Literature DB >> 20650869

Closing the scientific loop: bridging correlation and causality in the petaflop age.

Gary An1.   

Abstract

Advances in computing capability offer the biomedical research community the prospect of creating simulations at a previously unimaginable scale. A diagnostic analysis of the underpinnings of the translational dilemma suggests that the current high-throughput, data-rich research environment has led to an imbalance in the relationship between determinations of correlation and the evaluation of causality. Here I describe the use of high-performance computing technologies to facilitate high-throughput hypothesis evaluation combined with an evolutionary paradigm for the advancement of scientific knowledge. This combination provides a roadmap for closing the scientific loop between correlation and causality, a necessary step if translational endeavors are to succeed.

Mesh:

Year:  2010        PMID: 20650869     DOI: 10.1126/scitranslmed.3000390

Source DB:  PubMed          Journal:  Sci Transl Med        ISSN: 1946-6234            Impact factor:   17.956


  25 in total

1.  Diving through the "-omics": the case for deep phenotyping and systems epidemiology.

Authors:  Robin Haring; Henri Wallaschofski
Journal:  OMICS       Date:  2012-02-09

2.  A proposal for augmenting biological model construction with a semi-intelligent computational modeling assistant.

Authors:  Scott Christley; Gary An
Journal:  Comput Math Organ Theory       Date:  2012-12       Impact factor: 2.023

Review 3.  From data patterns to mechanistic models in acute critical illness.

Authors:  Jean-Marie Aerts; Wassim M Haddad; Gary An; Yoram Vodovotz
Journal:  J Crit Care       Date:  2014-03-29       Impact factor: 3.425

4.  Inflammation and Disease: Modelling and Modulation of the Inflammatory Response to Alleviate Critical Illness.

Authors:  Judy D Day; Chase Cockrell; Rami Namas; Ruben Zamora; Gary An; Yoram Vodovotz
Journal:  Curr Opin Syst Biol       Date:  2018-08-23

Review 5.  Sepsis: from pattern to mechanism and back.

Authors:  Gary An; Rami A Namas; Yoram Vodovotz
Journal:  Crit Rev Biomed Eng       Date:  2012

6.  Agent-based model of epithelial host-pathogen interactions in anastomotic leak.

Authors:  Jordan R Stern; Andrea D Olivas; Vesta Valuckaite; Olga Zaborina; John C Alverdy; Gary An
Journal:  J Surg Res       Date:  2013-01-01       Impact factor: 2.192

Review 7.  Providing data science support for systems pharmacology and its implications to drug discovery.

Authors:  Thomas Hart; Lei Xie
Journal:  Expert Opin Drug Discov       Date:  2016-01-09       Impact factor: 6.098

8.  In Silico Augmentation of the Drug Development Pipeline: Examples from the study of Acute Inflammation.

Authors:  Gary An; John Bartels; Yoram Vodovotz
Journal:  Drug Dev Res       Date:  2011-03-01       Impact factor: 4.360

9.  Sepsis reconsidered: Identifying novel metrics for behavioral landscape characterization with a high-performance computing implementation of an agent-based model.

Authors:  Chase Cockrell; Gary An
Journal:  J Theor Biol       Date:  2017-07-18       Impact factor: 2.691

Review 10.  In silico modeling: methods and applications to trauma and sepsis.

Authors:  Yoram Vodovotz; Timothy R Billiar
Journal:  Crit Care Med       Date:  2013-08       Impact factor: 7.598

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.