curr Opin Chem Biol       Date:  2009-10-24       Impact factor: 8.822

7.  Doxycycline-dependent photoactivated gene expression in eukaryotic systems.

Authors:  Sidney B Cambridge; Daniel Geissler; Federico Calegari; Konstantinos Anastassiadis; Mazahir T Hasan; A Francis Stewart; Wieland B Huttner; Volker Hagen; Tobias Bonhoeffer
Journal:  Nat Methods       Date:  2009-06-07       Impact factor: 28.547

8.  Principles and applications of the photochemical control of cellular processes.

Authors:  Alexander Deiters
Journal:  Chembiochem       Date:  2010-01-04       Impact factor: 3.164

9.  A genetically encoded photoactivatable Rac controls the motility of living cells.

Authors:  Yi I Wu; Daniel Frey; Oana I Lungu; Angelika Jaehrig; Ilme Schlichting; Brian Kuhlman; Klaus M Hahn
Journal:  Nature       Date:  2009-08-19       Impact factor: 49.962

10.  Spatiotemporal control of cell signalling using a light-switchable protein interaction.

Authors:  Anselm Levskaya; Orion D Weiner; Wendell A Lim; Christopher A Voigt
Journal:  Nature       Date:  2009-09-13       Impact factor: 49.962

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  43 in total

Review 1.  Chemical tools for studying directed cell migration.

Authors:  Brenda N Goguen; Barbara Imperiali
Journal:  ACS Chem Biol       Date:  2011-10-20       Impact factor: 5.100

2.  Optogenetic engineering: light-directed cell motility.

Authors:  Robert M Hughes; David S Lawrence
Journal:  Angew Chem Int Ed Engl       Date:  2014-08-25       Impact factor: 15.336

3.  Optical Control of CRISPR/Cas9 Gene Editing.

Authors:  James Hemphill; Erin K Borchardt; Kalyn Brown; Aravind Asokan; Alexander Deiters
Journal:  J Am Chem Soc       Date:  2015-04-23       Impact factor: 15.419

4.  Palladium-triggered deprotection chemistry for protein activation in living cells.

Authors:  Jie Li; Juntao Yu; Jingyi Zhao; Jie Wang; Siqi Zheng; Shixian Lin; Long Chen; Maiyun Yang; Shang Jia; Xiaoyu Zhang; Peng R Chen
Journal:  Nat Chem       Date:  2014-03-16       Impact factor: 24.427

Review 5.  Photoremovable protecting groups in chemistry and biology: reaction mechanisms and efficacy.

Authors:  Petr Klán; Tomáš Šolomek; Christian G Bochet; Aurélien Blanc; Richard Givens; Marina Rubina; Vladimir Popik; Alexey Kostikov; Jakob Wirz
Journal:  Chem Rev       Date:  2012-12-21       Impact factor: 60.622

6.  Light-activated gene editing with a photocaged zinc-finger nuclease.

Authors:  Chungjung Chou; Alexander Deiters
Journal:  Angew Chem Int Ed Engl       Date:  2011-06-10       Impact factor: 15.336

7.  Photocaged permeability: a new strategy for controlled drug release.

Authors:  M Michael Dcona; Deboleena Mitra; Rachel W Goehe; David A Gewirtz; Deborah A Lebman; Matthew C T Hartman
Journal:  Chem Commun (Camb)       Date:  2012-04-04       Impact factor: 6.222

Review 8.  Optobiology: optical control of biological processes via protein engineering.

Authors:  Benjamin Kim; Michael Z Lin
Journal:  Biochem Soc Trans       Date:  2013-10       Impact factor: 5.407

9.  Computational Design of a Photocontrolled Cytosine Deaminase.

Authors:  Kristin M Blacklock; Brahm J Yachnin; G Andrew Woolley; Sagar D Khare
Journal:  J Am Chem Soc       Date:  2017-12-28       Impact factor: 15.419

Review 10.  Shedding light on nanomedicine.

Authors:  Rong Tong; Daniel S Kohane
Journal:  Wiley Interdiscip Rev Nanomed Nanobiotechnol       Date:  2012-08-09
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