Literature DB >> 20627155

Single-particle tracking photoactivated localization microscopy for mapping single-molecule dynamics.

Suliana Manley1, Jennifer M Gillette, Jennifer Lippincott-Schwartz.   

Abstract

Recent developments in single-molecule localization techniques using photoactivatable fluorescent proteins have allowed the probing of single-molecule motion in a living cell with high specificity, millisecond time resolution, and nanometer spatial resolution. Analyzing the dynamics of individual molecules at high densities in this manner promises to provide new insights into the mechanisms of many biological processes, including protein heterogeneity in the plasma membrane, the dynamics of cytoskeletal flow, and clustering of receptor complexes in response to signaling cues. Here we describe the method of single-molecule tracking photoactivated localization microscopy (sptPALM) and discuss how its use can contribute to a quantitative understanding of fundamental cellular processes. Copyright (c) 2010 Elsevier Inc. All rights reserved.

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Year:  2010        PMID: 20627155      PMCID: PMC3690942          DOI: 10.1016/S0076-6879(10)75005-9

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  33 in total

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Authors:  Lawrence W Miller; Yunfei Cai; Michael P Sheetz; Virginia W Cornish
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2.  Sub-diffraction-limit imaging by stochastic optical reconstruction microscopy (STORM).

Authors:  Michael J Rust; Mark Bates; Xiaowei Zhuang
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3.  Imaging intracellular fluorescent proteins at nanometer resolution.

Authors:  Eric Betzig; George H Patterson; Rachid Sougrat; O Wolf Lindwasser; Scott Olenych; Juan S Bonifacino; Michael W Davidson; Jennifer Lippincott-Schwartz; Harald F Hess
Journal:  Science       Date:  2006-08-10       Impact factor: 47.728

Review 4.  Advances in fluorescent protein technology.

Authors:  Nathan C Shaner; George H Patterson; Michael W Davidson
Journal:  J Cell Sci       Date:  2007-12-15       Impact factor: 5.285

5.  An engineered protein tag for multiprotein labeling in living cells.

Authors:  Arnaud Gautier; Alexandre Juillerat; Christian Heinis; Ivan Reis Corrêa; Maik Kindermann; Florent Beaufils; Kai Johnsson
Journal:  Chem Biol       Date:  2008-02

6.  High-density mapping of single-molecule trajectories with photoactivated localization microscopy.

Authors:  Suliana Manley; Jennifer M Gillette; George H Patterson; Hari Shroff; Harald F Hess; Eric Betzig; Jennifer Lippincott-Schwartz
Journal:  Nat Methods       Date:  2008-01-13       Impact factor: 28.547

7.  Live-cell photoactivated localization microscopy of nanoscale adhesion dynamics.

Authors:  Hari Shroff; Catherine G Galbraith; James A Galbraith; Eric Betzig
Journal:  Nat Methods       Date:  2008-04-13       Impact factor: 28.547

8.  Investigating intracellular dynamics of FtsZ cytoskeleton with photoactivation single-molecule tracking.

Authors:  Lili Niu; Ji Yu
Journal:  Biophys J       Date:  2008-04-04       Impact factor: 4.033

9.  Reversible single-molecule photoswitching in the GFP-like fluorescent protein Dronpa.

Authors:  Satoshi Habuchi; Ryoko Ando; Peter Dedecker; Wendy Verheijen; Hideaki Mizuno; Atsushi Miyawaki; Johan Hofkens
Journal:  Proc Natl Acad Sci U S A       Date:  2005-06-22       Impact factor: 11.205

10.  Robust single-particle tracking in live-cell time-lapse sequences.

Authors:  Khuloud Jaqaman; Dinah Loerke; Marcel Mettlen; Hirotaka Kuwata; Sergio Grinstein; Sandra L Schmid; Gaudenz Danuser
Journal:  Nat Methods       Date:  2008-07-20       Impact factor: 28.547

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  24 in total

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Journal:  Nat Rev Mol Cell Biol       Date:  2011-09-23       Impact factor: 94.444

2.  Rapid, accurate particle tracking by calculation of radial symmetry centers.

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Journal:  Nat Methods       Date:  2012-06-10       Impact factor: 28.547

3.  Photoactivated Localization Microscopy with Bimolecular Fluorescence Complementation (BiFC-PALM).

Authors:  Andrew Nickerson; Tao Huang; Li-Jung Lin; Xioalin Nan
Journal:  J Vis Exp       Date:  2015-12-22       Impact factor: 1.355

4.  Distinct stages of stimulated FcεRI receptor clustering and immobilization are identified through superresolution imaging.

Authors:  Sarah A Shelby; David Holowka; Barbara Baird; Sarah L Veatch
Journal:  Biophys J       Date:  2013-11-19       Impact factor: 4.033

Review 5.  Phototransformable fluorescent proteins: which one for which application?

Authors:  Virgile Adam
Journal:  Histochem Cell Biol       Date:  2014-02-13       Impact factor: 4.304

Review 6.  Dynamics of lesion processing by bacterial nucleotide excision repair proteins.

Authors:  Neil M Kad; Bennett Van Houten
Journal:  Prog Mol Biol Transl Sci       Date:  2012       Impact factor: 3.622

Review 7.  Chromophore transformations in red fluorescent proteins.

Authors:  Fedor V Subach; Vladislav V Verkhusha
Journal:  Chem Rev       Date:  2012-05-04       Impact factor: 60.622

8.  Silver Ions Caused Faster Diffusive Dynamics of Histone-Like Nucleoid-Structuring Proteins in Live Bacteria.

Authors:  Asmaa A Sadoon; Prabhat Khadka; Jack Freeland; Ravi Kumar Gundampati; Ryan H Manso; Mason Ruiz; Venkata R Krishnamurthi; Suresh Kumar Thallapuranam; Jingyi Chen; Yong Wang
Journal:  Appl Environ Microbiol       Date:  2020-03-02       Impact factor: 4.792

Review 9.  Functioning nanomachines seen in real-time in living bacteria using single-molecule and super-resolution fluorescence imaging.

Authors:  Sheng-Wen Chiu; Mark C Leake
Journal:  Int J Mol Sci       Date:  2011-04-15       Impact factor: 5.923

Review 10.  How Single-Molecule Localization Microscopy Expanded Our Mechanistic Understanding of RNA Polymerase II Transcription.

Authors:  Peter Hoboth; Ondřej Šebesta; Pavel Hozák
Journal:  Int J Mol Sci       Date:  2021-06-22       Impact factor: 5.923

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